Experiment: m.b. A22 0.04 mg/ml
Only strains with sufficient reads to estimate fitness are shown,
but the strain fitness values are still rather noisy and may be biased towards zero.
Strains near the edge of a gene are not shown as being associated with that
gene (they are in grey).
Strains in the central 10-90% of a gene are color coded by the insertion's strand.
Usually, "+" means that the selectable marker is encoded on the forward strand,
i.e., transcribed rightward.
500 nt CA264_03890 and CA264_03895 overlap by 4 nucleotides CA264_03895 and CA264_03900 are separated by 727 nucleotides
CA264_03890: CA264_03890 - family 2 glycosyl transferase, at 905,748 to 906,881
_03890
CA264_03895: CA264_03895 - hypothetical protein, at 906,878 to 907,135
_03895
CA264_03900: CA264_03900 - serine/threonine protein phosphatase, at 907,863 to 909,086
_03900
Position (kb) 906
907
908 Strain fitness (log2 ratio) -2
-1
0
1 at 905.879 kb on - strand, within CA264_03890 at 905.975 kb on - strand, within CA264_03890 at 906.066 kb on + strand, within CA264_03890 at 906.131 kb on - strand, within CA264_03890 at 906.131 kb on - strand, within CA264_03890 at 906.189 kb on + strand, within CA264_03890 at 906.189 kb on + strand, within CA264_03890 at 906.190 kb on - strand, within CA264_03890 at 906.246 kb on - strand, within CA264_03890 at 906.314 kb on + strand, within CA264_03890 at 906.374 kb on - strand, within CA264_03890 at 906.497 kb on + strand, within CA264_03890 at 906.647 kb on - strand, within CA264_03890 at 906.696 kb on + strand, within CA264_03890 at 906.697 kb on - strand, within CA264_03890 at 906.697 kb on - strand, within CA264_03890 at 906.765 kb on + strand, within CA264_03890 at 906.774 kb on + strand at 906.797 kb on - strand at 906.798 kb on + strand at 906.799 kb on - strand at 906.819 kb on - strand at 906.819 kb on - strand at 906.825 kb on - strand at 906.869 kb on + strand at 906.913 kb on - strand, within CA264_03895 at 906.914 kb on + strand, within CA264_03895 at 906.914 kb on + strand, within CA264_03895 at 906.915 kb on - strand, within CA264_03895 at 906.994 kb on + strand, within CA264_03895 at 906.995 kb on - strand, within CA264_03895 at 906.995 kb on - strand, within CA264_03895 at 906.997 kb on - strand, within CA264_03895 at 907.008 kb on - strand, within CA264_03895 at 907.088 kb on + strand, within CA264_03895 at 907.088 kb on + strand, within CA264_03895 at 907.088 kb on + strand, within CA264_03895 at 907.089 kb on - strand, within CA264_03895 at 907.134 kb on - strand at 907.143 kb on + strand at 907.143 kb on + strand at 907.154 kb on + strand at 907.225 kb on + strand at 907.274 kb on + strand at 907.380 kb on + strand at 907.390 kb on + strand at 907.391 kb on - strand at 907.391 kb on - strand at 907.391 kb on - strand at 907.392 kb on + strand at 907.392 kb on + strand at 907.399 kb on - strand at 907.405 kb on - strand at 907.408 kb on + strand at 907.457 kb on + strand at 907.457 kb on + strand at 907.457 kb on + strand at 907.457 kb on + strand at 907.458 kb on - strand at 907.776 kb on - strand at 907.787 kb on + strand at 907.788 kb on - strand at 907.788 kb on - strand at 907.828 kb on - strand at 907.852 kb on + strand at 907.852 kb on + strand at 907.872 kb on - strand at 907.873 kb on + strand at 907.873 kb on + strand at 907.873 kb on + strand at 907.874 kb on - strand at 907.874 kb on - strand at 907.876 kb on + strand at 907.876 kb on + strand at 907.876 kb on + strand at 907.876 kb on + strand at 907.877 kb on - strand at 907.921 kb on + strand at 907.921 kb on + strand at 907.940 kb on + strand at 907.952 kb on + strand at 907.952 kb on + strand at 908.069 kb on - strand, within CA264_03900
Per-strain Table
Position Strand Gene LocusTag Fraction m.b. A22 0.04 mg/ml remove 905,879 - CA264_03890 0.12 -1.2 905,975 - CA264_03890 0.20 -0.1 906,066 + CA264_03890 0.28 -0.1 906,131 - CA264_03890 0.34 -0.7 906,131 - CA264_03890 0.34 +0.8 906,189 + CA264_03890 0.39 +0.0 906,189 + CA264_03890 0.39 -1.0 906,190 - CA264_03890 0.39 -0.8 906,246 - CA264_03890 0.44 -0.6 906,314 + CA264_03890 0.50 -0.3 906,374 - CA264_03890 0.55 +0.4 906,497 + CA264_03890 0.66 -0.7 906,647 - CA264_03890 0.79 -0.8 906,696 + CA264_03890 0.84 -1.7 906,697 - CA264_03890 0.84 +1.3 906,697 - CA264_03890 0.84 -1.0 906,765 + CA264_03890 0.90 +0.6 906,774 + -0.8 906,797 - +0.1 906,798 + +0.0 906,799 - -1.0 906,819 - -1.0 906,819 - -0.1 906,825 - +1.2 906,869 + -1.1 906,913 - CA264_03895 0.14 +0.1 906,914 + CA264_03895 0.14 -1.3 906,914 + CA264_03895 0.14 +0.3 906,915 - CA264_03895 0.14 -1.5 906,994 + CA264_03895 0.45 +1.3 906,995 - CA264_03895 0.45 -0.5 906,995 - CA264_03895 0.45 -0.3 906,997 - CA264_03895 0.46 -2.2 907,008 - CA264_03895 0.50 -0.5 907,088 + CA264_03895 0.81 +0.4 907,088 + CA264_03895 0.81 -0.4 907,088 + CA264_03895 0.81 -2.5 907,089 - CA264_03895 0.82 -0.7 907,134 - -0.6 907,143 + -0.1 907,143 + -0.3 907,154 + +0.6 907,225 + +0.2 907,274 + -0.2 907,380 + +0.0 907,390 + +0.0 907,391 - -0.9 907,391 - +0.2 907,391 - +1.1 907,392 + -0.8 907,392 + +0.9 907,399 - +1.0 907,405 - +0.1 907,408 + +0.1 907,457 + -0.9 907,457 + +0.9 907,457 + +0.3 907,457 + -1.0 907,458 - -0.5 907,776 - -1.0 907,787 + -0.6 907,788 - -1.3 907,788 - -1.2 907,828 - -0.7 907,852 + -0.5 907,852 + -0.9 907,872 - -0.5 907,873 + -0.9 907,873 + +1.4 907,873 + -0.9 907,874 - -0.7 907,874 - -0.6 907,876 + -0.1 907,876 + -0.6 907,876 + -0.2 907,876 + -0.9 907,877 - -1.0 907,921 + +0.9 907,921 + +0.3 907,940 + +0.4 907,952 + +1.0 907,952 + -0.5 908,069 - CA264_03900 0.17 -0.2
Or see this region's nucleotide sequence