Experiment: m.b. A22 0.04 mg/ml
Only strains with sufficient reads to estimate fitness are shown,
but the strain fitness values are still rather noisy and may be biased towards zero.
Strains near the edge of a gene are not shown as being associated with that
gene (they are in grey).
Strains in the central 10-90% of a gene are color coded by the insertion's strand.
Usually, "+" means that the selectable marker is encoded on the forward strand,
i.e., transcribed rightward.
500 nt CA264_14140 and CA264_14145 are separated by 33 nucleotides CA264_14145 and CA264_14150 are separated by 243 nucleotides CA264_14150 and CA264_14155 are separated by 153 nucleotides
CA264_14140: CA264_14140 - esterase, at 3,321,076 to 3,321,942
_14140
CA264_14145: CA264_14145 - STAS/SEC14 domain-containing protein, at 3,321,976 to 3,322,338
_14145
CA264_14150: CA264_14150 - hypothetical protein, at 3,322,582 to 3,322,989
_14150
CA264_14155: CA264_14155 - hypothetical protein, at 3,323,143 to 3,324,399
_14155
Position (kb)
3322
3323 Strain fitness (log2 ratio)
-2
-1
0
1
2 at 3321.606 kb on - strand, within CA264_14140 at 3321.710 kb on + strand, within CA264_14140 at 3321.732 kb on + strand, within CA264_14140 at 3321.733 kb on - strand, within CA264_14140 at 3321.733 kb on - strand, within CA264_14140 at 3321.736 kb on - strand, within CA264_14140 at 3321.799 kb on + strand, within CA264_14140 at 3321.800 kb on - strand, within CA264_14140 at 3321.853 kb on + strand, within CA264_14140 at 3321.968 kb on + strand at 3321.968 kb on + strand at 3321.968 kb on + strand at 3322.028 kb on + strand, within CA264_14145 at 3322.028 kb on + strand, within CA264_14145 at 3322.028 kb on + strand, within CA264_14145 at 3322.028 kb on + strand, within CA264_14145 at 3322.029 kb on - strand, within CA264_14145 at 3322.029 kb on - strand, within CA264_14145 at 3322.031 kb on + strand, within CA264_14145 at 3322.088 kb on - strand, within CA264_14145 at 3322.204 kb on + strand, within CA264_14145 at 3322.204 kb on + strand, within CA264_14145 at 3322.205 kb on - strand, within CA264_14145 at 3322.205 kb on - strand, within CA264_14145 at 3322.328 kb on - strand at 3322.339 kb on - strand at 3322.342 kb on - strand at 3322.342 kb on - strand at 3322.449 kb on + strand at 3322.449 kb on + strand at 3322.449 kb on + strand at 3322.453 kb on + strand at 3322.454 kb on - strand at 3322.457 kb on + strand at 3322.457 kb on + strand at 3322.474 kb on + strand at 3322.540 kb on + strand at 3322.541 kb on - strand at 3322.541 kb on - strand at 3322.541 kb on - strand at 3322.541 kb on - strand at 3322.543 kb on + strand at 3322.543 kb on + strand at 3322.544 kb on - strand at 3322.569 kb on + strand at 3322.569 kb on + strand at 3322.615 kb on - strand at 3322.617 kb on - strand at 3322.761 kb on + strand, within CA264_14150 at 3322.843 kb on + strand, within CA264_14150 at 3322.843 kb on + strand, within CA264_14150 at 3322.843 kb on + strand, within CA264_14150 at 3322.843 kb on + strand, within CA264_14150 at 3322.844 kb on - strand, within CA264_14150 at 3322.844 kb on - strand, within CA264_14150 at 3322.892 kb on + strand, within CA264_14150 at 3322.893 kb on - strand, within CA264_14150 at 3322.935 kb on - strand, within CA264_14150 at 3322.983 kb on - strand at 3322.988 kb on - strand at 3323.099 kb on + strand at 3323.119 kb on + strand at 3323.141 kb on - strand at 3323.200 kb on + strand at 3323.429 kb on - strand, within CA264_14155 at 3323.499 kb on + strand, within CA264_14155 at 3323.500 kb on - strand, within CA264_14155 at 3323.522 kb on + strand, within CA264_14155 at 3323.560 kb on + strand, within CA264_14155 at 3323.561 kb on - strand, within CA264_14155 at 3323.564 kb on + strand, within CA264_14155 at 3323.570 kb on + strand, within CA264_14155 at 