Strain Fitness in Pontibacter actiniarum KMM 6156, DSM 19842 around CA264_03100

Experiment: m.b. A22 0.04 mg/ml

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Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

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500 ntCA264_03095 and CA264_03100 are separated by 76 nucleotidesCA264_03100 and CA264_03105 are separated by 173 nucleotides CA264_03095: CA264_03095 - hypothetical protein, at 722,262 to 722,699 _03095 CA264_03100: CA264_03100 - Xaa-Pro aminopeptidase, at 722,776 to 724,551 _03100 CA264_03105: CA264_03105 - T9SS C-terminal target domain-containing protein, at 724,725 to 726,305 _03105 Position (kb) 722 723 724 725Strain fitness (log2 ratio) -2 -1 0 1 2at 721.802 kb on + strandat 721.817 kb on + strandat 721.822 kb on + strandat 721.822 kb on + strandat 721.822 kb on + strandat 721.823 kb on - strandat 721.825 kb on + strandat 721.825 kb on + strandat 721.831 kb on + strandat 721.922 kb on + strandat 721.922 kb on + strandat 721.923 kb on - strandat 721.923 kb on - strandat 722.041 kb on - strandat 722.045 kb on + strandat 722.045 kb on + strandat 722.046 kb on - strandat 722.118 kb on + strandat 722.119 kb on - strandat 722.128 kb on + strandat 722.128 kb on + strandat 722.134 kb on + strandat 722.211 kb on + strandat 722.211 kb on + strandat 722.211 kb on + strandat 722.212 kb on - strandat 722.212 kb on - strandat 722.212 kb on - strandat 722.350 kb on + strand, within CA264_03095at 722.350 kb on + strand, within CA264_03095at 722.350 kb on + strand, within CA264_03095at 722.351 kb on - strand, within CA264_03095at 722.483 kb on + strand, within CA264_03095at 722.509 kb on + strand, within CA264_03095at 722.510 kb on - strand, within CA264_03095at 722.583 kb on + strand, within CA264_03095at 722.583 kb on + strand, within CA264_03095at 722.592 kb on + strand, within CA264_03095at 722.593 kb on - strand, within CA264_03095at 722.603 kb on - strand, within CA264_03095at 722.625 kb on + strand, within CA264_03095at 722.625 kb on + strand, within CA264_03095at 722.625 kb on + strand, within CA264_03095at 722.626 kb on - strand, within CA264_03095at 722.628 kb on - strand, within CA264_03095at 722.641 kb on + strand, within CA264_03095at 722.641 kb on + strand, within CA264_03095at 722.642 kb on - strand, within CA264_03095at 722.745 kb on + strandat 722.773 kb on + strandat 722.773 kb on + strandat 722.875 kb on + strandat 722.875 kb on + strandat 722.876 kb on - strandat 722.876 kb on - strandat 722.890 kb on + strandat 722.966 kb on + strand, within CA264_03100at 722.966 kb on + strand, within CA264_03100at 723.269 kb on + strand, within CA264_03100at 723.270 kb on - strand, within CA264_03100at 723.378 kb on + strand, within CA264_03100at 723.516 kb on - strand, within CA264_03100at 723.535 kb on - strand, within CA264_03100at 723.601 kb on + strand, within CA264_03100at 723.602 kb on - strand, within CA264_03100at 723.611 kb on - strand, within CA264_03100at 723.973 kb on + strand, within CA264_03100at 724.040 kb on + strand, within CA264_03100at 724.040 kb on + strand, within CA264_03100at 724.040 kb on + strand, within CA264_03100at 724.041 kb on - strand, within CA264_03100at 724.046 kb on - strand, within CA264_03100at 724.046 kb on - strand, within CA264_03100at 724.047 kb on + strand, within CA264_03100at 724.047 kb on + strand, within CA264_03100at 724.048 kb on - strand, within CA264_03100at 724.048 kb on - strand, within CA264_03100at 724.150 kb on + strand, within CA264_03100at 724.163 kb on - strand, within CA264_03100at 724.223 kb on + strand, within CA264_03100at 724.227 kb on + strand, within CA264_03100at 724.227 kb on + strand, within CA264_03100at 724.227 kb on + strand, within CA264_03100at 724.291 kb on + strand, within CA264_03100at 724.584 kb on - strandat 724.699 kb on + strandat 724.708 kb on - strandat 724.708 kb on - strandat 724.708 kb on - strandat 724.717 kb on + strandat 724.725 kb on - strandat 724.725 kb on - strandat 724.725 kb on - strandat 724.741 kb on + strandat 724.917 kb on + strand, within CA264_03105at 724.918 kb on - strand, within CA264_03105at 725.042 kb on + strand, within CA264_03105at 725.106 kb on + strand, within CA264_03105at 725.107 kb on - strand, within CA264_03105at 725.112 kb on + strand, within CA264_03105at 725.112 kb on + strand, within CA264_03105at 725.130 kb on - strand, within CA264_03105at 725.149 kb on - strand, within CA264_03105at 725.236 kb on - strand, within CA264_03105at 725.283 kb on + strand, within CA264_03105at 725.284 kb on - strand, within CA264_03105at 725.291 kb on + strand, within CA264_03105at 725.291 kb on + strand, within CA264_03105at 725.356 kb on - strand, within CA264_03105at 725.361 kb on + strand, within CA264_03105at 725.362 kb on - strand, within CA264_03105at 725.362 kb on - strand, within CA264_03105at 725.362 kb on - strand, within CA264_03105

