Experiment: m.b. A22 0.04 mg/ml
Only strains with sufficient reads to estimate fitness are shown,
but the strain fitness values are still rather noisy and may be biased towards zero.
Strains near the edge of a gene are not shown as being associated with that
gene (they are in grey).
Strains in the central 10-90% of a gene are color coded by the insertion's strand.
Usually, "+" means that the selectable marker is encoded on the forward strand,
i.e., transcribed rightward.
500 nt CA264_05790 and CA264_05795 are separated by 214 nucleotides CA264_05795 and CA264_05800 are separated by 271 nucleotides CA264_05800 and CA264_05805 are separated by 48 nucleotides
CA264_05790: CA264_05790 - heavy metal translocating P-type ATPase, at 1,347,489 to 1,349,894
_05790
CA264_05795: CA264_05795 - hypothetical protein, at 1,350,109 to 1,350,561
_05795
CA264_05800: CA264_05800 - hypothetical protein, at 1,350,833 to 1,351,381
_05800
CA264_05805: CA264_05805 - hypothetical protein, at 1,351,430 to 1,353,190
_05805
Position (kb)
1350
1351 Strain fitness (log2 ratio)
-2
-1
0
1
2 at 1349.149 kb on - strand, within CA264_05790 at 1349.367 kb on - strand, within CA264_05790 at 1349.374 kb on + strand, within CA264_05790 at 1349.375 kb on - strand, within CA264_05790 at 1349.431 kb on + strand, within CA264_05790 at 1349.437 kb on - strand, within CA264_05790 at 1349.455 kb on - strand, within CA264_05790 at 1349.566 kb on - strand, within CA264_05790 at 1349.606 kb on - strand, within CA264_05790 at 1349.636 kb on + strand, within CA264_05790 at 1349.743 kb on + strand at 1349.777 kb on - strand at 1349.908 kb on + strand at 1349.978 kb on - strand at 1349.978 kb on - strand at 1349.992 kb on + strand at 1350.003 kb on + strand at 1350.102 kb on - strand at 1350.116 kb on + strand at 1350.132 kb on - strand at 1350.155 kb on + strand, within CA264_05795 at 1350.404 kb on + strand, within CA264_05795 at 1350.404 kb on + strand, within CA264_05795 at 1350.404 kb on + strand, within CA264_05795 at 1350.404 kb on + strand, within CA264_05795 at 1350.405 kb on - strand, within CA264_05795 at 1350.405 kb on - strand, within CA264_05795 at 1350.448 kb on + strand, within CA264_05795 at 1350.448 kb on + strand, within CA264_05795 at 1350.449 kb on - strand, within CA264_05795 at 1350.464 kb on + strand, within CA264_05795 at 1350.464 kb on + strand, within CA264_05795 at 1350.487 kb on - strand, within CA264_05795 at 1350.537 kb on - strand at 1350.537 kb on - strand at 1350.560 kb on - strand at 1350.560 kb on - strand at 1350.560 kb on - strand at 1350.568 kb on - strand at 1350.570 kb on - strand at 1350.570 kb on - strand at 1350.570 kb on - strand at 1350.579 kb on + strand at 1350.579 kb on + strand at 1350.580 kb on - strand at 1350.590 kb on + strand at 1350.605 kb on + strand at 1350.641 kb on - strand at 1350.644 kb on + strand at 1350.645 kb on - strand at 1350.820 kb on + strand at 1350.820 kb on + strand at 1350.820 kb on + strand at 1350.821 kb on - strand at 1350.824 kb on - strand at 1350.824 kb on - strand at 1350.824 kb on - strand at 1350.825 kb on + strand at 1350.825 kb on + strand at 