Experiment: m.b. A22 0.04 mg/ml
Only strains with sufficient reads to estimate fitness are shown,
but the strain fitness values are still rather noisy and may be biased towards zero.
Strains near the edge of a gene are not shown as being associated with that
gene (they are in grey).
Strains in the central 10-90% of a gene are color coded by the insertion's strand.
Usually, "+" means that the selectable marker is encoded on the forward strand,
i.e., transcribed rightward.
500 nt CA264_06920 and CA264_06925 are separated by 130 nucleotides CA264_06925 and CA264_06930 are separated by 23 nucleotides
CA264_06920: CA264_06920 - ketol-acid reductoisomerase, at 1,599,362 to 1,600,408
_06920
CA264_06925: CA264_06925 - acetolactate synthase small subunit, at 1,600,539 to 1,601,147
_06925
CA264_06930: CA264_06930 - acetolactate synthase, large subunit, biosynthetic type, at 1,601,171 to 1,602,904
_06930
Position (kb)
1600
1601
1602 Strain fitness (log2 ratio)
-2
-1
0
1
2
3 at 1599.726 kb on + strand, within CA264_06920 at 1599.727 kb on - strand, within CA264_06920 at 1599.727 kb on - strand, within CA264_06920 at 1599.737 kb on + strand, within CA264_06920 at 1599.738 kb on - strand, within CA264_06920 at 1599.893 kb on + strand, within CA264_06920 at 1599.894 kb on - strand, within CA264_06920 at 1599.894 kb on - strand, within CA264_06920 at 1600.019 kb on - strand, within CA264_06920 at 1600.047 kb on + strand, within CA264_06920 at 1600.097 kb on + strand, within CA264_06920 at 1600.119 kb on - strand, within CA264_06920 at 1600.157 kb on + strand, within CA264_06920 at 1600.181 kb on + strand, within CA264_06920 at 1600.198 kb on + strand, within CA264_06920 at 1600.199 kb on - strand, within CA264_06920 at 1600.238 kb on + strand, within CA264_06920 at 1600.238 kb on + strand, within CA264_06920 at 1600.382 kb on + strand at 1600.423 kb on + strand at 1600.430 kb on - strand at 1600.430 kb on - strand at 1600.492 kb on + strand at 1600.493 kb on - strand at 1600.574 kb on - strand at 1600.762 kb on + strand, within CA264_06925 at 1600.762 kb on + strand, within CA264_06925 at 1600.763 kb on - strand, within CA264_06925 at 1600.895 kb on + strand, within CA264_06925 at 1600.900 kb on + strand, within CA264_06925 at 1600.903 kb on - strand, within CA264_06925 at 1600.929 kb on + strand, within CA264_06925 at 1601.099 kb on - strand at 1601.147 kb on + strand at 1601.147 kb on + strand at 1601.148 kb on - strand at 1601.148 kb on - strand at 1601.148 kb on - strand at 1601.148 kb on - strand at 1601.151 kb on + strand at 1601.151 kb on + strand at 1601.151 kb on + strand at 1601.151 kb on + strand at 1601.151 kb on + strand at 1601.152 kb on - strand at 1601.152 kb on - strand at 1601.161 kb on + strand at 1601.172 kb on + strand at 1601.192 kb on + strand at 1601.193 kb on - strand at 1601.193 kb on - strand at 1601.259 kb on + strand at 1601.259 kb on + strand at 1601.301 kb on - strand at 1601.357 kb on + strand, within CA264_06930 at 1601.357 kb on + strand, within CA264_06930 at 1601.358 kb on - strand, within CA264_06930 at 1601.466 kb on - strand, within CA264_06930 at 1601.485 kb on + strand, within CA264_06930 at 1601.486 kb on - strand, within CA264_06930 