Experiment: m.b. A22 0.04 mg/ml
Only strains with sufficient reads to estimate fitness are shown,
but the strain fitness values are still rather noisy and may be biased towards zero.
Strains near the edge of a gene are not shown as being associated with that
gene (they are in grey).
Strains in the central 10-90% of a gene are color coded by the insertion's strand.
Usually, "+" means that the selectable marker is encoded on the forward strand,
i.e., transcribed rightward.
500 nt CA264_04300 and CA264_04305 are separated by 513 nucleotides CA264_04305 and CA264_04310 are separated by 731 nucleotides
CA264_04300: CA264_04300 - ABC transporter substrate-binding protein, at 992,139 to 993,863
_04300
CA264_04305: CA264_04305 - hypothetical protein, at 994,377 to 995,858
_04305
CA264_04310: CA264_04310 - hypothetical protein, at 996,590 to 997,402
_04310
Position (kb) 994
995
996 Strain fitness (log2 ratio) -5
-4
-3
-2
-1
0
1
2
3 at 993.491 kb on + strand, within CA264_04300 at 993.496 kb on - strand, within CA264_04300 at 993.524 kb on + strand, within CA264_04300 at 993.525 kb on - strand, within CA264_04300 at 993.590 kb on - strand, within CA264_04300 at 993.593 kb on + strand, within CA264_04300 at 993.594 kb on - strand, within CA264_04300 at 993.705 kb on - strand at 993.740 kb on + strand at 993.741 kb on - strand at 993.780 kb on + strand at 993.829 kb on - strand at 993.846 kb on + strand at 993.865 kb on + strand at 993.865 kb on + strand at 993.866 kb on - strand at 993.866 kb on - strand at 993.869 kb on + strand at 993.870 kb on - strand at 993.934 kb on + strand at 993.991 kb on + strand at 993.992 kb on - strand at 994.029 kb on - strand at 994.076 kb on - strand at 994.081 kb on - strand at 994.081 kb on - strand at 994.116 kb on + strand at 994.132 kb on + strand at 994.266 kb on + strand at 994.277 kb on - strand at 994.345 kb on - strand at 994.373 kb on + strand at 994.405 kb on + strand at 994.405 kb on + strand at 994.409 kb on + strand at 994.409 kb on + strand at 994.409 kb on + strand at 994.417 kb on + strand at 994.417 kb on + strand at 994.417 kb on + strand at 994.418 kb on - strand at 994.500 kb on + strand at 994.512 kb on + strand at 994.513 kb on - strand at 994.513 kb on - strand at 994.516 kb on + strand at 994.516 kb on + strand at 994.533 kb on + strand, within CA264_04305 at 994.539 kb on - strand, within CA264_04305 at 994.571 kb on - strand, within CA264_04305 at 994.601 kb on + strand, within CA264_04305 at 994.606 kb on + strand, within CA264_04305 at 994.630 kb on - strand, within CA264_04305 at 994.705 kb on + strand, within CA264_04305 at 994.729 kb on - strand, within CA264_04305 at 994.733 kb on - strand, within CA264_04305 at 994.753 kb on + strand, within CA264_04305 at 994.757 kb on + strand, within CA264_04305 at 994.776 kb on - strand, within CA264_04305 at 994.801 kb on + strand, within CA264_04305 at 994.807 kb on + strand, within CA264_04305 at 994.808 kb on - strand, within CA264_04305 at 994.830 kb on - strand, within CA264_04305 at 994.833 kb on + strand, within CA264_04305 at 994.836 kb on - strand, within CA264_04305 at 994.865 kb on - strand, within CA264_04305 at 994.969 kb on + strand, within CA264_04305 at 995.002 kb on - strand, within CA264_04305 at 995.039 kb on + strand, within CA264_04305 at 995.039 kb on + strand, within CA264_04305 at 995.040 kb on - strand, within CA264_04305 at 995.046 kb on + strand, within CA264_04305 at 995.049 kb on + strand, within CA264_04305 at 995.049 kb on + strand, within CA264_04305 at 995.049 kb on + strand, within CA264_04305 at 995.050 kb on - strand, within CA264_04305 at 995.052 kb on - strand, within CA264_04305 at 995.052 kb on - strand, within CA264_04305 at 995.052 kb on - strand, within CA264_04305 at 995.068 kb on - strand, within CA264_04305 at 995.068 kb on - strand, within CA264_04305 at 995.107 kb on + strand, within CA264_04305 at 995.107 kb on + strand, within CA264_04305 at 995.107 kb on + strand, within CA264_04305 at 995.114 kb on - strand, within CA264_04305 at 995.147 kb on - strand, within CA264_04305 at 995.150 kb on + strand, within CA264_04305 at 995.157 kb on - strand, within CA264_04305 at 995.175 kb on - strand, within CA264_04305 at 995.177 kb on + strand, within CA264_04305 at 995.178 kb on - strand, within CA264_04305 at 995.190 kb on - strand, within CA264_04305 at 995.222 kb on + strand, within CA264_04305 at 995.236 kb on - strand, within CA264_04305 at 995.236 kb on - strand, within CA264_04305 at 995.252 kb on - strand, within CA264_04305 at 995.289 kb on + strand, within CA264_04305 at 995.290 kb on - strand, within CA264_04305 at 995.311 kb on + strand, within CA264_04305 at 995.312 kb on - strand, within CA264_04305 at 995.312 kb on - strand, within CA264_04305 at 995.317 kb on + strand, within CA264_04305 at 995.318 kb on - strand, within CA264_04305 at 995.370 kb on - strand, within CA264_04305 at 995.376 kb on - strand, within CA264_04305 at 995.376 kb on - strand, within CA264_04305 at 995.390 kb on - strand, within CA264_04305 at 995.419 kb on + strand, within CA264_04305 at 995.420 kb on - strand, within CA264_04305 at 995.420 kb on - strand, within CA264_04305 at 995.421 kb on + strand, within CA264_04305 at 995.421 kb on + strand, within CA264_04305 at 995.422 kb on + strand, within CA264_04305 at 995.431 kb on - strand, within CA264_04305 at 995.489 kb on - strand, within CA264_04305 at 995.491 kb on + strand, within CA264_04305 at 995.493 kb on + strand, within CA264_04305 at 995.493 kb on + strand, within CA264_04305 at 995.494 kb on - strand, within CA264_04305 at 995.505 kb on + strand, within CA264_04305 at 995.507 kb on + strand, within CA264_04305 at 995.510 kb on + strand, within CA264_04305 at 995.510 kb on + strand, within CA264_04305 at 995.511 kb on - strand, within CA264_04305 at 995.517 kb on - strand, within CA264_04305 at 995.534 kb on - strand, within CA264_04305 at 995.534 kb on - strand, within CA264_04305 at 995.621 kb on + strand, within CA264_04305 at 995.621 kb on + strand, within CA264_04305 at 995.621 kb on + strand, within