1350.840 kb on - strand at 1350.996 kb on + strand, within CA264_05800 at 1350.997 kb on - strand, within CA264_05800 at 1350.997 kb on - strand, within CA264_05800 at 1351.043 kb on - strand, within CA264_05800 at 1351.092 kb on - strand, within CA264_05800 at 1351.112 kb on + strand, within CA264_05800 at 1351.137 kb on - strand, within CA264_05800 at 1351.193 kb on + strand, within CA264_05800 at 1351.193 kb on + strand, within CA264_05800 at 1351.194 kb on - strand, within CA264_05800 at 1351.208 kb on + strand, within CA264_05800 at 1351.209 kb on - strand, within CA264_05800 at 1351.287 kb on - strand, within CA264_05800 at 1351.359 kb on - strand at 1351.398 kb on - strand at 1351.470 kb on + strand at 1351.474 kb on + strand at 1351.475 kb on - strand at 1351.519 kb on + strand at 1351.524 kb on + strand at 1351.533 kb on + strand at 1351.533 kb on + strand at 1351.534 kb on - strand at 1351.542 kb on - strand at 1351.559 kb on - strand
Per-strain Table
Position Strand Gene LocusTag Fraction m.b. A22 0.04 mg/ml remove 1,349,149 - CA264_05790 0.69 -0.7 1,349,367 - CA264_05790 0.78 +0.5 1,349,374 + CA264_05790 0.78 +0.3 1,349,375 - CA264_05790 0.78 -0.8 1,349,431 + CA264_05790 0.81 +1.3 1,349,437 - CA264_05790 0.81 -0.3 1,349,455 - CA264_05790 0.82 -1.2 1,349,566 - CA264_05790 0.86 -1.4 1,349,606 - CA264_05790 0.88 +0.3 1,349,636 + CA264_05790 0.89 +0.3 1,349,743 + +0.4 1,349,777 - -0.4 1,349,908 + +1.1 1,349,978 - +0.5 1,349,978 - +0.2 1,349,992 + +1.6 1,350,003 + +1.5 1,350,102 - +0.2 1,350,116 + +0.4 1,350,132 - -0.6 1,350,155 + CA264_05795 0.10 +1.2 1,350,404 + CA264_05795 0.65 +1.9 1,350,404 + CA264_05795 0.65 +0.9 1,350,404 + CA264_05795 0.65 +0.9 1,350,404 + CA264_05795 0.65 +1.7 1,350,405 - CA264_05795 0.65 +0.1 1,350,405 - CA264_05795 0.65 +1.2 1,350,448 + CA264_05795 0.75 -0.4 1,350,448 + CA264_05795 0.75 +2.3 1,350,449 - CA264_05795 0.75 +1.1 1,350,464 + CA264_05795 0.78 +1.4 1,350,464 + CA264_05795 0.78 +0.4 1,350,487 - CA264_05795 0.83 -0.8 1,350,537 - +0.3 1,350,537 - -1.0 1,350,560 - -1.7 1,350,560 - -1.8 1,350,560 - -0.9 1,350,568 - +0.2 1,350,570 - -1.3 1,350,570 - -1.7 1,350,570 - +1.7 1,350,579 + +0.1 1,350,579 + -1.0 1,350,580 - -0.5 1,350,590 + +0.4 1,350,605 + -0.4 1,350,641 - -0.1 1,350,644 + +1.2 1,350,645 - +0.5 1,350,820 + -0.2 1,350,820 + -0.1 1,350,820 + -0.3 1,350,821 - -0.2 1,350,824 - +0.4 1,350,824 - +0.4 1,350,824 - +0.4 1,350,825 + -0.1 1,350,825 + +1.5 1,350,840 - +0.7 1,350,996 + CA264_05800 0.30 -0.3 1,350,997 - CA264_05800 0.30 +0.2 1,350,997 - CA264_05800 0.30 +1.3 1,351,043 - CA264_05800 0.38 +0.3 1,351,092 - CA264_05800 0.47 +0.7 1,351,112 + CA264_05800 0.51 -0.3 1,351,137 - CA264_05800 0.55 +1.3 1,351,193 + CA264_05800 0.66 +1.2 1,351,193 + CA264_05800 0.66 -0.2 1,351,194 - CA264_05800 0.66 +0.0 1,351,208 + CA264_05800 0.68 -0.6 1,351,209 - CA264_05800 0.68 +0.7 1,351,287 - CA264_05800 0.83 +0.3 1,351,359 - +0.2 1,351,398 - -0.2 1,351,470 + -1.0 1,351,474 + +0.2 1,351,475 - +1.5 1,351,519 + -0.7 1,351,524 + +0.6 1,351,533 + +0.2 1,351,533 + +0.1 1,351,534 - +0.8 1,351,542 - +0.2 1,351,559 - +1.7
Or see this region's nucleotide sequence