Experiment: m.b. A22 0.04 mg/ml
Only strains with sufficient reads to estimate fitness are shown,
but the strain fitness values are still rather noisy and may be biased towards zero.
Strains near the edge of a gene are not shown as being associated with that
gene (they are in grey).
Strains in the central 10-90% of a gene are color coded by the insertion's strand.
Usually, "+" means that the selectable marker is encoded on the forward strand,
i.e., transcribed rightward.
500 nt CA264_13180 and CA264_13185 are separated by 14 nucleotides CA264_13185 and CA264_13190 are separated by 140 nucleotides
CA264_13180: CA264_13180 - gamma-glutamyltransferase, at 3,070,962 to 3,072,695
_13180
CA264_13185: CA264_13185 - hypothetical protein, at 3,072,710 to 3,073,102
_13185
CA264_13190: CA264_13190 - hypothetical protein, at 3,073,243 to 3,076,728
_13190
Position (kb)
3072
3073
3074 Strain fitness (log2 ratio)
-2
-1
0
1 at 3071.805 kb on + strand, within CA264_13180 at 3071.806 kb on - strand, within CA264_13180 at 3071.806 kb on - strand, within CA264_13180 at 3071.970 kb on + strand, within CA264_13180 at 3071.998 kb on + strand, within CA264_13180 at 3072.137 kb on + strand, within CA264_13180 at 3072.137 kb on + strand, within CA264_13180 at 3072.137 kb on + strand, within CA264_13180 at 3072.233 kb on - strand, within CA264_13180 at 3072.313 kb on + strand, within CA264_13180 at 3072.378 kb on + strand, within CA264_13180 at 3072.379 kb on - strand, within CA264_13180 at 3072.385 kb on + strand, within CA264_13180 at 3072.386 kb on - strand, within CA264_13180 at 3072.521 kb on - strand, within CA264_13180 at 3072.581 kb on + strand at 3072.613 kb on + strand at 3072.647 kb on - strand at 3072.693 kb on + strand at 3072.694 kb on - strand at 3072.713 kb on + strand at 3072.714 kb on - strand at 3072.714 kb on - strand at 3072.754 kb on - strand, within CA264_13185 at 3072.754 kb on - strand, within CA264_13185 at 3072.754 kb on - strand, within CA264_13185 at 3072.787 kb on + strand, within CA264_13185 at 3072.819 kb on - strand, within CA264_13185 at 3072.914 kb on + strand, within CA264_13185 at 3072.998 kb on - strand, within CA264_13185 at 3073.032 kb on + strand, within CA264_13185 at 3073.076 kb on - strand at 3073.082 kb on + strand at 3073.082 kb on + strand at 3073.116 kb on - strand at 3073.118 kb on - strand at 3073.126 kb on + strand at 3073.161 kb on - strand at 3073.161 kb on - strand at 3073.166 kb on - strand at 3073.301 kb on + strand at 3073.301 kb on + strand at 3073.302 kb on - strand at 3073.302 kb on - strand at 3073.302 kb on - strand at 3073.383 kb on + strand at 3073.384 kb on - strand at 3073.384 kb on - strand at 3073.456 kb on + strand at 3073.456 kb on + strand at 3073.456 kb on + strand at 3073.456 kb on + strand at 3073.456 kb on + strand at 3073.457 kb on - strand at 3073.514 kb on - strand at 3073.514 kb on - strand at 3073.515 kb on + strand at 3073.527 kb on + strand at 3073.543 kb on + strand at 3073.544 kb on - strand at 3073.544 kb on - strand at 3073.573 kb on + strand at 3073.605 kb on - strand, within CA264_13190 at 3073.675 kb on - strand, within CA264_13190 at 3073.733 kb on + strand, within CA264_13190 at 