Experiment: m.b. A22 0.04 mg/ml
Only strains with sufficient reads to estimate fitness are shown,
but the strain fitness values are still rather noisy and may be biased towards zero.
Strains near the edge of a gene are not shown as being associated with that
gene (they are in grey).
Strains in the central 10-90% of a gene are color coded by the insertion's strand.
Usually, "+" means that the selectable marker is encoded on the forward strand,
i.e., transcribed rightward.
500 nt CA264_21385 and CA264_21390 are separated by 1 nucleotides CA264_21390 and CA264_21395 are separated by 88 nucleotides CA264_21395 and CA264_21400 are separated by 480 nucleotides
CA264_21385: CA264_21385 - hypothetical protein, at 140,995 to 141,591
_21385
CA264_21390: CA264_21390 - hypothetical protein, at 141,593 to 142,033
_21390
CA264_21395: CA264_21395 - hypothetical protein, at 142,122 to 142,967
_21395
CA264_21400: CA264_21400 - hypothetical protein, at 143,448 to 145,292
_21400
Position (kb)
142
143 Strain fitness (log2 ratio)
-2
-1
0
1 at 141.266 kb on - strand, within CA264_21385 at 141.266 kb on - strand, within CA264_21385 at 141.266 kb on - strand, within CA264_21385 at 141.280 kb on - strand, within CA264_21385 at 141.385 kb on - strand, within CA264_21385 at 141.406 kb on + strand, within CA264_21385 at 141.486 kb on - strand, within CA264_21385 at 142.189 kb on + strand at 142.190 kb on - strand at 142.209 kb on + strand, within CA264_21395 at 142.250 kb on - strand, within CA264_21395 at 142.253 kb on + strand, within CA264_21395 at 142.253 kb on + strand, within CA264_21395 at 142.254 kb on - strand, within CA264_21395 at 142.277 kb on - strand, within CA264_21395 at 142.322 kb on + strand, within CA264_21395 at 142.381 kb on - strand, within CA264_21395 at 142.391 kb on + strand, within CA264_21395 at 142.612 kb on + strand, within CA264_21395 at 142.717 kb on + strand, within CA264_21395 at 142.752 kb on - strand, within CA264_21395 at 142.752 kb on - strand, within CA264_21395 at 142.777 kb on + strand, within CA264_21395 at 142.778 kb on - strand, within CA264_21395 at 142.778 kb on - strand, within CA264_21395 at 142.782 kb on + strand, within CA264_21395 at 142.782 kb on + strand, within CA264_21395 at 142.789 kb on + strand, within CA264_21395 at 142.852 kb on + strand, within CA264_21395 at 142.852 kb on + strand, within CA264_21395 at 142.853 kb on - strand, within CA264_21395 at 142.937 kb on - strand at 142.957 kb on - strand at 142.959 kb on + strand at 142.972 kb on + strand at 142.976 kb on - strand at 143.038 kb on + strand at 143.098 kb on + strand at 143.098 kb on + strand at 143.101 kb on + strand at 143.101 kb on + strand at 143.137 kb on + strand at 143.217 kb on + strand at 143.218 kb on - strand at 143.353 kb on - strand at 143.437 kb on + strand at 143.439 kb on + strand at 143.439 kb on + strand at 143.507 kb on + strand at 143.507 kb on + strand at 143.509 kb on + strand at 143.517 kb on + strand at 143.518 kb on - strand at 143.518 kb on - strand at 143.614 kb on - strand at 143.614 kb on - strand at 143.614 kb on - strand at 143.614 kb on - strand at 143.622 kb on - strand at 143.654 kb on + strand, within CA264_21400 at 143.661 kb on - strand, within CA264_21400 at 143.724 kb on - strand, within CA264_21400 at 143.739 kb on + strand, within CA264_21400 at 143.769 kb on + strand, within CA264_21400 at 143.770 kb on - strand, within CA264_21400 at 143.770 kb on - strand, within CA264_21400 at 143.826 kb on + strand, within CA264_21400 at 143.840 kb on + strand, within CA264_21400 at 143.841 kb on - strand, within CA264_21400 at 143.841 kb on - strand, within CA264_21400 at 143.846 kb on - strand, within CA264_21400 at 143.850 kb on - strand, within CA264_21400 at 143.861 kb on - strand, within CA264_21400
Per-strain Table
Position Strand Gene LocusTag Fraction m.b. A22 0.04 mg/ml remove 141,266 - CA264_21385 0.45 +0.5 141,266 - CA264_21385 0.45 +0.1 141,266 - CA264_21385 0.45 +0.1 141,280 - CA264_21385 0.48 +1.5 141,385 - CA264_21385 0.65 +0.5 141,406 + CA264_21385 0.69 +0.9 141,486 - CA264_21385 0.82 -0.3 142,189 + -1.2 142,190 - +0.9 142,209 + CA264_21395 0.10 -0.3 142,250 - CA264_21395 0.15 -0.6 142,253 + CA264_21395 0.15 -0.4 142,253 + CA264_21395 0.15 +0.2 142,254 - CA264_21395 0.16 +0.3 142,277 - CA264_21395 0.18 +0.1 142,322 + CA264_21395 0.24 +0.7 142,381 - CA264_21395 0.31 +0.1 142,391 + CA264_21395 0.32 +0.1 142,612 + CA264_21395 0.58 -0.7 142,717 + CA264_21395 0.70 -1.3 142,752 - CA264_21395 0.74 -1.1 142,752 - CA264_21395 0.74 -0.3 142,777 + CA264_21395 0.77 -0.4 142,778 - CA264_21395 0.78 -0.5 142,778 - CA264_21395 0.78 -1.3 142,782 + CA264_21395 0.78 -0.3 142,782 + CA264_21395 0.78 -1.1 142,789 + CA264_21395 0.79 -1.2 142,852 + CA264_21395 0.86 -1.0 142,852 + CA264_21395 0.86 -1.1 142,853 - CA264_21395 0.86 +0.1 142,937 - +0.3 142,957 - -0.1 142,959 + +0.1 142,972 + -1.0 142,976 - +0.6 143,038 + -0.5 143,098 + -0.1 143,098 + -0.1 143,101 + +0.3 143,101 + -1.1 143,137 + -1.3 143,217 + -1.6 143,218 - +0.3 143,353 - -0.5 143,437 + -0.3 143,439 + -0.4 143,439 + -1.6 143,507 + -0.7 143,507 + -0.6 143,509 + -1.0 143,517 + -1.3 143,518 - -1.0 143,518 - +0.1 143,614 - -2.1 143,614 - +0.3 143,614 - +1.4 143,614 - -0.4 143,622 - -0.4 143,654 + CA264_21400 0.11 -0.9 143,661 - CA264_21400 0.12 -0.4 143,724 - CA264_21400 0.15 +0.4 143,739 + CA264_21400 0.16 -0.2 143,769 + CA264_21400 0.17 -0.1 143,770 - CA264_21400 0.17 +0.9 143,770 - CA264_21400 0.17 +0.9 143,826 + CA264_21400 0.20 -1.1 143,840 + CA264_21400 0.21 -1.3 143,841 - CA264_21400 0.21 -0.7 143,841 - CA264_21400 0.21 -1.4 143,846 - CA264_21400 0.22 -0.7 143,850 - CA264_21400 0.22 -0.4 143,861 - CA264_21400 0.22 -1.3
Or see this region's nucleotide sequence