Experiment: m.b. A22 0.04 mg/ml
Only strains with sufficient reads to estimate fitness are shown,
but the strain fitness values are still rather noisy and may be biased towards zero.
Strains near the edge of a gene are not shown as being associated with that
gene (they are in grey).
Strains in the central 10-90% of a gene are color coded by the insertion's strand.
Usually, "+" means that the selectable marker is encoded on the forward strand,
i.e., transcribed rightward.
500 nt CA264_14755 and CA264_14760 are separated by 200 nucleotides
CA264_14755: CA264_14755 - hypothetical protein, at 3,467,287 to 3,467,736
_14755
CA264_14760: CA264_14760 - uracil phosphoribosyltransferase, at 3,467,937 to 3,468,593
_14760
Position (kb)
3467
3468 Strain fitness (log2 ratio)
-3
-2
-1
0
1
2 at 3466.363 kb on + strand at 3466.377 kb on + strand at 3466.377 kb on + strand at 3466.429 kb on - strand at 3466.436 kb on - strand at 3466.436 kb on - strand at 3466.439 kb on + strand at 3466.439 kb on + strand at 3466.439 kb on + strand at 3466.440 kb on - strand at 3466.440 kb on - strand at 3466.441 kb on + strand at 3466.441 kb on + strand at 3466.442 kb on - strand at 3466.442 kb on - strand at 3466.463 kb on + strand at 3466.463 kb on + strand at 3466.536 kb on + strand at 3466.537 kb on - strand at 3466.597 kb on - strand at 3466.600 kb on - strand at 3466.600 kb on - strand at 3466.631 kb on + strand at 3466.631 kb on + strand at 3466.661 kb on - strand at 3466.661 kb on - strand at 3466.661 kb on - strand at 3466.667 kb on - strand at 3466.713 kb on + strand at 3466.713 kb on + strand at 3466.713 kb on + strand at 3466.713 kb on + strand at 3466.719 kb on + strand at 3466.753 kb on - strand at 3466.772 kb on + strand at 3466.809 kb on + strand at 3466.884 kb on - strand at 3466.988 kb on + strand at 3466.988 kb on + strand at 3466.993 kb on + strand at 3466.994 kb on - strand at 3467.003 kb on + strand at 3467.013 kb on - strand at 3467.033 kb on - strand at 3467.056 kb on + strand at 3467.078 kb on - strand at 3467.078 kb on - strand at 3467.102 kb on + strand at 3467.103 kb on - strand at 3467.103 kb on - strand at 3467.109 kb on - strand at 3467.109 kb on - strand at 3467.123 kb on + strand at 3467.184 kb on - strand at 3467.230 kb on - strand at 3467.275 kb on + strand at 3467.403 kb on + strand, within CA264_14755 at 3467.404 kb on - strand, within CA264_14755 at 3467.434 kb on + strand, within CA264_14755 at 3467.434 kb on + strand, within CA264_14755 at 3467.434 kb on + strand, within CA264_14755 at 3467.435 kb on - strand, within CA264_14755 at 3467.449 kb on + strand, within CA264_14755 at 3467.452 kb on - strand, within CA264_14755 at 3467.562 kb on + strand, within CA264_14755 at 3467.612 kb on - strand, within CA264_14755 at 3467.612 kb on - strand, within CA264_14755 at 3467.631 kb on + strand, within CA264_14755 at 3467.631 kb on + strand, within CA264_14755 at 3467.659 kb on + strand, within CA264_14755 at 3467.663 kb on + strand, within CA264_14755 at 3467.667 kb on + strand, within CA264_14755 at 3467.668 kb on - strand, within CA264_14755 at 3467.746 kb on + strand at 3467.770 kb on - strand at 3467.811 kb on + strand at 3467.812 kb on - strand at 3467.816 kb on + strand at 3467.817 kb on - strand at 3467.817 kb on - strand at 3467.817 kb on - strand at 3467.817 kb on - strand at 3467.817 kb on - strand at 3467.819 kb on - strand at 3467.908 kb on + strand at 3467.909 kb on - strand at 3467.941 kb on - strand at 3467.941 kb on - strand at 3467.941 kb on - strand at 