3323.570 kb on + strand, within CA264_14155 at 3323.571 kb on - strand, within CA264_14155 at 3323.571 kb on - strand, within CA264_14155 at 3323.627 kb on + strand, within CA264_14155 at 3323.628 kb on - strand, within CA264_14155 at 3323.673 kb on + strand, within CA264_14155 at 3323.673 kb on + strand, within CA264_14155 at 3323.674 kb on - strand, within CA264_14155 at 3323.675 kb on + strand, within CA264_14155 at 3323.688 kb on + strand, within CA264_14155 at 3323.698 kb on + strand, within CA264_14155 at 3323.718 kb on - strand, within CA264_14155 at 3323.742 kb on + strand, within CA264_14155 at 3323.743 kb on - strand, within CA264_14155 at 3323.867 kb on + strand, within CA264_14155 at 3323.906 kb on + strand, within CA264_14155 at 3323.906 kb on + strand, within CA264_14155 at 3323.907 kb on - strand, within CA264_14155 at 3323.907 kb on - strand, within CA264_14155 at 3323.950 kb on + strand, within CA264_14155 at 3323.950 kb on + strand, within CA264_14155 at 3323.951 kb on - strand, within CA264_14155
Per-strain Table
Position Strand Gene LocusTag Fraction m.b. A22 0.04 mg/ml remove 3,321,606 - CA264_14140 0.61 -0.7 3,321,710 + CA264_14140 0.73 -0.4 3,321,732 + CA264_14140 0.76 -0.7 3,321,733 - CA264_14140 0.76 +0.6 3,321,733 - CA264_14140 0.76 -0.8 3,321,736 - CA264_14140 0.76 -0.4 3,321,799 + CA264_14140 0.83 +0.1 3,321,800 - CA264_14140 0.84 +1.7 3,321,853 + CA264_14140 0.90 +0.5 3,321,968 + -1.2 3,321,968 + -1.7 3,321,968 + -1.7 3,322,028 + CA264_14145 0.14 -0.8 3,322,028 + CA264_14145 0.14 -1.1 3,322,028 + CA264_14145 0.14 -1.8 3,322,028 + CA264_14145 0.14 -1.1 3,322,029 - CA264_14145 0.15 -0.2 3,322,029 - CA264_14145 0.15 +1.2 3,322,031 + CA264_14145 0.15 -0.9 3,322,088 - CA264_14145 0.31 +0.4 3,322,204 + CA264_14145 0.63 -0.7 3,322,204 + CA264_14145 0.63 -0.0 3,322,205 - CA264_14145 0.63 +1.2 3,322,205 - CA264_14145 0.63 +0.7 3,322,328 - +2.7 3,322,339 - +0.3 3,322,342 - -0.5 3,322,342 - -0.4 3,322,449 + -0.3 3,322,449 + +0.4 3,322,449 + -1.0 3,322,453 + -1.2 3,322,454 - -0.8 3,322,457 + +0.2 3,322,457 + -0.6 3,322,474 + +0.5 3,322,540 + +1.0 3,322,541 - -0.2 3,322,541 - +0.3 3,322,541 - +1.2 3,322,541 - +0.5 3,322,543 + -1.2 3,322,543 + +0.7 3,322,544 - +0.1 3,322,569 + +0.4 3,322,569 + -0.6 3,322,615 - -1.7 3,322,617 - -0.2 3,322,761 + CA264_14150 0.44 +0.5 3,322,843 + CA264_14150 0.64 +0.1 3,322,843 + CA264_14150 0.64 +0.3 3,322,843 + CA264_14150 0.64 +0.0 3,322,843 + CA264_14150 0.64 +0.6 3,322,844 - CA264_14150 0.64 +0.4 3,322,844 - CA264_14150 0.64 +0.7 3,322,892 + CA264_14150 0.76 -0.8 3,322,893 - CA264_14150 0.76 -0.3 3,322,935 - CA264_14150 0.87 -1.5 3,322,983 - +0.1 3,322,988 - -0.1 3,323,099 + +1.0 3,323,119 + +0.6 3,323,141 - +0.8 3,323,200 + +0.0 3,323,429 - CA264_14155 0.23 +0.1 3,323,499 + CA264_14155 0.28 +0.3 3,323,500 - CA264_14155 0.28 +0.9 3,323,522 + CA264_14155 0.30 +0.3 3,323,560 + CA264_14155 0.33 -0.6 3,323,561 - CA264_14155 0.33 +0.7 3,323,564 + CA264_14155 0.33 -0.9 3,323,570 + CA264_14155 0.34 -0.5 3,323,570 + CA264_14155 0.34 +0.1 3,323,571 - CA264_14155 0.34 +0.7 3,323,571 - CA264_14155 0.34 +0.5 3,323,627 + CA264_14155 0.39 -0.8 3,323,628 - CA264_14155 0.39 -0.1 3,323,673 + CA264_14155 0.42 +0.0 3,323,673 + CA264_14155 0.42 -0.4 3,323,674 - CA264_14155 0.42 +0.3 3,323,675 + CA264_14155 0.42 -0.1 3,323,688 + CA264_14155 0.43 +1.5 3,323,698 + CA264_14155 0.44 +2.2 3,323,718 - CA264_14155 0.46 -0.4 3,323,742 + CA264_14155 0.48 -0.1 3,323,743 - CA264_14155 0.48 +0.7 3,323,867 + CA264_14155 0.58 +0.6 3,323,906 + CA264_14155 0.61 -0.4 3,323,906 + CA264_14155 0.61 -0.1 3,323,907 - CA264_14155 0.61 -0.6 3,323,907 - CA264_14155 0.61 -0.0 3,323,950 + CA264_14155 0.64 -0.4 3,323,950 + CA264_14155 0.64 -0.1 3,323,951 - CA264_14155 0.64 +0.5
Or see this region's nucleotide sequence