Experiment: m.b. A22 0.04 mg/ml
Only strains with sufficient reads to estimate fitness are shown,
but the strain fitness values are still rather noisy and may be biased towards zero.
Strains near the edge of a gene are not shown as being associated with that
gene (they are in grey).
Strains in the central 10-90% of a gene are color coded by the insertion's strand.
Usually, "+" means that the selectable marker is encoded on the forward strand,
i.e., transcribed rightward.
500 nt CA264_21035 and CA264_21040 overlap by 4 nucleotides CA264_21040 and CA264_21045 are separated by 850 nucleotides
CA264_21035: CA264_21035 - mobilization protein, at 67,705 to 69,672
_21035
CA264_21040: CA264_21040 - transcriptional regulator, at 69,669 to 70,019
_21040
CA264_21045: CA264_21045 - hypothetical protein, at 70,870 to 71,220
_21045
Position (kb)
69
70
71 Strain fitness (log2 ratio)
-3
-2
-1
0
1 at 68.686 kb on + strand, within CA264_21035 at 68.735 kb on + strand, within CA264_21035 at 68.736 kb on - strand, within CA264_21035 at 68.749 kb on - strand, within CA264_21035 at 68.758 kb on + strand, within CA264_21035 at 68.758 kb on + strand, within CA264_21035 at 68.759 kb on - strand, within CA264_21035 at 68.830 kb on + strand, within CA264_21035 at 68.830 kb on + strand, within CA264_21035 at 68.830 kb on + strand, within CA264_21035 at 68.830 kb on + strand, within CA264_21035 at 68.831 kb on - strand, within CA264_21035 at 68.832 kb on + strand, within CA264_21035 at 68.832 kb on + strand, within CA264_21035 at 68.833 kb on - strand, within CA264_21035 at 68.883 kb on + strand, within CA264_21035 at 69.109 kb on - strand, within CA264_21035 at 69.115 kb on + strand, within CA264_21035 at 69.116 kb on - strand, within CA264_21035 at 69.116 kb on - strand, within CA264_21035 at 69.119 kb on + strand, within CA264_21035 at 69.119 kb on + strand, within CA264_21035 at 69.119 kb on + strand, within CA264_21035 at 69.120 kb on - strand, within CA264_21035 at 69.120 kb on - strand, within CA264_21035 at 69.164 kb on + strand, within CA264_21035 at 69.164 kb on + strand, within CA264_21035 at 69.164 kb on + strand, within CA264_21035 at 69.164 kb on + strand, within CA264_21035 at 69.165 kb on - strand, within CA264_21035 at 69.192 kb on - strand, within CA264_21035 at 69.257 kb on + strand, within CA264_21035 at 69.258 kb on - strand, within CA264_21035 at 69.279 kb on + strand, within CA264_21035 at 69.315 kb on + strand, within CA264_21035 at 69.361 kb on - strand, within CA264_21035 at 69.449 kb on + strand, within CA264_21035 at 69.449 kb on + strand, within CA264_21035 at 69.469 kb on + strand, within CA264_21035 at 69.469 kb on + strand, within CA264_21035 at 69.470 kb on - strand, within CA264_21035 at 69.481 kb on + strand at 69.481 kb on + strand at 69.530 kb on + strand at 69.550 kb on + strand at 69.631 kb on - strand at 69.662 kb on + strand at 69.669 kb on - strand at 69.676 kb on + strand at 69.682 kb on + strand at 69.778 kb on + strand, within CA264_21040 at 69.823 kb on + strand, within CA264_21040 at 69.823 kb on + strand, within CA264_21040 at 69.997 kb on + strand at 70.017 kb on + strand at 70.018 kb on - strand at 70.051 kb on - strand at 70.060 kb on + strand at 70.063 kb on + strand at 70.063 kb on + strand at 70.065 kb on + strand at 70.160 kb on - strand at 70.199 kb on - strand at 70.343 kb on + strand at 70.343 kb on + strand at 70.344 kb on - strand at 70.361 kb on - strand at 70.370 kb on + strand at 70.370 kb on + strand at 70.391 kb on + strand at 70.399 kb on + strand at 70.400 kb on - strand at 70.402 kb on - strand at 70.420 kb on - strand at 70.458 kb on - strand at 70.500 kb on + strand at 70.500 kb on + strand at 70.500 kb on + strand at 70.515 kb on + strand at 70.533 kb on - strand at 70.571 kb on - strand at 70.574 kb on - strand at 70.579 kb on + strand at 70.581 kb on + strand at 70.582 kb on - strand at 70.582 kb on - strand at 70.582 kb on - strand at 70.585 kb on + strand at 70.585 kb on + strand at 70.586 kb on - strand at 70.586 kb on - strand at 70.586 kb on - strand at 70.587 kb on + strand at 70.587 kb on + strand at 70.587 kb on + strand at 70.588 kb on - strand at 70.588 kb on - strand at 70.631 kb on - strand at 70.631 kb on - strand at 70.634 kb on + strand at 70.635 kb on - strand at 70.635 kb on - strand at 70.638 kb on - strand at 70.638 kb on - strand at 70.641 kb on + strand at 70.641 kb on + strand at 70.642 kb on - strand at 70.671 kb on + strand at 70.671 kb on + strand at 70.672 kb on - strand at 70.691 kb on - strand at 70.701 kb on + strand at 70.701 kb on + strand at 70.702 kb on - strand at 70.705 kb on + strand at 70.706 kb on - strand at 70.706 kb on - strand at 70.712 kb on + strand at 70.712 kb on + strand at 70.712 kb on + strand at 70.712 kb on + strand at 70.713 kb on - strand at 70.720 kb on + strand at 70.721 kb on - strand at 70.727 kb on - strand at 70.727 kb on - strand at 70.743 kb on + strand at 70.744 kb on - strand at 70.744 kb on - strand at 70.744 kb on - strand at 70.759 kb on - strand at 70.803 kb on + strand at 70.804 kb on - strand at 70.824 kb on + strand at 70.837 kb on - strand at 70.871 kb on + strand at 70.876 kb on + strand at 70.877 kb on - strand at 70.880 kb on + strand at 70.881 kb on - strand at 70.974 kb on + strand, within CA264_21045
Per-strain Table
Position Strand Gene LocusTag Fraction m.b. A22 0.04 mg/ml remove 68,686 + CA264_21035 0.50 -0.3 68,735 + CA264_21035 0.52 +0.1 68,736 - CA264_21035 0.52 +1.2 68,749 - CA264_21035 0.53 -0.1 68,758 + CA264_21035 0.54 -0.3 68,758 + CA264_21035 0.54 -0.1 68,759 - CA264_21035 0.54 +0.3 68,830 + CA264_21035 0.57 +0.1 68,830 + CA264_21035 0.57 +1.4 68,830 + CA264_21035 0.57 -1.4 68,830 + CA264_21035 0.57 -0.0 68,831 - CA264_21035 0.57 +0.5 68,832 + CA264_21035 0.57 +0.4 68,832 + CA264_21035 0.57 -0.3 68,833 - CA264_21035 0.57 +0.6 68,883 + CA264_21035 0.60 +0.7 69,109 - CA264_21035 0.71 +0.6 69,115 + CA264_21035 0.72 -0.3 69,116 - CA264_21035 0.72 -0.1 69,116 - CA264_21035 0.72 +1.1 69,119 + CA264_21035 0.72 +1.0 69,119 + CA264_21035 0.72 +0.5 69,119 + CA264_21035 0.72 +0.0 69,120 - CA264_21035 0.72 +0.4 69,120 - CA264_21035 0.72 +0.8 69,164 + CA264_21035 0.74 -0.0 69,164 + CA264_21035 0.74 -0.1 69,164 + CA264_21035 0.74 -0.7 69,164 + CA264_21035 0.74 -0.4 69,165 - CA264_21035 0.74 +0.1 69,192 - CA264_21035 0.76 +0.0 69,257 + CA264_21035 0.79 -1.2 69,258 - CA264_21035 0.79 -0.0 69,279 + CA264_21035 0.80 -0.3 69,315 + CA264_21035 0.82 +0.3 69,361 - CA264_21035 0.84 +0.5 69,449 + CA264_21035 0.89 -0.3 69,449 + CA264_21035 0.89 +0.1 69,469 + CA264_21035 0.90 -1.2 69,469 + CA264_21035 0.90 +0.5 69,470 - CA264_21035 0.90 -0.9 69,481 + -0.7 69,481 + +0.3 69,530 + -0.5 69,550 + -1.0 69,631 - -0.5 69,662 + -0.0 69,669 - -0.6 69,676 + +1.0 69,682 + -1.6 69,778 + CA264_21040 0.31 -0.3 69,823 + CA264_21040 0.44 -0.0 69,823 + CA264_21040 0.44 +0.3 69,997 + +0.3 70,017 + -0.9 70,018 - +0.5 70,051 - -1.0 70,060 + +0.4 70,063 + -0.1 70,063 + +0.6 70,065 + -1.2 70,160 - +0.1 70,199 - -0.4 70,343 + +0.0 70,343 + -1.6 70,344 - -0.2 70,361 - -0.8 70,370 + -1.3 70,370 + -0.4 70,391 + -1.1 70,399 + -1.1 70,400 - -1.4 70,402 - -0.7 70,420 - -0.4 70,458 - -1.1 70,500 + -1.8 70,500 + -2.7 70,500 + -0.9 70,515 + +0.4 70,533 - -1.4 70,571 - -0.6 70,574 - -0.3 70,579 + -1.5 70,581 + -0.3 70,582 - -0.3 70,582 - -0.0 70,582 - -0.5 70,585 + -0.0 70,585 + -1.7 70,586 - -1.0 70,586 - +0.6 70,586 - -1.1 70,587 + -1.0 70,587 + -0.8 70,587 + -0.5 70,588 - -0.4 70,588 - -0.6 70,631 - -2.1 70,631 - -0.9 70,634 + -0.7 70,635 - -1.1 70,635 - -0.5 70,638 - -1.4 70,638 - +0.2 70,641 + -1.8 70,641 + -1.9 70,642 - -0.9 70,671 + -2.0 70,671 + -1.4 70,672 - -0.8 70,691 - -3.0 70,701 + -2.0 70,701 + -2.9 70,702 - -0.8 70,705 + -2.3 70,706 - -0.3 70,706 - -1.2 70,712 + -2.3 70,712 + -0.6 70,712 + -1.7 70,712 + -1.3 70,713 - +0.6 70,720 + -0.7 70,721 - -2.0 70,727 - -2.0 70,727 - -0.7 70,743 + -0.8 70,744 - -1.3 70,744 - -0.5 70,744 - -0.6 70,759 - -1.4 70,803 + -1.3 70,804 - -1.1 70,824 + -2.2 70,837 - -0.9 70,871 + -0.4 70,876 + -1.8 70,877 - -1.7 70,880 + -1.8 70,881 - +0.0 70,974 + CA264_21045 0.30 -2.8
Or see this region's nucleotide sequence