3073.908 kb on + strand, within CA264_13190 at 3073.916 kb on - strand, within CA264_13190 at 3073.929 kb on + strand, within CA264_13190 at 3073.929 kb on + strand, within CA264_13190 at 3073.929 kb on + strand, within CA264_13190 at 3073.980 kb on + strand, within CA264_13190 at 3073.981 kb on - strand, within CA264_13190 at 3073.981 kb on - strand, within CA264_13190 at 3073.981 kb on - strand, within CA264_13190 at 3073.992 kb on + strand, within CA264_13190 at 3073.992 kb on + strand, within CA264_13190 at 3073.993 kb on - strand, within CA264_13190 at 3073.994 kb on + strand, within CA264_13190 at 3073.994 kb on + strand, within CA264_13190 at 3073.994 kb on + strand, within CA264_13190 at 3074.060 kb on + strand, within CA264_13190 at 3074.061 kb on - strand, within CA264_13190 at 3074.064 kb on + strand, within CA264_13190 at 3074.065 kb on - strand, within CA264_13190
Per-strain Table
Position Strand Gene LocusTag Fraction m.b. A22 0.04 mg/ml remove 3,071,805 + CA264_13180 0.49 -0.3 3,071,806 - CA264_13180 0.49 +0.6 3,071,806 - CA264_13180 0.49 -0.2 3,071,970 + CA264_13180 0.58 +0.3 3,071,998 + CA264_13180 0.60 -0.3 3,072,137 + CA264_13180 0.68 +1.2 3,072,137 + CA264_13180 0.68 +1.7 3,072,137 + CA264_13180 0.68 -0.0 3,072,233 - CA264_13180 0.73 -0.3 3,072,313 + CA264_13180 0.78 -0.6 3,072,378 + CA264_13180 0.82 +1.2 3,072,379 - CA264_13180 0.82 +0.1 3,072,385 + CA264_13180 0.82 -0.1 3,072,386 - CA264_13180 0.82 +0.7 3,072,521 - CA264_13180 0.90 +0.6 3,072,581 + -1.6 3,072,613 + +1.0 3,072,647 - +0.3 3,072,693 + -0.1 3,072,694 - +0.1 3,072,713 + +0.1 3,072,714 - +0.5 3,072,714 - +0.2 3,072,754 - CA264_13185 0.11 +0.0 3,072,754 - CA264_13185 0.11 -0.7 3,072,754 - CA264_13185 0.11 +1.0 3,072,787 + CA264_13185 0.20 +0.9 3,072,819 - CA264_13185 0.28 -1.2 3,072,914 + CA264_13185 0.52 +0.3 3,072,998 - CA264_13185 0.73 +1.4 3,073,032 + CA264_13185 0.82 -1.2 3,073,076 - -0.1 3,073,082 + +0.8 3,073,082 + -0.1 3,073,116 - -0.3 3,073,118 - -0.0 3,073,126 + -0.1 3,073,161 - -0.4 3,073,161 - +0.4 3,073,166 - +0.0 3,073,301 + +1.0 3,073,301 + -0.5 3,073,302 - +0.5 3,073,302 - +0.3 3,073,302 - +0.1 3,073,383 + -0.4 3,073,384 - +0.9 3,073,384 - -0.3 3,073,456 + +0.3 3,073,456 + +0.3 3,073,456 + -0.9 3,073,456 + -0.4 3,073,456 + -0.5 3,073,457 - -2.0 3,073,514 - +0.3 3,073,514 - -0.1 3,073,515 + -0.4 3,073,527 + -0.6 3,073,543 + -2.1 3,073,544 - +0.2 3,073,544 - -0.2 3,073,573 + -2.5 3,073,605 - CA264_13190 0.10 +0.2 3,073,675 - CA264_13190 0.12 -0.4 3,073,733 + CA264_13190 0.14 -0.7 3,073,908 + CA264_13190 0.19 +0.1 3,073,916 - CA264_13190 0.19 -0.6 3,073,929 + CA264_13190 0.20 -0.9 3,073,929 + CA264_13190 0.20 -0.3 3,073,929 + CA264_13190 0.20 -0.5 3,073,980 + CA264_13190 0.21 -0.3 3,073,981 - CA264_13190 0.21 -0.5 3,073,981 - CA264_13190 0.21 +0.1 3,073,981 - CA264_13190 0.21 +1.1 3,073,992 + CA264_13190 0.21 -0.3 3,073,992 + CA264_13190 0.21 -0.8 3,073,993 - CA264_13190 0.22 +0.1 3,073,994 + CA264_13190 0.22 -1.2 3,073,994 + CA264_13190 0.22 -0.7 3,073,994 + CA264_13190 0.22 -0.4 3,074,060 + CA264_13190 0.23 -0.4 3,074,061 - CA264_13190 0.23 +0.9 3,074,064 + CA264_13190 0.24 +1.0 3,074,065 - CA264_13190 0.24 -1.3
Or see this region's nucleotide sequence