CA264_04305 at 995.622 kb on - strand, within CA264_04305 at 995.628 kb on - strand, within CA264_04305 at 995.660 kb on + strand, within CA264_04305 at 995.687 kb on + strand, within CA264_04305 at 995.693 kb on - strand, within CA264_04305 at 995.791 kb on + strand at 995.806 kb on - strand at 995.826 kb on - strand at 995.850 kb on + strand at 995.856 kb on + strand at 995.869 kb on + strand at 995.872 kb on + strand at 995.872 kb on + strand at 995.872 kb on + strand at 995.873 kb on - strand at 995.894 kb on + strand at 995.895 kb on - strand at 995.897 kb on + strand at 995.904 kb on + strand at 995.904 kb on + strand at 995.905 kb on - strand at 995.906 kb on + strand at 995.907 kb on - strand at 995.913 kb on + strand at 995.913 kb on + strand at 995.914 kb on - strand at 995.914 kb on - strand at 995.923 kb on - strand at 995.928 kb on + strand at 995.958 kb on - strand at 995.958 kb on - strand at 995.958 kb on - strand at 996.032 kb on + strand at 996.032 kb on + strand at 996.032 kb on + strand at 996.034 kb on + strand at 996.034 kb on + strand at 996.038 kb on - strand at 996.097 kb on + strand at 996.100 kb on + strand at 996.100 kb on + strand at 996.101 kb on - strand at 996.101 kb on - strand at 996.101 kb on - strand at 996.101 kb on - strand at 996.112 kb on + strand at 996.127 kb on - strand at 996.153 kb on - strand at 996.153 kb on - strand at 996.172 kb on - strand at 996.218 kb on - strand at 996.262 kb on - strand at 996.269 kb on + strand at 996.296 kb on + strand at 996.296 kb on + strand at 996.297 kb on - strand at 996.300 kb on + strand at 996.303 kb on + strand at 996.303 kb on + strand at 996.310 kb on - strand at 996.382 kb on - strand at 996.398 kb on + strand at 996.431 kb on + strand at 996.434 kb on + strand at 996.434 kb on + strand at 996.435 kb on - strand at 996.469 kb on - strand at 996.521 kb on - strand at 996.525 kb on + strand at 996.525 kb on + strand at 996.526 kb on - strand at 996.526 kb on - strand at 996.534 kb on + strand at 996.539 kb on - strand at 996.555 kb on + strand at 996.588 kb on + strand at 996.588 kb on + strand at 996.593 kb on + strand at 996.594 kb on - strand at 996.599 kb on + strand at 996.599 kb on + strand at 996.599 kb on + strand at 996.600 kb on - strand at 996.600 kb on - strand at 996.600 kb on - strand at 996.603 kb on + strand at 996.604 kb on - strand at 996.622 kb on - strand at 996.622 kb on - strand at 996.623 kb on + strand at 996.623 kb on + strand at 996.624 kb on - strand at 996.624 kb on - strand at 996.644 kb on + strand at 996.644 kb on + strand at 996.645 kb on - strand at 996.645 kb on - strand at 996.645 kb on - strand at 996.645 kb on - strand at 996.655 kb on - strand at 996.666 kb on + strand at 996.666 kb on + strand at 996.728 kb on + strand, within CA264_04310 at 996.728 kb on + strand, within CA264_04310 at 996.728 kb on + strand, within CA264_04310 at 996.729 kb on - strand, within CA264_04310 at 996.730 kb on + strand, within CA264_04310 at 996.737 kb on + strand, within CA264_04310 at 996.737 kb on + strand, within CA264_04310 at 996.737 kb on + strand, within CA264_04310 at 996.738 kb on - strand, within CA264_04310 at 996.738 kb on - strand, within CA264_04310 at 996.830 kb on + strand, within CA264_04310 at 996.830 kb on + strand, within CA264_04310 at 996.831 kb on - strand, within CA264_04310 at 996.857 kb on + strand, within CA264_04310 at 996.857 kb on + strand, within CA264_04310
