Experiment: m.b. A22 0.04 mg/ml
Only strains with sufficient reads to estimate fitness are shown,
but the strain fitness values are still rather noisy and may be biased towards zero.
Strains near the edge of a gene are not shown as being associated with that
gene (they are in grey).
Strains in the central 10-90% of a gene are color coded by the insertion's strand.
Usually, "+" means that the selectable marker is encoded on the forward strand,
i.e., transcribed rightward.
500 nt CA264_11720 and CA264_11725 are separated by 143 nucleotides CA264_11725 and CA264_11730 overlap by 26 nucleotides
CA264_11720: CA264_11720 - hypothetical protein, at 2,729,998 to 2,730,930
_11720
CA264_11725: CA264_11725 - hypothetical protein, at 2,731,074 to 2,731,466
_11725
CA264_11730: CA264_11730 - hypothetical protein, at 2,731,441 to 2,732,391
_11730
Position (kb)
2731
2732 Strain fitness (log2 ratio)
-2
-1
0
1
2 at 2730.094 kb on + strand, within CA264_11720 at 2730.094 kb on + strand, within CA264_11720 at 2730.095 kb on - strand, within CA264_11720 at 2730.163 kb on + strand, within CA264_11720 at 2730.310 kb on - strand, within CA264_11720 at 2730.416 kb on - strand, within CA264_11720 at 2730.416 kb on - strand, within CA264_11720 at 2730.416 kb on - strand, within CA264_11720 at 2730.470 kb on + strand, within CA264_11720 at 2730.539 kb on + strand, within CA264_11720 at 2730.713 kb on + strand, within CA264_11720 at 2730.844 kb on + strand at 2730.844 kb on + strand at 2730.944 kb on - strand at 2731.048 kb on - strand at 2731.061 kb on - strand at 2731.061 kb on - strand at 2731.062 kb on + strand at 2731.109 kb on + strand at 2731.421 kb on - strand, within CA264_11725 at 2731.421 kb on - strand, within CA264_11725 at 2731.433 kb on - strand at 2731.433 kb on - strand at 2731.459 kb on + strand at 2731.518 kb on - strand at 2731.540 kb on - strand, within CA264_11730 at 2731.640 kb on + strand, within CA264_11730 at 2731.659 kb on + strand, within CA264_11730 at 2731.659 kb on + strand, within CA264_11730 at 2731.694 kb on - strand, within CA264_11730 at 2731.694 kb on - strand, within CA264_11730 at 2731.695 kb on + strand, within CA264_11730 at 2731.727 kb on - strand, within CA264_11730 at 2731.778 kb on - strand, within CA264_11730 at 2731.793 kb on - strand, within CA264_11730 at 2731.873 kb on + strand, within CA264_11730 at 2731.930 kb on - strand, within CA264_11730 at 2731.935 kb on - strand, within CA264_11730 at 2731.939 kb on + strand, within CA264_11730 at 2731.940 kb on - strand, within CA264_11730 at 2732.037 kb on + strand, within CA264_11730 at 2732.132 kb on - strand, within CA264_11730 at 2732.181 kb on + strand, within CA264_11730 at 2732.187 kb on - strand, within CA264_11730 at 2732.267 kb on + strand, within CA264_11730 at 2732.329 kb on + strand at 2732.330 kb on - strand at 2732.330 kb on - strand at 2732.342 kb on - strand
Per-strain Table
Position Strand Gene LocusTag Fraction m.b. A22 0.04 mg/ml remove 2,730,094 + CA264_11720 0.10 -0.8 2,730,094 + CA264_11720 0.10 -0.5 2,730,095 - CA264_11720 0.10 +0.2 2,730,163 + CA264_11720 0.18 +1.8 2,730,310 - CA264_11720 0.33 +1.1 2,730,416 - CA264_11720 0.45 -0.4 2,730,416 - CA264_11720 0.45 -0.3 2,730,416 - CA264_11720 0.45 +1.3 2,730,470 + CA264_11720 0.51 +1.1 2,730,539 + CA264_11720 0.58 +1.5 2,730,713 + CA264_11720 0.77 +0.9 2,730,844 + +0.5 2,730,844 + -0.1 2,730,944 - -0.1 2,731,048 - +0.5 2,731,061 - +0.5 2,731,061 - +1.0 2,731,062 + +0.4 2,731,109 + +0.5 2,731,421 - CA264_11725 0.88 +0.3 2,731,421 - CA264_11725 0.88 +0.8 2,731,433 - -0.2 2,731,433 - -0.7 2,731,459 + -1.2 2,731,518 - +1.0 2,731,540 - CA264_11730 0.10 -0.3 2,731,640 + CA264_11730 0.21 -1.0 2,731,659 + CA264_11730 0.23 +0.5 2,731,659 + CA264_11730 0.23 +0.2 2,731,694 - CA264_11730 0.27 -0.8 2,731,694 - CA264_11730 0.27 -0.0 2,731,695 + CA264_11730 0.27 -0.3 2,731,727 - CA264_11730 0.30 -0.5 2,731,778 - CA264_11730 0.35 -1.1 2,731,793 - CA264_11730 0.37 +1.5 2,731,873 + CA264_11730 0.45 -0.5 2,731,930 - CA264_11730 0.51 -1.4 2,731,935 - CA264_11730 0.52 -0.9 2,731,939 + CA264_11730 0.52 -0.0 2,731,940 - CA264_11730 0.52 -2.2 2,732,037 + CA264_11730 0.63 -0.1 2,732,132 - CA264_11730 0.73 -0.2 2,732,181 + CA264_11730 0.78 +1.9 2,732,187 - CA264_11730 0.78 -0.8 2,732,267 + CA264_11730 0.87 +2.1 2,732,329 + +0.0 2,732,330 - +0.5 2,732,330 - +1.1 2,732,342 - -0.7
Or see this region's nucleotide sequence