Experiment: m.b. A22 0.04 mg/ml
Only strains with sufficient reads to estimate fitness are shown,
but the strain fitness values are still rather noisy and may be biased towards zero.
Strains near the edge of a gene are not shown as being associated with that
gene (they are in grey).
Strains in the central 10-90% of a gene are color coded by the insertion's strand.
Usually, "+" means that the selectable marker is encoded on the forward strand,
i.e., transcribed rightward.
500 nt CA264_05560 and CA264_05565 are separated by 562 nucleotides CA264_05565 and CA264_05570 are separated by 54 nucleotides CA264_05570 and CA264_05575 are separated by 132 nucleotides
CA264_05560: CA264_05560 - hypothetical protein, at 1,294,564 to 1,295,730
_05560
CA264_05565: CA264_05565 - tRNA-Thr, at 1,296,293 to 1,296,365
_05565
CA264_05570: CA264_05570 - tRNA-Thr, at 1,296,420 to 1,296,495
_05570
CA264_05575: CA264_05575 - hypothetical protein, at 1,296,628 to 1,298,721
_05575
Position (kb)
1296
1297 Strain fitness (log2 ratio)
-2
-1
0
1
2 at 1295.731 kb on - strand at 1295.735 kb on + strand at 1295.756 kb on - strand at 1295.767 kb on - strand at 1295.786 kb on + strand at 1295.798 kb on + strand at 1295.821 kb on + strand at 1295.821 kb on + strand at 1295.823 kb on + strand at 1295.823 kb on + strand at 1295.824 kb on - strand at 1295.827 kb on - strand at 1295.827 kb on - strand at 1295.839 kb on + strand at 1295.840 kb on - strand at 1295.845 kb on + strand at 1295.846 kb on - strand at 1295.857 kb on + strand at 1295.857 kb on + strand at 1295.858 kb on - strand at 1295.858 kb on - strand at 1295.922 kb on - strand at 1295.922 kb on - strand at 1295.924 kb on - strand at 1295.924 kb on - strand at 1296.088 kb on - strand at 1296.120 kb on + strand at 1296.121 kb on - strand at 1296.121 kb on - strand at 1296.127 kb on + strand at 1296.127 kb on + strand at 1296.128 kb on - strand at 1296.133 kb on - strand at 1296.149 kb on + strand at 1296.149 kb on + strand at 1296.167 kb on - strand at 1296.168 kb on + strand at 1296.168 kb on + strand at 1296.169 kb on - strand at 1296.200 kb on - strand at 1296.200 kb on - strand at 1296.289 kb on + strand at 1296.329 kb on + strand, within CA264_05565 at 1296.400 kb on - strand at 1296.400 kb on - strand at 1296.595 kb on - strand at 1296.595 kb on - strand at 1296.828 kb on + strand at 1296.853 kb on - strand, within CA264_05575 at 1296.946 kb on - strand, within CA264_05575 at 1296.946 kb on - strand, within CA264_05575 at 1296.952 kb on - strand, within CA264_05575 at 1296.978 kb on + strand, within CA264_05575 at 1296.978 kb on + strand, within CA264_05575 at 1297.253 kb on - strand, within CA264_05575
Per-strain Table
Position Strand Gene LocusTag Fraction m.b. A22 0.04 mg/ml remove 1,295,731 - -0.2 1,295,735 + -0.4 1,295,756 - +2.0 1,295,767 - -0.4 1,295,786 + -0.4 1,295,798 + -0.1 1,295,821 + +0.6 1,295,821 + -0.5 1,295,823 + -0.1 1,295,823 + +0.2 1,295,824 - +0.1 1,295,827 - +0.4 1,295,827 - +0.5 1,295,839 + -1.9 1,295,840 - -0.0 1,295,845 + +1.5 1,295,846 - +0.1 1,295,857 + +1.0 1,295,857 + -0.3 1,295,858 - +0.0 1,295,858 - -0.2 1,295,922 - -0.3 1,295,922 - +0.1 1,295,924 - +0.4 1,295,924 - -0.2 1,296,088 - +1.0 1,296,120 + -0.1 1,296,121 - +1.1 1,296,121 - -0.1 1,296,127 + +0.1 1,296,127 + +0.4 1,296,128 - +0.4 1,296,133 - -0.2 1,296,149 + -1.2 1,296,149 + -0.0 1,296,167 - -0.3 1,296,168 + -0.7 1,296,168 + -0.3 1,296,169 - -0.1 1,296,200 - -0.1 1,296,200 - -0.1 1,296,289 + +0.4 1,296,329 + CA264_05565 0.49 -0.1 1,296,400 - -0.1 1,296,400 - -0.7 1,296,595 - +0.0 1,296,595 - +0.9 1,296,828 + +0.6 1,296,853 - CA264_05575 0.11 +0.6 1,296,946 - CA264_05575 0.15 +0.8 1,296,946 - CA264_05575 0.15 +1.3 1,296,952 - CA264_05575 0.15 +0.7 1,296,978 + CA264_05575 0.17 +1.7 1,296,978 + CA264_05575 0.17 -0.3 1,297,253 - CA264_05575 0.30 +1.4
Or see this region's nucleotide sequence