Experiment: m.b. A22 0.04 mg/ml
Only strains with sufficient reads to estimate fitness are shown,
but the strain fitness values are still rather noisy and may be biased towards zero.
Strains near the edge of a gene are not shown as being associated with that
gene (they are in grey).
Strains in the central 10-90% of a gene are color coded by the insertion's strand.
Usually, "+" means that the selectable marker is encoded on the forward strand,
i.e., transcribed rightward.
500 nt CA264_01345 and CA264_01350 overlap by 23 nucleotides CA264_01350 and CA264_01355 are separated by 28 nucleotides CA264_01355 and CA264_01360 are separated by 104 nucleotides CA264_01360 and CA264_01365 are separated by 135 nucleotides
CA264_01345: CA264_01345 - SCO family protein, at 320,162 to 320,824
_01345
CA264_01350: CA264_01350 - hypothetical protein, at 320,802 to 321,356
_01350
CA264_01355: CA264_01355 - hypothetical protein, at 321,385 to 321,651
_01355
CA264_01360: CA264_01360 - DUF983 domain-containing protein, at 321,756 to 322,034
_01360
CA264_01365: CA264_01365 - two-component sensor histidine kinase, at 322,170 to 325,808
_01365
Position (kb) 321
322
323 Strain fitness (log2 ratio) -4
-3
-2
-1
0
1 at 320.793 kb on + strand at 321.354 kb on + strand at 321.378 kb on - strand at 321.760 kb on - strand at 321.760 kb on - strand at 321.825 kb on + strand, within CA264_01360 at 321.825 kb on + strand, within CA264_01360 at 321.826 kb on - strand, within CA264_01360 at 321.826 kb on - strand, within CA264_01360 at 321.827 kb on + strand, within CA264_01360 at 321.828 kb on - strand, within CA264_01360 at 321.828 kb on - strand, within CA264_01360 at 321.828 kb on - strand, within CA264_01360 at 321.847 kb on + strand, within CA264_01360 at 321.851 kb on + strand, within CA264_01360 at 321.851 kb on + strand, within CA264_01360 at 321.851 kb on + strand, within CA264_01360 at 321.852 kb on - strand, within CA264_01360 at 321.860 kb on + strand, within CA264_01360 at 321.860 kb on + strand, within CA264_01360 at 321.879 kb on + strand, within CA264_01360 at 321.879 kb on + strand, within CA264_01360 at 321.883 kb on - strand, within CA264_01360 at 321.912 kb on + strand, within CA264_01360 at 321.920 kb on + strand, within CA264_01360 at 321.943 kb on + strand, within CA264_01360 at 321.944 kb on - strand, within CA264_01360 at 321.980 kb on - strand, within CA264_01360 at 322.025 kb on - strand at 322.051 kb on - strand at 322.059 kb on + strand at 322.064 kb on + strand at 322.115 kb on + strand at 322.116 kb on - strand at 322.121 kb on + strand at 322.124 kb on - strand at 322.156 kb on + strand at 322.515 kb on + strand at 322.531 kb on + strand at 322.536 kb on + strand, within CA264_01365 at 322.538 kb on + strand, within CA264_01365 at 322.538 kb on + strand, within CA264_01365 at 322.538 kb on + strand, within CA264_01365 at 322.538 kb on + strand, within CA264_01365 at 322.779 kb on + strand, within CA264_01365 at 322.782 kb on + strand, within CA264_01365 at 322.801 kb on - strand, within CA264_01365
Per-strain Table
Position Strand Gene LocusTag Fraction m.b. A22 0.04 mg/ml remove 320,793 + -1.3 321,354 + -1.0 321,378 - -3.0 321,760 - +0.7 321,760 - +0.2 321,825 + CA264_01360 0.25 -1.1 321,825 + CA264_01360 0.25 -2.1 321,826 - CA264_01360 0.25 -3.3 321,826 - CA264_01360 0.25 -2.8 321,827 + CA264_01360 0.25 -1.4 321,828 - CA264_01360 0.26 -1.5 321,828 - CA264_01360 0.26 -1.7 321,828 - CA264_01360 0.26 -2.3 321,847 + CA264_01360 0.33 -1.3 321,851 + CA264_01360 0.34 -2.6 321,851 + CA264_01360 0.34 -0.1 321,851 + CA264_01360 0.34 -0.1 321,852 - CA264_01360 0.34 -2.1 321,860 + CA264_01360 0.37 -0.8 321,860 + CA264_01360 0.37 +0.0 321,879 + CA264_01360 0.44 -2.4 321,879 + CA264_01360 0.44 +0.2 321,883 - CA264_01360 0.46 -1.9 321,912 + CA264_01360 0.56 -1.9 321,920 + CA264_01360 0.59 -1.5 321,943 + CA264_01360 0.67 -1.4 321,944 - CA264_01360 0.67 -1.9 321,980 - CA264_01360 0.80 -2.8 322,025 - -2.1 322,051 - +1.2 322,059 + -1.4 322,064 + -0.8 322,115 + +0.2 322,116 - -0.8 322,121 + -0.7 322,124 - -3.5 322,156 + +1.6 322,515 + -2.7 322,531 + -0.1 322,536 + CA264_01365 0.10 -3.9 322,538 + CA264_01365 0.10 -3.0 322,538 + CA264_01365 0.10 -3.3 322,538 + CA264_01365 0.10 -2.1 322,538 + CA264_01365 0.10 -2.4 322,779 + CA264_01365 0.17 -0.7 322,782 + CA264_01365 0.17 -3.7 322,801 - CA264_01365 0.17 -2.0
Or see this region's nucleotide sequence