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Per-strain Table

Position Strand Gene LocusTag Fraction m.b. A22 0.04 mg/ml
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721,802 + -0.5
721,817 + -0.2
721,822 + -0.3
721,822 + -0.5
721,822 + +0.6
721,823 - +0.1
721,825 + +0.4
721,825 + +0.6
721,831 + +0.7
721,922 + -0.5
721,922 + +0.5
721,923 - -0.1
721,923 - -0.1
722,041 - -0.2
722,045 + -0.2
722,045 + +0.3
722,046 - +1.3
722,118 + +1.8
722,119 - -0.7
722,128 + -0.4
722,128 + -0.6
722,134 + +0.2
722,211 + +0.4
722,211 + +0.2
722,211 + +0.3
722,212 - +0.1
722,212 - -0.5
722,212 - -1.2
722,350 + CA264_03095 0.20 +0.9
722,350 + CA264_03095 0.20 +0.3
722,350 + CA264_03095 0.20 +0.5
722,351 - CA264_03095 0.20 -0.9
722,483 + CA264_03095 0.50 +0.5
722,509 + CA264_03095 0.56 -0.4
722,510 - CA264_03095 0.57 -1.0
722,583 + CA264_03095 0.73 +0.5
722,583 + CA264_03095 0.73 -0.2
722,592 + CA264_03095 0.75 +0.4
722,593 - CA264_03095 0.76 -0.7
722,603 - CA264_03095 0.78 -1.6
722,625 + CA264_03095 0.83 +0.5
722,625 + CA264_03095 0.83 +0.0
722,625 + CA264_03095 0.83 +0.6
722,626 - CA264_03095 0.83 -1.3
722,628 - CA264_03095 0.84 -1.8
722,641 + CA264_03095 0.87 +0.9
722,641 + CA264_03095 0.87 +0.9
722,642 - CA264_03095 0.87 -1.3
722,745 + -0.0
722,773 + +0.0
722,773 + +0.9
722,875 + +0.9
722,875 + +0.6
722,876 - +0.3
722,876 - -1.2
722,890 + +0.7
722,966 + CA264_03100 0.11 +1.6
722,966 + CA264_03100 0.11 +0.9
723,269 + CA264_03100 0.28 +1.0
723,270 - CA264_03100 0.28 +0.9
723,378 + CA264_03100 0.34 +0.5
723,516 - CA264_03100 0.42 +0.8
723,535 - CA264_03100 0.43 -0.4
723,601 + CA264_03100 0.46 +1.2
723,602 - CA264_03100 0.47 +0.8
723,611 - CA264_03100 0.47 +0.8
723,973 + CA264_03100 0.67 +1.1
724,040 + CA264_03100 0.71 +1.1
724,040 + CA264_03100 0.71 +1.4
724,040 + CA264_03100 0.71 +0.6
724,041 - CA264_03100 0.71 +0.5
724,046 - CA264_03100 0.72 +0.5
724,046 - CA264_03100 0.72 +0.8
724,047 + CA264_03100 0.72 +0.6
724,047 + CA264_03100 0.72 +0.5
724,048 - CA264_03100 0.72 +1.3
724,048 - CA264_03100 0.72 +1.2
724,150 + CA264_03100 0.77 +1.0
724,163 - CA264_03100 0.78 +0.4
724,223 + CA264_03100 0.81 +0.1
724,227 + CA264_03100 0.82 +0.8
724,227 + CA264_03100 0.82 +1.1
724,227 + CA264_03100 0.82 +1.8
724,291 + CA264_03100 0.85 +1.0
724,584 - +1.2
724,699 + +0.5
724,708 - +0.3
724,708 - +0.1
724,708 - +0.4
724,717 + +0.8
724,725 - -0.1
724,725 - -1.0
724,725 - -0.2
724,741 + +0.0
724,917 + CA264_03105 0.12 -0.3
724,918 - CA264_03105 0.12 +1.3
725,042 + CA264_03105 0.20 +0.1
725,106 + CA264_03105 0.24 +0.3
725,107 - CA264_03105 0.24 -0.1
725,112 + CA264_03105 0.24 +0.8
725,112 + CA264_03105 0.24 +0.1
725,130 - CA264_03105 0.26 +0.7
725,149 - CA264_03105 0.27 -0.1
725,236 - CA264_03105 0.32 -1.3
725,283 + CA264_03105 0.35 -0.2
725,284 - CA264_03105 0.35 +0.2
725,291 + CA264_03105 0.36 +0.4
725,291 + CA264_03105 0.36 -0.4
725,356 - CA264_03105 0.40 +0.1
725,361 + CA264_03105 0.40 +0.8
725,362 - CA264_03105 0.40 -0.3
725,362 - CA264_03105 0.40 -0.0
725,362 - CA264_03105 0.40 -0.4

Or see this region's nucleotide sequence