Strain Fitness in Pontibacter actiniarum KMM 6156, DSM 19842 around CA264_18815

Experiment: m.b. A22 0.04 mg/ml

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Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

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500 ntCA264_18810 and CA264_18815 are separated by 23 nucleotidesCA264_18815 and CA264_18820 are separated by 219 nucleotidesCA264_18820 and CA264_18825 are separated by 201 nucleotides CA264_18810: CA264_18810 - hypothetical protein, at 4,367,096 to 4,368,058 _18810 CA264_18815: CA264_18815 - DHH family phosphoesterase, at 4,368,082 to 4,369,104 _18815 CA264_18820: CA264_18820 - nucleoside-diphosphate kinase, at 4,369,324 to 4,369,743 _18820 CA264_18825: CA264_18825 - hypothetical protein, at 4,369,945 to 4,370,319 _18825 Position (kb) 4368 4369 4370Strain fitness (log2 ratio) -3 -2 -1 0 1at 4367.093 kb on + strandat 4367.094 kb on - strandat 4367.094 kb on - strandat 4367.141 kb on - strandat 4367.361 kb on + strand, within CA264_18810at 4367.361 kb on + strand, within CA264_18810at 4367.366 kb on + strand, within CA264_18810at 4367.366 kb on + strand, within CA264_18810at 4367.417 kb on + strand, within CA264_18810at 4367.425 kb on - strand, within CA264_18810at 4367.479 kb on - strand, within CA264_18810at 4367.479 kb on - strand, within CA264_18810at 4367.608 kb on + strand, within CA264_18810at 4367.838 kb on + strand, within CA264_18810at 4367.855 kb on + strand, within CA264_18810at 4367.856 kb on - strand, within CA264_18810at 4367.881 kb on + strand, within CA264_18810at 4367.948 kb on - strand, within CA264_18810at 4367.968 kb on + strandat 4367.973 kb on + strandat 4368.049 kb on + strandat 4368.049 kb on + strandat 4368.049 kb on + strandat 4368.060 kb on + strandat 4368.060 kb on + strandat 4368.060 kb on + strandat 4369.115 kb on + strandat 4369.131 kb on + strandat 4369.139 kb on + strandat 4369.140 kb on - strandat 4369.163 kb on + strandat 4369.202 kb on + strandat 4369.203 kb on - strandat 4369.232 kb on + strandat 4369.238 kb on - strandat 4369.238 kb on - strandat 4369.239 kb on + strandat 4369.255 kb on + strandat 4369.255 kb on + strandat 4369.255 kb on + strandat 4369.255 kb on + strandat 4369.255 kb on + strandat 4369.256 kb on - strandat 4369.256 kb on - strandat 4369.256 kb on - strandat 4369.256 kb on - strandat 4369.258 kb on - strandat 4369.258 kb on - strandat 4369.287 kb on + strandat 4369.299 kb on + strandat 4369.757 kb on + strandat 4369.782 kb on + strandat 4369.782 kb on + strandat 4369.783 kb on - strandat 4369.813 kb on + strandat 4369.831 kb on - strandat 4369.946 kb on + strandat 4369.946 kb on + strandat 4370.008 kb on - strand, within CA264_18825at 4370.008 kb on - strand, within CA264_18825at 4370.024 kb on + strand, within CA264_18825at 4370.096 kb on - strand, within CA264_18825at 4370.103 kb on - strand, within CA264_18825at 4370.103 kb on - strand, within CA264_18825

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Per-strain Table

Position Strand Gene LocusTag Fraction m.b. A22 0.04 mg/ml
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4,367,093 + -0.8
4,367,094 - +0.6
4,367,094 - +0.9
4,367,141 - +0.0
4,367,361 + CA264_18810 0.28 -1.5
4,367,361 + CA264_18810 0.28 -0.9
4,367,366 + CA264_18810 0.28 +0.2
4,367,366 + CA264_18810 0.28 +0.7
4,367,417 + CA264_18810 0.33 -1.9
4,367,425 - CA264_18810 0.34 -0.3
4,367,479 - CA264_18810 0.40 -0.3
4,367,479 - CA264_18810 0.40 -0.1
4,367,608 + CA264_18810 0.53 -1.7
4,367,838 + CA264_18810 0.77 -1.5
4,367,855 + CA264_18810 0.79 -1.5
4,367,856 - CA264_18810 0.79 +0.1
4,367,881 + CA264_18810 0.82 -1.4
4,367,948 - CA264_18810 0.88 -0.0
4,367,968 + -1.7
4,367,973 + -2.8
4,368,049 + -0.4
4,368,049 + -0.8
4,368,049 + +0.1
4,368,060 + -0.2
4,368,060 + -0.0
4,368,060 + +0.2
4,369,115 + +0.0
4,369,131 + +0.4
4,369,139 + -0.8
4,369,140 - -2.5
4,369,163 + +1.5
4,369,202 + +0.2
4,369,203 - -2.4
4,369,232 + +0.6
4,369,238 - -2.2
4,369,238 - -2.0
4,369,239 + -2.0
4,369,255 + -0.6
4,369,255 + +0.4
4,369,255 + +1.3
4,369,255 + -0.4
4,369,255 + +0.6
4,369,256 - -2.4
4,369,256 - -2.0
4,369,256 - -2.4
4,369,256 - -0.7
4,369,258 - -2.5
4,369,258 - -2.3
4,369,287 + -0.2
4,369,299 + -0.1
4,369,757 + +0.3
4,369,782 + +0.7
4,369,782 + +0.4
4,369,783 - -0.4
4,369,813 + -0.3
4,369,831 - -0.9
4,369,946 + +0.1
4,369,946 + -1.0
4,370,008 - CA264_18825 0.17 +0.5
4,370,008 - CA264_18825 0.17 +0.8
4,370,024 + CA264_18825 0.21 -1.0
4,370,096 - CA264_18825 0.40 +0.7
4,370,103 - CA264_18825 0.42 +1.0
4,370,103 - CA264_18825 0.42 +0.7

Or see this region's nucleotide sequence