Per-strain Table
Position Strand Gene LocusTag Fraction m.b. A22 0.04 mg/ml remove 993,491 + CA264_04300 0.78 -2.7 993,496 - CA264_04300 0.79 -2.1 993,524 + CA264_04300 0.80 -2.1 993,525 - CA264_04300 0.80 -2.6 993,590 - CA264_04300 0.84 -2.0 993,593 + CA264_04300 0.84 -2.5 993,594 - CA264_04300 0.84 -0.3 993,705 - -2.1 993,740 + -4.6 993,741 - -1.6 993,780 + -2.9 993,829 - -2.7 993,846 + -2.3 993,865 + -1.7 993,865 + -1.1 993,866 - -1.3 993,866 - +0.4 993,869 + -0.3 993,870 - -0.4 993,934 + -1.5 993,991 + -1.9 993,992 - -0.4 994,029 - +1.1 994,076 - -0.8 994,081 - -0.2 994,081 - +0.5 994,116 + -1.9 994,132 + -2.3 994,266 + +0.3 994,277 - -0.2 994,345 - -0.1 994,373 + -1.4 994,405 + -2.9 994,405 + -2.2 994,409 + -3.8 994,409 + -1.3 994,409 + -3.8 994,417 + -2.7 994,417 + -1.6 994,417 + -3.1 994,418 - -3.5 994,500 + -5.6 994,512 + -2.1 994,513 - -3.3 994,513 - -3.1 994,516 + -2.9 994,516 + -3.1 994,533 + CA264_04305 0.11 -3.2 994,539 - CA264_04305 0.11 -2.8 994,571 - CA264_04305 0.13 -4.2 994,601 + CA264_04305 0.15 -2.5 994,606 + CA264_04305 0.15 -1.7 994,630 - CA264_04305 0.17 -2.3 994,705 + CA264_04305 0.22 -3.0 994,729 - CA264_04305 0.24 -2.9 994,733 - CA264_04305 0.24 -1.6 994,753 + CA264_04305 0.25 -4.4 994,757 + CA264_04305 0.26 -1.6 994,776 - CA264_04305 0.27 -1.1 994,801 + CA264_04305 0.29 -1.6 994,807 + CA264_04305 0.29 -2.4 994,808 - CA264_04305 0.29 -3.8 994,830 - CA264_04305 0.31 -4.4 994,833 + CA264_04305 0.31 -5.4 994,836 - CA264_04305 0.31 -1.4 994,865 - CA264_04305 0.33 -2.4 994,969 + CA264_04305 0.40 -1.5 995,002 - CA264_04305 0.42 -0.5 995,039 + CA264_04305 0.45 -2.9 995,039 + CA264_04305 0.45 -3.9 995,040 - CA264_04305 0.45 -4.7 995,046 + CA264_04305 0.45 -1.0 995,049 + CA264_04305 0.45 -3.8 995,049 + CA264_04305 0.45 -2.9 995,049 + CA264_04305 0.45 +0.2 995,050 - CA264_04305 0.45 -3.2 995,052 - CA264_04305 0.46 -0.1 995,052 - CA264_04305 0.46 -3.6 995,052 - CA264_04305 0.46 -1.5 995,068 - CA264_04305 0.47 -3.1 995,068 - CA264_04305 0.47 -2.8 995,107 + CA264_04305 0.49 -3.0 995,107 + CA264_04305 0.49 -3.2 995,107 + CA264_04305 0.49 -2.4 995,114 - CA264_04305 0.50 -2.1 995,147 - CA264_04305 0.52 -3.2 995,150 + CA264_04305 0.52 -0.7 995,157 - CA264_04305 0.53 -1.0 995,175 - CA264_04305 0.54 -4.0 995,177 + CA264_04305 0.54 -3.6 995,178 - CA264_04305 0.54 -2.7 995,190 - CA264_04305 0.55 -1.4 995,222 + CA264_04305 0.57 -1.1 995,236 - CA264_04305 0.58 -4.2 995,236 - CA264_04305 0.58 +0.5 995,252 - CA264_04305 0.59 -4.3 995,289 + CA264_04305 0.62 -2.7 995,290 - CA264_04305 0.62 -3.8 995,311 + CA264_04305 0.63 -3.1 995,312 - CA264_04305 0.63 -3.9 995,312 - CA264_04305 0.63 -0.8 995,317 + CA264_04305 0.63 -2.8 995,318 - CA264_04305 0.63 -0.8 995,370 - CA264_04305 0.67 -4.3 995,376 - CA264_04305 0.67 -3.9 995,376 - CA264_04305 0.67 -1.8 995,390 - CA264_04305 0.68 -2.9 995,419 + CA264_04305 0.70 -3.6 995,420 - CA264_04305 0.70 -2.6 995,420 - CA264_04305 0.70 -3.0 995,421 + CA264_04305 0.70 -4.2 995,421 + CA264_04305 0.70 -0.7 995,422 + CA264_04305 0.71 -3.6 995,431 - CA264_04305 0.71 -2.0 995,489 - CA264_04305 0.75 -2.3 995,491 + CA264_04305 0.75 -1.7 995,493 + CA264_04305 0.75 -1.8 995,493 + CA264_04305 0.75 -4.5 995,494 - CA264_04305 0.75 -2.4 995,505 + CA264_04305 0.76 -3.5 995,507 + CA264_04305 0.76 -4.8 995,510 + CA264_04305 0.76 -0.7 995,510 + CA264_04305 0.76 -3.2 995,511 - CA264_04305 0.77 -4.2 995,517 - CA264_04305 0.77 -3.2 995,534 - CA264_04305 0.78 -4.0 995,534 - CA264_04305 0.78 -2.3 995,621 + CA264_04305 0.84 -3.3 995,621 + CA264_04305 0.84 -3.0 995,621 + CA264_04305 0.84 -4.1 995,622 - CA264_04305 0.84 -1.1 995,628 - CA264_04305 0.84 -0.5 995,660 + CA264_04305 0.87 -0.8 995,687 + CA264_04305 0.88 -3.6 995,693 - CA264_04305 0.89 -5.4 995,791 + -3.8 995,806 - -3.4 995,826 - -4.2 995,850 + -0.6 995,856 + -1.0 995,869 + -0.3 995,872 + -0.9 995,872 + -0.5 995,872 + -1.8 995,873 - +1.1 995,894 + -0.3 995,895 - -1.4 995,897 + -0.7 995,904 + +0.5 995,904 + +1.0 995,905 - -2.1 995,906 + +0.7 995,907 - -2.4 995,913 + -0.1 995,913 + -0.3 995,914 - +1.3 995,914 - -1.1 995,923 - -0.4 995,928 + -0.3 995,958 - -2.1 995,958 - -1.4 995,958 - -2.2 996,032 + -0.2 996,032 + +1.1 996,032 + -0.4 996,034 + +0.1 996,034 + +0.4 996,038 - -2.4 996,097 + +0.4 996,100 + -0.7 996,100 + -0.4 996,101 - -1.3 996,101 - -1.8 996,101 - +0.2 996,101 - +0.2 996,112 + -0.2 996,127 - -0.7 996,153 - -0.2 996,153 - -1.7 996,172 - -1.5 996,218 - -1.6 996,262 - -0.7 996,269 + +1.7 996,296 + -1.7 996,296 + -1.4 996,297 - -1.7 996,300 + +0.2 996,303 + -0.4 996,303 + -0.1 996,310 - -0.3 996,382 - -1.8 996,398 + +0.0 996,431 + -0.5 996,434 + +0.4 996,434 + +0.1 996,435 - -1.3 996,469 - -0.8 996,521 - -0.3 996,525 + +0.8 996,525 + -0.3 996,526 - -0.4 996,526 - -1.5 996,534 + -0.1 996,539 - -1.5 996,555 + +0.4 996,588 + -0.2 996,588 + -0.6 996,593 + -0.7 996,594 - +0.2 996,599 + -2.4 996,599 + -0.4 996,599 + +0.2 996,600 - -1.1 996,600 - -1.2 996,600 - -2.0 996,603 + -0.3 996,604 - -0.7 996,622 - -1.6 996,622 - -0.7 996,623 + +0.2 996,623 + -0.2 996,624 - -2.0 996,624 - -1.0 996,644 + +0.2 996,644 + +0.3 996,645 - +0.9 996,645 - +0.3 996,645 - +0.7 996,645 - +1.0 996,655 - +0.5 996,666 + +1.3 996,666 + +1.1 996,728 + CA264_04310 0.17 -0.1 996,728 + CA264_04310 0.17 +0.5 996,728 + CA264_04310 0.17 +0.5 996,729 - CA264_04310 0.17 -0.8 996,730 + CA264_04310 0.17 -0.4 996,737 + CA264_04310 0.18 +0.6 996,737 + CA264_04310 0.18 +0.2 996,737 + CA264_04310 0.18 +0.5 996,738 - CA264_04310 0.18 -0.7 996,738 - CA264_04310 0.18 -0.4 996,830 + CA264_04310 0.30 -0.1 996,830 + CA264_04310 0.30 +0.9 996,831 - CA264_04310 0.30 -2.1 996,857 + CA264_04310 0.33 +3.0 996,857 + CA264_04310 0.33 +0.9
Or see this region's nucleotide sequence