Experiment: m.b. A22 0.04 mg/ml
Only strains with sufficient reads to estimate fitness are shown,
but the strain fitness values are still rather noisy and may be biased towards zero.
Strains near the edge of a gene are not shown as being associated with that
gene (they are in grey).
Strains in the central 10-90% of a gene are color coded by the insertion's strand.
Usually, "+" means that the selectable marker is encoded on the forward strand,
i.e., transcribed rightward.
500 nt CA264_02775 and CA264_02780 are separated by 206 nucleotides CA264_02780 and CA264_02785 are separated by 164 nucleotides CA264_02785 and CA264_02790 are separated by 86 nucleotides CA264_02790 and CA264_02795 are separated by 8 nucleotides
CA264_02775: CA264_02775 - glutathione-dependent formaldehyde dehydrogenase, at 639,899 to 641,068
_02775
CA264_02780: CA264_02780 - hypothetical protein, at 641,275 to 641,808
_02780
CA264_02785: CA264_02785 - membrane-binding protein, at 641,973 to 642,875
_02785
CA264_02790: CA264_02790 - DUF2807 domain-containing protein, at 642,962 to 643,678
_02790
CA264_02795: CA264_02795 - hypothetical protein, at 643,687 to 644,271
_02795
Position (kb) 641
642
643 Strain fitness (log2 ratio) -2
-1
0
1
2 at 641.012 kb on + strand at 641.012 kb on + strand at 641.045 kb on - strand at 641.045 kb on - strand at 641.194 kb on + strand at 641.194 kb on + strand at 641.195 kb on - strand at 641.195 kb on - strand at 641.195 kb on - strand at 641.196 kb on + strand at 641.196 kb on + strand at 641.196 kb on + strand at 641.196 kb on + strand at 641.197 kb on - strand at 641.197 kb on - strand at 641.197 kb on - strand at 641.203 kb on - strand at 641.203 kb on - strand at 641.530 kb on - strand, within CA264_02780 at 641.599 kb on - strand, within CA264_02780 at 641.608 kb on + strand, within CA264_02780 at 641.609 kb on - strand, within CA264_02780 at 641.653 kb on + strand, within CA264_02780 at 641.654 kb on - strand, within CA264_02780 at 641.658 kb on - strand, within CA264_02780 at 641.681 kb on + strand, within CA264_02780 at 641.682 kb on - strand, within CA264_02780 at 641.715 kb on + strand, within CA264_02780 at 641.738 kb on + strand, within CA264_02780 at 641.758 kb on - strand at 641.899 kb on + strand at 641.900 kb on - strand at 641.911 kb on + strand at 641.966 kb on - strand at 641.968 kb on + strand at 641.968 kb on + strand at 641.969 kb on - strand at 641.969 kb on - strand at 641.969 kb on - strand at 641.970 kb on + strand at 641.970 kb on + strand at 641.970 kb on + strand at 641.970 kb on + strand at 641.972 kb on + strand at 641.994 kb on - strand at 642.125 kb on - strand, within CA264_02785 at 642.189 kb on + strand, within CA264_02785 at 642.190 kb on - strand, within CA264_02785 at 642.206 kb on + strand, within CA264_02785 at 642.207 kb on - strand, within CA264_02785 at 642.237 kb on - strand, within CA264_02785 at 642.272 kb on - strand, within CA264_02785 at 642.275 kb on + strand, within CA264_02785 at 642.276 kb on - strand, within CA264_02785 at 642.277 kb on + strand, within CA264_02785 at 642.277 kb on + strand, within CA264_02785 at 642.382 kb on + strand, within CA264_02785 at 642.382 kb on + strand, within CA264_02785 at 642.383 kb on - strand, within CA264_02785 at 642.780 kb on + strand, within CA264_02785 at 642.783 kb on + strand, within CA264_02785 at 642.783 kb on + strand, within CA264_02785 at 642.894 kb on + strand at 642.894 kb on + strand at 642.917 kb on + strand at 642.919 kb on + strand at 642.926 kb on + strand at 642.926 kb on + strand at 642.948 kb on - strand at 642.956 kb on - strand at 643.073 kb on - strand, within CA264_02790 at 643.107 kb on + strand, within CA264_02790 at 643.268 kb on + strand, within CA264_02790 at 643.268 kb on + strand, within CA264_02790 at 643.268 kb on + strand, within CA264_02790 at 643.269 kb on - strand, within CA264_02790 at 643.269 kb on - strand, within CA264_02790 at 643.279 kb on - strand, within CA264_02790 at 643.287 kb on + strand, within CA264_02790 at 643.421 kb on - strand, within CA264_02790 at 643.421 kb on - strand, within CA264_02790 at 643.421 kb on - strand, within CA264_02790 at 643.474 kb on - strand, within CA264_02790 at 643.474 kb on - strand, within CA264_02790 at 643.474 kb on - strand, within CA264_02790 at 643.474 kb on - strand, within CA264_02790 at 643.533 kb on + strand, within CA264_02790 at 643.534 kb on - strand, within CA264_02790 at 643.534 kb on - strand, within CA264_02790 at 643.539 kb on + strand, within CA264_02790 at 643.563 kb on + strand, within CA264_02790 at 643.612 kb on - strand at 643.613 kb on + strand at 643.614 kb on - strand at 643.616 kb on + strand at 643.616 kb on + strand at 643.616 kb on + strand at 643.616 kb on + strand at 643.616 kb on + strand at 643.616 kb on + strand at 643.616 kb on + strand at 643.617 kb on - strand at 643.617 kb on - strand at 643.617 kb on - strand at 643.670 kb on - strand at 643.677 kb on - strand at 643.682 kb on + strand at 643.682 kb on + strand at 643.683 kb on - strand at 643.696 kb on - strand at 643.708 kb on + strand at 643.750 kb on - strand, within CA264_02795 at 643.750 kb on - strand, within CA264_02795 at 643.790 kb on - strand, within CA264_02795 at 643.791 kb on + strand, within CA264_02795 at 643.792 kb on - strand, within CA264_02795 at 643.806 kb on - strand, within CA264_02795 at 643.829 kb on + strand, within CA264_02795
Per-strain Table
Position Strand Gene LocusTag Fraction m.b. A22 0.04 mg/ml remove 641,012 + +0.8 641,012 + +2.2 641,045 - -0.5 641,045 - -0.8 641,194 + -0.2 641,194 + -1.9 641,195 - -0.3 641,195 - -0.1 641,195 - -1.2 641,196 + +0.8 641,196 + +2.5 641,196 + -0.2 641,196 + +0.1 641,197 - -0.6 641,197 - -1.7 641,197 - -0.1 641,203 - +1.2 641,203 - -0.4 641,530 - CA264_02780 0.48 -0.3 641,599 - CA264_02780 0.61 -0.6 641,608 + CA264_02780 0.62 -0.4 641,609 - CA264_02780 0.63 +1.3 641,653 + CA264_02780 0.71 +0.7 641,654 - CA264_02780 0.71 -0.7 641,658 - CA264_02780 0.72 -0.7 641,681 + CA264_02780 0.76 -0.2 641,682 - CA264_02780 0.76 -0.7 641,715 + CA264_02780 0.82 -0.6 641,738 + CA264_02780 0.87 -1.0 641,758 - +0.2 641,899 + +0.5 641,900 - +0.4 641,911 + +0.1 641,966 - +0.3 641,968 + +0.6 641,968 + +1.0 641,969 - +1.8 641,969 - +0.9 641,969 - +0.5 641,970 + -0.2 641,970 + +1.6 641,970 + +0.7 641,970 + +0.2 641,972 + +1.0 641,994 - +0.2 642,125 - CA264_02785 0.17 +0.2 642,189 + CA264_02785 0.24 +1.8 642,190 - CA264_02785 0.24 +0.2 642,206 + CA264_02785 0.26 +0.4 642,207 - CA264_02785 0.26 +0.4 642,237 - CA264_02785 0.29 -0.2 642,272 - CA264_02785 0.33 +0.7 642,275 + CA264_02785 0.33 +0.3 642,276 - CA264_02785 0.34 +0.4 642,277 + CA264_02785 0.34 +0.0 642,277 + CA264_02785 0.34 +1.1 642,382 + CA264_02785 0.45 +0.5 642,382 + CA264_02785 0.45 +0.2 642,383 - CA264_02785 0.45 -0.3 642,780 + CA264_02785 0.89 +0.7 642,783 + CA264_02785 0.90 +0.9 642,783 + CA264_02785 0.90 +0.7 642,894 + +0.2 642,894 + +0.8 642,917 + +0.8 642,919 + +0.2 642,926 + +0.7 642,926 + -0.4 642,948 - +1.1 642,956 - +0.4 643,073 - CA264_02790 0.15 +0.5 643,107 + CA264_02790 0.20 +0.1 643,268 + CA264_02790 0.43 +1.0 643,268 + CA264_02790 0.43 -0.4 643,268 + CA264_02790 0.43 -1.6 643,269 - CA264_02790 0.43 -0.4 643,269 - CA264_02790 0.43 +0.2 643,279 - CA264_02790 0.44 +0.4 643,287 + CA264_02790 0.45 -0.4 643,421 - CA264_02790 0.64 -2.0 643,421 - CA264_02790 0.64 -1.3 643,421 - CA264_02790 0.64 -1.3 643,474 - CA264_02790 0.71 +0.9 643,474 - CA264_02790 0.71 -1.0 643,474 - CA264_02790 0.71 -0.6 643,474 - CA264_02790 0.71 -0.5 643,533 + CA264_02790 0.80 -0.4 643,534 - CA264_02790 0.80 -1.0 643,534 - CA264_02790 0.80 +0.1 643,539 + CA264_02790 0.80 +0.0 643,563 + CA264_02790 0.84 +1.2 643,612 - -0.1 643,613 + +0.4 643,614 - -1.2 643,616 + -0.1 643,616 + +0.8 643,616 + +0.3 643,616 + -0.5 643,616 + -0.0 643,616 + -0.2 643,616 + +0.5 643,617 - -0.7 643,617 - -0.4 643,617 - -0.7 643,670 - -1.0 643,677 - +0.0 643,682 + +0.0 643,682 + +0.3 643,683 - -1.9 643,696 - -0.2 643,708 + +1.0 643,750 - CA264_02795 0.11 -1.0 643,750 - CA264_02795 0.11 +0.2 643,790 - CA264_02795 0.18 -1.7 643,791 + CA264_02795 0.18 -0.3 643,792 - CA264_02795 0.18 -1.2 643,806 - CA264_02795 0.20 -1.1 643,829 + CA264_02795 0.24 +0.5
Or see this region's nucleotide sequence