Strain Fitness in Pontibacter actiniarum KMM 6156, DSM 19842 around CA264_13380
Experiment: m.b. A22 0.04 mg/ml
Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.
Per-strain Table
Position | Strand | Gene | LocusTag | Fraction | m.b. A22 0.04 mg/ml |
---|---|---|---|---|---|
remove | |||||
3,120,772 | + | -0.2 | |||
3,120,772 | + | -0.4 | |||
3,120,773 | - | +0.9 | |||
3,120,775 | - | -1.1 | |||
3,120,775 | - | +0.6 | |||
3,120,775 | - | +0.2 | |||
3,120,780 | + | -0.8 | |||
3,120,780 | + | +0.1 | |||
3,120,791 | + | -0.9 | |||
3,120,823 | - | +1.2 | |||
3,120,922 | + | -0.2 | |||
3,120,974 | - | CA264_13385 | 0.19 | +1.2 | |
3,120,974 | - | CA264_13385 | 0.19 | +0.5 | |
3,120,985 | - | CA264_13385 | 0.21 | +0.8 | |
3,121,065 | + | CA264_13385 | 0.35 | +0.6 | |
3,121,066 | - | CA264_13385 | 0.36 | +0.7 | |
3,121,260 | - | CA264_13385 | 0.71 | +1.2 | |
3,121,332 | + | CA264_13385 | 0.85 | +1.1 | |
3,121,369 | + | -0.5 | |||
3,121,377 | - | +0.9 | |||
3,121,417 | + | -0.5 | |||
3,121,418 | - | +0.8 | |||
3,121,424 | + | -0.2 | |||
3,121,428 | + | +0.2 | |||
3,121,429 | - | +0.3 | |||
3,121,437 | + | -0.4 | |||
3,121,437 | + | -0.6 | |||
3,121,445 | + | +0.4 | |||
3,121,449 | + | -0.5 | |||
3,121,490 | + | -0.3 | |||
3,121,495 | + | +0.1 | |||
3,121,558 | - | +0.6 | |||
3,121,558 | - | -0.8 | |||
3,121,559 | + | -1.1 | |||
3,121,559 | + | +0.6 |
Or see this region's nucleotide sequence