Experiment: m.b. A22 0.04 mg/ml
Only strains with sufficient reads to estimate fitness are shown,
but the strain fitness values are still rather noisy and may be biased towards zero.
Strains near the edge of a gene are not shown as being associated with that
gene (they are in grey).
Strains in the central 10-90% of a gene are color coded by the insertion's strand.
Usually, "+" means that the selectable marker is encoded on the forward strand,
i.e., transcribed rightward.
500 nt CA264_01370 and CA264_01375 are separated by 168 nucleotides CA264_01375 and CA264_01380 are separated by 27 nucleotides
CA264_01370: CA264_01370 - hypothetical protein, at 325,822 to 329,289
_01370
CA264_01375: CA264_01375 - hypothetical protein, at 329,458 to 329,898
_01375
CA264_01380: CA264_01380 - ADP-L-glycero-D-mannoheptose-6-epimerase, at 329,926 to 330,891
_01380
Position (kb) 329
330 Strain fitness (log2 ratio) -3
-2
-1
0
1
2 at 328.663 kb on + strand, within CA264_01370 at 328.668 kb on + strand, within CA264_01370 at 328.688 kb on - strand, within CA264_01370 at 328.699 kb on + strand, within CA264_01370 at 328.830 kb on + strand, within CA264_01370 at 328.830 kb on + strand, within CA264_01370 at 328.831 kb on - strand, within CA264_01370 at 328.831 kb on - strand, within CA264_01370 at 328.881 kb on - strand, within CA264_01370 at 328.945 kb on - strand at 328.949 kb on - strand at 328.949 kb on - strand at 328.954 kb on + strand at 328.955 kb on - strand at 328.955 kb on - strand at 329.046 kb on - strand at 329.073 kb on + strand at 329.073 kb on + strand at 329.074 kb on - strand at 329.074 kb on - strand at 329.074 kb on - strand at 329.113 kb on + strand at 329.113 kb on + strand at 329.113 kb on + strand at 329.114 kb on - strand at 329.114 kb on - strand at 329.122 kb on + strand at 329.218 kb on + strand at 329.219 kb on - strand at 329.243 kb on + strand at 329.244 kb on - strand at 329.339 kb on + strand at 329.367 kb on + strand at 329.368 kb on - strand at 329.416 kb on + strand at 329.417 kb on - strand at 329.419 kb on + strand at 329.420 kb on - strand at 329.420 kb on - strand at 329.421 kb on + strand at 329.421 kb on + strand at 329.422 kb on - strand at 329.428 kb on - strand at 329.454 kb on + strand at 329.502 kb on - strand, within CA264_01375 at 329.525 kb on + strand, within CA264_01375 at 329.525 kb on + strand, within CA264_01375 at 329.549 kb on - strand, within CA264_01375 at 329.581 kb on - strand, within CA264_01375 at 329.584 kb on + strand, within CA264_01375 at 329.585 kb on - strand, within CA264_01375 at 329.585 kb on - strand, within CA264_01375 at 329.634 kb on + strand, within CA264_01375 at 329.711 kb on + strand, within CA264_01375 at 329.711 kb on + strand, within CA264_01375 at 329.712 kb on - strand, within CA264_01375 at 329.716 kb on + strand, within CA264_01375 at 329.743 kb on - strand, within CA264_01375 at 329.748 kb on - strand, within CA264_01375 at 329.783 kb on - strand, within CA264_01375 at 329.783 kb on - strand, within CA264_01375 at 329.799 kb on + strand, within CA264_01375 at 329.800 kb on - strand, within CA264_01375 at 329.804 kb on + strand, within CA264_01375 at 329.832 kb on + strand, within CA264_01375 at 329.832 kb on + strand, within CA264_01375 at 329.833 kb on - strand, within CA264_01375 at 329.833 kb on - strand, within CA264_01375 at 329.833 kb on - strand, within CA264_01375 at 329.833 kb on - strand, within CA264_01375 at 329.833 kb on - strand, within CA264_01375 at 329.844 kb on + strand, within CA264_01375 at 329.845 kb on - strand, within CA264_01375 at 329.901 kb on + strand at 329.903 kb on + strand at 329.927 kb on + strand at 329.927 kb on + strand at 329.928 kb on - strand at 329.933 kb on + strand at 330.883 kb on + strand at 330.886 kb on + strand
Per-strain Table
Position Strand Gene LocusTag Fraction m.b. A22 0.04 mg/ml remove 328,663 + CA264_01370 0.82 +0.4 328,668 + CA264_01370 0.82 -0.1 328,688 - CA264_01370 0.83 -1.1 328,699 + CA264_01370 0.83 +0.4 328,830 + CA264_01370 0.87 -0.7 328,830 + CA264_01370 0.87 +0.4 328,831 - CA264_01370 0.87 +0.3 328,831 - CA264_01370 0.87 +0.7 328,881 - CA264_01370 0.88 +0.5 328,945 - +0.3 328,949 - +1.3 328,949 - +0.7 328,954 + +0.4 328,955 - +0.3 328,955 - -0.1 329,046 - -0.3 329,073 + +0.2 329,073 + -0.2 329,074 - -0.2 329,074 - -1.1 329,074 - -0.1 329,113 + +0.1 329,113 + +0.5 329,113 + +0.6 329,114 - -0.8 329,114 - -0.1 329,122 + +0.2 329,218 + +0.3 329,219 - -0.1 329,243 + -0.6 329,244 - -0.8 329,339 + +0.6 329,367 + -1.0 329,368 - +0.5 329,416 + +0.6 329,417 - -0.5 329,419 + -0.2 329,420 - -0.8 329,420 - +0.2 329,421 + -0.2 329,421 + -0.4 329,422 - -1.1 329,428 - -0.1 329,454 + -0.9 329,502 - CA264_01375 0.10 -0.5 329,525 + CA264_01375 0.15 -0.6 329,525 + CA264_01375 0.15 +0.9 329,549 - CA264_01375 0.21 -1.7 329,581 - CA264_01375 0.28 -0.8 329,584 + CA264_01375 0.29 -0.3 329,585 - CA264_01375 0.29 -0.7 329,585 - CA264_01375 0.29 -0.6 329,634 + CA264_01375 0.40 -0.2 329,711 + CA264_01375 0.57 +0.4 329,711 + CA264_01375 0.57 +0.3 329,712 - CA264_01375 0.58 -1.5 329,716 + CA264_01375 0.59 +2.2 329,743 - CA264_01375 0.65 -1.3 329,748 - CA264_01375 0.66 -2.3 329,783 - CA264_01375 0.74 -0.7 329,783 - CA264_01375 0.74 +0.6 329,799 + CA264_01375 0.77 +0.8 329,800 - CA264_01375 0.78 -1.0 329,804 + CA264_01375 0.78 +0.1 329,832 + CA264_01375 0.85 +0.2 329,832 + CA264_01375 0.85 +0.6 329,833 - CA264_01375 0.85 -2.1 329,833 - CA264_01375 0.85 -0.9 329,833 - CA264_01375 0.85 +0.0 329,833 - CA264_01375 0.85 -0.4 329,833 - CA264_01375 0.85 -0.7 329,844 + CA264_01375 0.88 -1.2 329,845 - CA264_01375 0.88 -1.0 329,901 + -1.1 329,903 + -0.4 329,927 + +0.8 329,927 + -1.1 329,928 - +0.3 329,933 + -0.6 330,883 + -2.8 330,886 + -0.4
Or see this region's nucleotide sequence