Experiment: m.b. A22 0.04 mg/ml
Only strains with sufficient reads to estimate fitness are shown,
but the strain fitness values are still rather noisy and may be biased towards zero.
Strains near the edge of a gene are not shown as being associated with that
gene (they are in grey).
Strains in the central 10-90% of a gene are color coded by the insertion's strand.
Usually, "+" means that the selectable marker is encoded on the forward strand,
i.e., transcribed rightward.
500 nt CA264_13855 and CA264_13860 overlap by 12 nucleotides CA264_13860 and CA264_13865 are separated by 34 nucleotides CA264_13865 and CA264_13870 are separated by 243 nucleotides CA264_13870 and CA264_13875 are separated by 75 nucleotides
CA264_13855: CA264_13855 - UV damage endonuclease UvsE, at 3,236,897 to 3,237,796
_13855
CA264_13860: CA264_13860 - hypothetical protein, at 3,237,785 to 3,238,282
_13860
CA264_13865: CA264_13865 - hypothetical protein, at 3,238,317 to 3,238,565
_13865
CA264_13870: CA264_13870 - hypothetical protein, at 3,238,809 to 3,239,201
_13870
CA264_13875: CA264_13875 - hypothetical protein, at 3,239,277 to 3,240,101
_13875
Position (kb)
3237
3238
3239 Strain fitness (log2 ratio)
-2
-1
0
1
2 at 3236.938 kb on + strand at 3236.938 kb on + strand at 3237.028 kb on - strand, within CA264_13855 at 3237.035 kb on + strand, within CA264_13855 at 3237.035 kb on + strand, within CA264_13855 at 3237.035 kb on + strand, within CA264_13855 at 3237.036 kb on - strand, within CA264_13855 at 3237.036 kb on - strand, within CA264_13855 at 3237.036 kb on - strand, within CA264_13855 at 3237.133 kb on + strand, within CA264_13855 at 3237.134 kb on - strand, within CA264_13855 at 3237.161 kb on + strand, within CA264_13855 at 3237.162 kb on - strand, within CA264_13855 at 3237.217 kb on - strand, within CA264_13855 at 3237.280 kb on - strand, within CA264_13855 at 3237.381 kb on - strand, within CA264_13855 at 3237.443 kb on + strand, within CA264_13855 at 3237.446 kb on - strand, within CA264_13855 at 3237.655 kb on + strand, within CA264_13855 at 3237.655 kb on + strand, within CA264_13855 at 3237.658 kb on - strand, within CA264_13855 at 3237.658 kb on - strand, within CA264_13855 at 3237.715 kb on + strand at 3237.715 kb on + strand at 3237.887 kb on - strand, within CA264_13860 at 3237.890 kb on + strand, within CA264_13860 at 3237.891 kb on - strand, within CA264_13860 at 3237.891 kb on - strand, within CA264_13860 at 3238.212 kb on - strand, within CA264_13860 at 3238.260 kb on + strand at 3238.292 kb on + strand at 3238.313 kb on + strand at 3238.399 kb on + strand, within CA264_13865 at 3238.402 kb on + strand, within CA264_13865 at 3238.547 kb on + strand at 3238.554 kb on + strand at 3238.579 kb on + strand at 3238.579 kb on + strand at 3238.580 kb on - strand at 3238.751 kb on + strand at 3238.752 kb on - strand at 3238.752 kb on - strand at 3238.777 kb on + strand at 3238.778 kb on - strand at 3238.810 kb on + strand at 3239.007 kb on - strand, within CA264_13870 at 3239.072 kb on + strand, within CA264_13870 at 3239.074 kb on + strand, within CA264_13870 at 3239.075 kb on - strand, within CA264_13870 at 3239.087 kb on - strand, within CA264_13870 at 3239.126 kb on + strand, within CA264_13870 at 3239.127 kb on - strand, within CA264_13870 at 3239.127 kb on - strand, within CA264_13870 at 3239.153 kb on + strand, within CA264_13870 at 3239.236 kb on + strand at 3239.259 kb on + strand
Per-strain Table
Position Strand Gene LocusTag Fraction m.b. A22 0.04 mg/ml remove 3,236,938 + -0.8 3,236,938 + -0.1 3,237,028 - CA264_13855 0.15 +0.4 3,237,035 + CA264_13855 0.15 -2.2 3,237,035 + CA264_13855 0.15 +0.9 3,237,035 + CA264_13855 0.15 -0.6 3,237,036 - CA264_13855 0.15 +0.8 3,237,036 - CA264_13855 0.15 -0.2 3,237,036 - CA264_13855 0.15 -0.5 3,237,133 + CA264_13855 0.26 -1.1 3,237,134 - CA264_13855 0.26 +1.4 3,237,161 + CA264_13855 0.29 -0.3 3,237,162 - CA264_13855 0.29 +1.8 3,237,217 - CA264_13855 0.36 -0.4 3,237,280 - CA264_13855 0.43 +1.0 3,237,381 - CA264_13855 0.54 +0.6 3,237,443 + CA264_13855 0.61 -0.4 3,237,446 - CA264_13855 0.61 +0.2 3,237,655 + CA264_13855 0.84 -1.7 3,237,655 + CA264_13855 0.84 +0.2 3,237,658 - CA264_13855 0.85 -1.4 3,237,658 - CA264_13855 0.85 -0.3 3,237,715 + -0.6 3,237,715 + -1.8 3,237,887 - CA264_13860 0.20 -0.6 3,237,890 + CA264_13860 0.21 -0.8 3,237,891 - CA264_13860 0.21 +2.2 3,237,891 - CA264_13860 0.21 -0.6 3,238,212 - CA264_13860 0.86 -0.2 3,238,260 + -0.1 3,238,292 + -1.2 3,238,313 + +0.1 3,238,399 + CA264_13865 0.33 +1.1 3,238,402 + CA264_13865 0.34 -0.6 3,238,547 + -0.7 3,238,554 + -1.4 3,238,579 + -0.5 3,238,579 + -0.2 3,238,580 - -0.2 3,238,751 + +0.2 3,238,752 - +0.1 3,238,752 - -0.3 3,238,777 + +0.3 3,238,778 - -1.2 3,238,810 + -1.0 3,239,007 - CA264_13870 0.50 +1.9 3,239,072 + CA264_13870 0.67 -1.6 3,239,074 + CA264_13870 0.67 -1.6 3,239,075 - CA264_13870 0.68 +0.5 3,239,087 - CA264_13870 0.71 -0.7 3,239,126 + CA264_13870 0.81 +0.2 3,239,127 - CA264_13870 0.81 -0.6 3,239,127 - CA264_13870 0.81 +0.2 3,239,153 + CA264_13870 0.88 -0.8 3,239,236 + -0.8 3,239,259 + -1.2
Or see this region's nucleotide sequence