at 1601.488 kb on + strand, within CA264_06930 at 1601.488 kb on + strand, within CA264_06930 at 1601.489 kb on - strand, within CA264_06930 at 1601.489 kb on - strand, within CA264_06930 at 1601.489 kb on - strand, within CA264_06930 at 1601.489 kb on - strand, within CA264_06930 at 1601.489 kb on - strand, within CA264_06930 at 1601.565 kb on + strand, within CA264_06930 at 1601.570 kb on - strand, within CA264_06930 at 1601.570 kb on - strand, within CA264_06930 at 1601.814 kb on + strand, within CA264_06930 at 1601.831 kb on + strand, within CA264_06930 at 1601.842 kb on + strand, within CA264_06930 at 1601.843 kb on - strand, within CA264_06930 at 1601.949 kb on - strand, within CA264_06930 at 1601.949 kb on - strand, within CA264_06930 at 1601.982 kb on + strand, within CA264_06930 at 1602.034 kb on + strand, within CA264_06930 at 1602.072 kb on + strand, within CA264_06930
Per-strain Table
Position Strand Gene LocusTag Fraction m.b. A22 0.04 mg/ml remove 1,599,726 + CA264_06920 0.35 +0.0 1,599,727 - CA264_06920 0.35 -1.8 1,599,727 - CA264_06920 0.35 +1.3 1,599,737 + CA264_06920 0.36 +0.5 1,599,738 - CA264_06920 0.36 +1.3 1,599,893 + CA264_06920 0.51 -0.6 1,599,894 - CA264_06920 0.51 +0.5 1,599,894 - CA264_06920 0.51 +1.0 1,600,019 - CA264_06920 0.63 +0.5 1,600,047 + CA264_06920 0.65 -1.0 1,600,097 + CA264_06920 0.70 +2.0 1,600,119 - CA264_06920 0.72 +0.7 1,600,157 + CA264_06920 0.76 +0.0 1,600,181 + CA264_06920 0.78 -0.8 1,600,198 + CA264_06920 0.80 +0.0 1,600,199 - CA264_06920 0.80 +0.6 1,600,238 + CA264_06920 0.84 -0.4 1,600,238 + CA264_06920 0.84 -0.4 1,600,382 + -0.9 1,600,423 + -0.5 1,600,430 - +0.1 1,600,430 - -0.2 1,600,492 + -0.9 1,600,493 - +0.9 1,600,574 - -1.7 1,600,762 + CA264_06925 0.37 +1.2 1,600,762 + CA264_06925 0.37 -0.7 1,600,763 - CA264_06925 0.37 +1.9 1,600,895 + CA264_06925 0.58 +1.6 1,600,900 + CA264_06925 0.59 +0.0 1,600,903 - CA264_06925 0.60 +0.5 1,600,929 + CA264_06925 0.64 +1.1 1,601,099 - +0.7 1,601,147 + -0.6 1,601,147 + -1.1 1,601,148 - +0.3 1,601,148 - +0.3 1,601,148 - +1.2 1,601,148 - -0.7 1,601,151 + +1.2 1,601,151 + +0.6 1,601,151 + -0.6 1,601,151 + -0.9 1,601,151 + +0.0 1,601,152 - +0.7 1,601,152 - +0.7 1,601,161 + +0.8 1,601,172 + +0.1 1,601,192 + -0.0 1,601,193 - +0.9 1,601,193 - +1.5 1,601,259 + -1.4 1,601,259 + +0.6 1,601,301 - +0.8 1,601,357 + CA264_06930 0.11 +0.1 1,601,357 + CA264_06930 0.11 -0.3 1,601,358 - CA264_06930 0.11 +0.3 1,601,466 - CA264_06930 0.17 +0.6 1,601,485 + CA264_06930 0.18 +0.3 1,601,486 - CA264_06930 0.18 +1.1 1,601,488 + CA264_06930 0.18 +1.0 1,601,488 + CA264_06930 0.18 +0.4 1,601,489 - CA264_06930 0.18 -0.2 1,601,489 - CA264_06930 0.18 -0.9 1,601,489 - CA264_06930 0.18 +2.8 1,601,489 - CA264_06930 0.18 +1.6 1,601,489 - CA264_06930 0.18 +0.8 1,601,565 + CA264_06930 0.23 +0.2 1,601,570 - CA264_06930 0.23 +0.9 1,601,570 - CA264_06930 0.23 +0.1 1,601,814 + CA264_06930 0.37 +0.7 1,601,831 + CA264_06930 0.38 -0.2 1,601,842 + CA264_06930 0.39 -0.3 1,601,843 - CA264_06930 0.39 +0.4 1,601,949 - CA264_06930 0.45 +0.3 1,601,949 - CA264_06930 0.45 +0.9 1,601,982 + CA264_06930 0.47 +0.2 1,602,034 + CA264_06930 0.50 +0.7 1,602,072 + CA264_06930 0.52 -0.4
Or see this region's nucleotide sequence