Experiment: m.b. A22 0.04 mg/ml
Only strains with sufficient reads to estimate fitness are shown,
but the strain fitness values are still rather noisy and may be biased towards zero.
Strains near the edge of a gene are not shown as being associated with that
gene (they are in grey).
Strains in the central 10-90% of a gene are color coded by the insertion's strand.
Usually, "+" means that the selectable marker is encoded on the forward strand,
i.e., transcribed rightward.
500 nt CA264_03240 and CA264_03245 are separated by 44 nucleotides CA264_03245 and CA264_03250 are separated by 38 nucleotides
CA264_03240: CA264_03240 - metal transporter, at 762,772 to 764,670
_03240
CA264_03245: CA264_03245 - four helix bundle protein, at 764,715 to 765,092
_03245
CA264_03250: CA264_03250 - metal transporter, at 765,131 to 766,405
_03250
Position (kb) 764
765
766 Strain fitness (log2 ratio) -2
-1
0
1 at 763.811 kb on + strand, within CA264_03240 at 763.811 kb on + strand, within CA264_03240 at 763.812 kb on - strand, within CA264_03240 at 763.852 kb on + strand, within CA264_03240 at 763.853 kb on - strand, within CA264_03240 at 763.896 kb on - strand, within CA264_03240 at 763.897 kb on + strand, within CA264_03240 at 763.897 kb on + strand, within CA264_03240 at 763.897 kb on + strand, within CA264_03240 at 763.898 kb on - strand, within CA264_03240 at 763.998 kb on + strand, within CA264_03240 at 764.086 kb on - strand, within CA264_03240 at 764.147 kb on - strand, within CA264_03240 at 764.212 kb on + strand, within CA264_03240 at 764.245 kb on - strand, within CA264_03240 at 764.269 kb on - strand, within CA264_03240 at 764.493 kb on + strand at 764.493 kb on + strand at 764.497 kb on + strand at 764.498 kb on - strand at 764.498 kb on - strand at 764.498 kb on - strand at 764.499 kb on + strand at 764.499 kb on + strand at 764.592 kb on + strand at 764.790 kb on - strand, within CA264_03245 at 764.799 kb on - strand, within CA264_03245 at 764.867 kb on + strand, within CA264_03245 at 764.867 kb on + strand, within CA264_03245 at 764.867 kb on + strand, within CA264_03245 at 764.868 kb on - strand, within CA264_03245 at 764.868 kb on - strand, within CA264_03245 at 764.868 kb on - strand, within CA264_03245 at 764.868 kb on - strand, within CA264_03245 at 764.871 kb on + strand, within CA264_03245 at 764.968 kb on - strand, within CA264_03245 at 764.973 kb on - strand, within CA264_03245 at 765.077 kb on + strand at 765.402 kb on - strand, within CA264_03250 at 765.412 kb on + strand, within CA264_03250 at 765.442 kb on - strand, within CA264_03250 at 765.483 kb on - strand, within CA264_03250 at 765.726 kb on + strand, within CA264_03250 at 765.727 kb on - strand, within CA264_03250 at 765.727 kb on - strand, within CA264_03250 at 765.772 kb on + strand, within CA264_03250 at 765.772 kb on + strand, within CA264_03250 at 765.816 kb on + strand, within CA264_03250 at 765.816 kb on + strand, within CA264_03250 at 765.816 kb on + strand, within CA264_03250 at 765.817 kb on - strand, within CA264_03250 at 765.817 kb on - strand, within CA264_03250 at 765.817 kb on - strand, within CA264_03250 at 765.819 kb on + strand, within CA264_03250 at 765.820 kb on - strand, within CA264_03250 at 765.824 kb on - strand, within CA264_03250 at 765.830 kb on - strand, within CA264_03250 at 765.924 kb on + strand, within CA264_03250 at 765.924 kb on + strand, within CA264_03250 at 765.979 kb on + strand, within CA264_03250 at 765.980 kb on - strand, within CA264_03250 at 765.998 kb on + strand, within CA264_03250
Per-strain Table
Position Strand Gene LocusTag Fraction m.b. A22 0.04 mg/ml remove 763,811 + CA264_03240 0.55 -0.6 763,811 + CA264_03240 0.55 -0.6 763,812 - CA264_03240 0.55 -1.0 763,852 + CA264_03240 0.57 -0.8 763,853 - CA264_03240 0.57 +1.1 763,896 - CA264_03240 0.59 +0.2 763,897 + CA264_03240 0.59 +0.3 763,897 + CA264_03240 0.59 -0.9 763,897 + CA264_03240 0.59 -1.0 763,898 - CA264_03240 0.59 +0.9 763,998 + CA264_03240 0.65 +1.1 764,086 - CA264_03240 0.69 -1.4 764,147 - CA264_03240 0.72 +0.4 764,212 + CA264_03240 0.76 +0.1 764,245 - CA264_03240 0.78 -0.1 764,269 - CA264_03240 0.79 -1.7 764,493 + -0.3 764,493 + +0.7 764,497 + -1.0 764,498 - -0.1 764,498 - -0.2 764,498 - -0.6 764,499 + +0.1 764,499 + -0.5 764,592 + -0.8 764,790 - CA264_03245 0.20 -0.4 764,799 - CA264_03245 0.22 -0.7 764,867 + CA264_03245 0.40 -0.8 764,867 + CA264_03245 0.40 -1.3 764,867 + CA264_03245 0.40 -0.9 764,868 - CA264_03245 0.40 -2.1 764,868 - CA264_03245 0.40 -1.4 764,868 - CA264_03245 0.40 -0.0 764,868 - CA264_03245 0.40 -1.3 764,871 + CA264_03245 0.41 -1.4 764,968 - CA264_03245 0.67 -2.4 764,973 - CA264_03245 0.68 -0.1 765,077 + -1.2 765,402 - CA264_03250 0.21 -1.5 765,412 + CA264_03250 0.22 +0.2 765,442 - CA264_03250 0.24 -0.9 765,483 - CA264_03250 0.28 -1.0 765,726 + CA264_03250 0.47 -0.2 765,727 - CA264_03250 0.47 -1.7 765,727 - CA264_03250 0.47 -0.8 765,772 + CA264_03250 0.50 +1.1 765,772 + CA264_03250 0.50 -0.4 765,816 + CA264_03250 0.54 -0.5 765,816 + CA264_03250 0.54 -0.3 765,816 + CA264_03250 0.54 +0.1 765,817 - CA264_03250 0.54 -1.3 765,817 - CA264_03250 0.54 -1.0 765,817 - CA264_03250 0.54 -0.9 765,819 + CA264_03250 0.54 -0.0 765,820 - CA264_03250 0.54 +0.2 765,824 - CA264_03250 0.54 -2.7 765,830 - CA264_03250 0.55 -0.6 765,924 + CA264_03250 0.62 -0.3 765,924 + CA264_03250 0.62 -0.0 765,979 + CA264_03250 0.67 -0.4 765,980 - CA264_03250 0.67 -0.6 765,998 + CA264_03250 0.68 -0.4
Or see this region's nucleotide sequence