Experiment: m.b. A22 0.04 mg/ml
Only strains with sufficient reads to estimate fitness are shown,
but the strain fitness values are still rather noisy and may be biased towards zero.
Strains near the edge of a gene are not shown as being associated with that
gene (they are in grey).
Strains in the central 10-90% of a gene are color coded by the insertion's strand.
Usually, "+" means that the selectable marker is encoded on the forward strand,
i.e., transcribed rightward.
500 nt CA264_03825 and CA264_03830 are separated by 50 nucleotides CA264_03830 and CA264_03835 are separated by 50 nucleotides CA264_03835 and CA264_03840 are separated by 67 nucleotides CA264_03840 and CA264_03845 are separated by 6 nucleotides
CA264_03825: CA264_03825 - phosphate acyltransferase PlsX, at 894,101 to 895,042
_03825
CA264_03830: CA264_03830 - 50S ribosomal protein L32, at 895,093 to 895,290
_03830
CA264_03835: CA264_03835 - hypothetical protein, at 895,341 to 895,886
_03835
CA264_03840: CA264_03840 - 4-hydroxythreonine-4-phosphate dehydrogenase PdxA, at 895,954 to 896,976
_03840
CA264_03845: CA264_03845 - peptidase M17, at 896,983 to 898,416
_03845
Position (kb) 895
896
897 Strain fitness (log2 ratio) -3
-2
-1
0
1
2
3
4 at 895.433 kb on - strand, within CA264_03835 at 895.433 kb on - strand, within CA264_03835 at 895.526 kb on - strand, within CA264_03835 at 895.812 kb on + strand, within CA264_03835 at 895.875 kb on + strand at 895.876 kb on - strand at 895.955 kb on + strand at 897.012 kb on - strand at 897.012 kb on - strand at 897.022 kb on + strand at 897.023 kb on - strand at 897.074 kb on + strand at 897.075 kb on - strand at 897.075 kb on - strand at 897.111 kb on - strand at 897.178 kb on - strand, within CA264_03845 at 897.211 kb on - strand, within CA264_03845 at 897.241 kb on - strand, within CA264_03845 at 897.282 kb on + strand, within CA264_03845 at 897.282 kb on + strand, within CA264_03845 at 897.384 kb on + strand, within CA264_03845 at 897.384 kb on + strand, within CA264_03845 at 897.387 kb on - strand, within CA264_03845 at 897.418 kb on + strand, within CA264_03845 at 897.418 kb on + strand, within CA264_03845 at 897.419 kb on - strand, within CA264_03845 at 897.448 kb on + strand, within CA264_03845 at 897.561 kb on + strand, within CA264_03845 at 897.561 kb on + strand, within CA264_03845 at 897.658 kb on + strand, within CA264_03845 at 897.658 kb on + strand, within CA264_03845 at 897.674 kb on + strand, within CA264_03845 at 897.701 kb on + strand, within CA264_03845 at 897.701 kb on + strand, within CA264_03845 at 897.702 kb on - strand, within CA264_03845 at 897.702 kb on - strand, within CA264_03845 at 897.811 kb on + strand, within CA264_03845 at 897.817 kb on + strand, within CA264_03845 at 897.818 kb on - strand, within CA264_03845
Per-strain Table
Position Strand Gene LocusTag Fraction m.b. A22 0.04 mg/ml remove 895,433 - CA264_03835 0.17 +0.3 895,433 - CA264_03835 0.17 +1.1 895,526 - CA264_03835 0.34 -0.9 895,812 + CA264_03835 0.86 -2.2 895,875 + -2.9 895,876 - +0.9 895,955 + +1.4 897,012 - +2.7 897,012 - +2.8 897,022 + +2.1 897,023 - +2.2 897,074 + +1.3 897,075 - +1.8 897,075 - +1.7 897,111 - +2.2 897,178 - CA264_03845 0.14 +2.3 897,211 - CA264_03845 0.16 +4.4 897,241 - CA264_03845 0.18 +3.1 897,282 + CA264_03845 0.21 +1.8 897,282 + CA264_03845 0.21 +1.7 897,384 + CA264_03845 0.28 +1.9 897,384 + CA264_03845 0.28 +1.7 897,387 - CA264_03845 0.28 +2.9 897,418 + CA264_03845 0.30 -0.3 897,418 + CA264_03845 0.30 +1.3 897,419 - CA264_03845 0.30 +2.1 897,448 + CA264_03845 0.32 +1.0 897,561 + CA264_03845 0.40 -0.4 897,561 + CA264_03845 0.40 +1.4 897,658 + CA264_03845 0.47 +1.7 897,658 + CA264_03845 0.47 +1.2 897,674 + CA264_03845 0.48 +1.6 897,701 + CA264_03845 0.50 +1.5 897,701 + CA264_03845 0.50 +1.6 897,702 - CA264_03845 0.50 +2.2 897,702 - CA264_03845 0.50 +2.2 897,811 + CA264_03845 0.58 +2.1 897,817 + CA264_03845 0.58 +2.4 897,818 - CA264_03845 0.58 +0.9
Or see this region's nucleotide sequence