3467.993 kb on - strand at 3467.993 kb on - strand at 3468.033 kb on + strand, within CA264_14760 at 3468.033 kb on + strand, within CA264_14760 at 3468.034 kb on - strand, within CA264_14760 at 3468.143 kb on - strand, within CA264_14760 at 3468.143 kb on - strand, within CA264_14760 at 3468.143 kb on - strand, within CA264_14760 at 3468.215 kb on + strand, within CA264_14760 at 3468.292 kb on + strand, within CA264_14760 at 3468.293 kb on - strand, within CA264_14760 at 3468.293 kb on - strand, within CA264_14760 at 3468.326 kb on - strand, within CA264_14760 at 3468.428 kb on - strand, within CA264_14760 at 3468.440 kb on + strand, within CA264_14760 at 3468.444 kb on + strand, within CA264_14760 at 3468.539 kb on - strand at 3468.576 kb on + strand at 3468.576 kb on + strand at 3468.576 kb on + strand at 3468.577 kb on - strand at 3468.577 kb on - strand at 3468.577 kb on - strand at 3468.611 kb on - strand at 3468.616 kb on - strand
Per-strain Table
Position Strand Gene LocusTag Fraction m.b. A22 0.04 mg/ml remove 3,466,363 + +0.2 3,466,377 + +0.4 3,466,377 + -1.1 3,466,429 - +0.5 3,466,436 - +0.1 3,466,436 - -0.8 3,466,439 + -0.6 3,466,439 + -2.2 3,466,439 + -1.0 3,466,440 - -0.2 3,466,440 - +0.2 3,466,441 + +0.0 3,466,441 + -0.3 3,466,442 - -1.1 3,466,442 - -0.8 3,466,463 + -1.0 3,466,463 + -1.1 3,466,536 + -0.9 3,466,537 - -1.1 3,466,597 - -0.1 3,466,600 - +0.4 3,466,600 - +0.0 3,466,631 + -1.6 3,466,631 + -0.7 3,466,661 - -0.4 3,466,661 - -0.1 3,466,661 - +0.3 3,466,667 - -0.0 3,466,713 + -1.0 3,466,713 + +0.1 3,466,713 + -0.4 3,466,713 + -1.3 3,466,719 + -0.3 3,466,753 - +0.3 3,466,772 + +0.1 3,466,809 + -1.6 3,466,884 - -0.9 3,466,988 + -1.4 3,466,988 + -0.6 3,466,993 + -0.9 3,466,994 - -0.2 3,467,003 + -1.1 3,467,013 - -1.1 3,467,033 - +0.4 3,467,056 + +0.7 3,467,078 - -0.8 3,467,078 - +0.9 3,467,102 + -1.0 3,467,103 - -0.2 3,467,103 - -0.8 3,467,109 - -0.6 3,467,109 - -0.0 3,467,123 + +1.8 3,467,184 - -0.2 3,467,230 - -1.9 3,467,275 + -1.0 3,467,403 + CA264_14755 0.26 +0.1 3,467,404 - CA264_14755 0.26 +0.1 3,467,434 + CA264_14755 0.33 -0.7 3,467,434 + CA264_14755 0.33 -1.3 3,467,434 + CA264_14755 0.33 +1.0 3,467,435 - CA264_14755 0.33 -1.2 3,467,449 + CA264_14755 0.36 -1.4 3,467,452 - CA264_14755 0.37 -0.9 3,467,562 + CA264_14755 0.61 -1.8 3,467,612 - CA264_14755 0.72 +0.5 3,467,612 - CA264_14755 0.72 +0.5 3,467,631 + CA264_14755 0.76 -1.1 3,467,631 + CA264_14755 0.76 -3.2 3,467,659 + CA264_14755 0.83 -0.8 3,467,663 + CA264_14755 0.84 -0.4 3,467,667 + CA264_14755 0.84 -1.6 3,467,668 - CA264_14755 0.85 -2.1 3,467,746 + -0.4 3,467,770 - -0.8 3,467,811 + -0.3 3,467,812 - +1.5 3,467,816 + -0.7 3,467,817 - -0.4 3,467,817 - +0.7 3,467,817 - -0.0 3,467,817 - +0.3 3,467,817 - -0.1 3,467,819 - +1.1 3,467,908 + +0.5 3,467,909 - -0.5 3,467,941 - -0.2 3,467,941 - -0.7 3,467,941 - -0.5 3,467,993 - -1.5 3,467,993 - -1.3 3,468,033 + CA264_14760 0.15 -1.3 3,468,033 + CA264_14760 0.15 -0.9 3,468,034 - CA264_14760 0.15 -0.4 3,468,143 - CA264_14760 0.31 +0.1 3,468,143 - CA264_14760 0.31 -0.3 3,468,143 - CA264_14760 0.31 -0.6 3,468,215 + CA264_14760 0.42 -0.6 3,468,292 + CA264_14760 0.54 -0.9 3,468,293 - CA264_14760 0.54 -0.9 3,468,293 - CA264_14760 0.54 -0.3 3,468,326 - CA264_14760 0.59 -0.7 3,468,428 - CA264_14760 0.75 -0.8 3,468,440 + CA264_14760 0.77 -0.7 3,468,444 + CA264_14760 0.77 -1.1 3,468,539 - -0.1 3,468,576 + +0.3 3,468,576 + +0.7 3,468,576 + -0.0 3,468,577 - -0.8 3,468,577 - -1.3 3,468,577 - -0.5 3,468,611 - -0.5 3,468,616 - +0.3
Or see this region's nucleotide sequence