Experiment: m.b. A22 0.04 mg/ml
Only strains with sufficient reads to estimate fitness are shown,
but the strain fitness values are still rather noisy and may be biased towards zero.
Strains near the edge of a gene are not shown as being associated with that
gene (they are in grey).
Strains in the central 10-90% of a gene are color coded by the insertion's strand.
Usually, "+" means that the selectable marker is encoded on the forward strand,
i.e., transcribed rightward.
500 nt CA264_01255 and CA264_01260 are separated by 227 nucleotides CA264_01260 and CA264_01265 are separated by 99 nucleotides CA264_01265 and CA264_01270 are separated by 12 nucleotides CA264_01270 and CA264_01275 overlap by 1 nucleotides
CA264_01255: CA264_01255 - thioredoxin domain-containing protein, at 300,133 to 302,196
_01255
CA264_01260: CA264_01260 - hypothetical protein, at 302,424 to 303,404
_01260
CA264_01265: CA264_01265 - 50S ribosomal protein L9, at 303,504 to 303,947
_01265
CA264_01270: CA264_01270 - 30S ribosomal protein S18, at 303,960 to 304,211
_01270
CA264_01275: CA264_01275 - 30S ribosomal protein S6, at 304,211 to 304,579
_01275
Position (kb) 302
303
304 Strain fitness (log2 ratio) -2
-1
0
1
2
3 at 301.460 kb on + strand, within CA264_01255 at 301.461 kb on - strand, within CA264_01255 at 301.461 kb on - strand, within CA264_01255 at 301.492 kb on - strand, within CA264_01255 at 301.538 kb on + strand, within CA264_01255 at 301.557 kb on - strand, within CA264_01255 at 301.671 kb on + strand, within CA264_01255 at 301.689 kb on - strand, within CA264_01255 at 301.692 kb on + strand, within CA264_01255 at 301.692 kb on + strand, within CA264_01255 at 301.693 kb on - strand, within CA264_01255 at 301.693 kb on - strand, within CA264_01255 at 301.696 kb on + strand, within CA264_01255 at 301.697 kb on - strand, within CA264_01255 at 301.766 kb on + strand, within CA264_01255 at 301.817 kb on + strand, within CA264_01255 at 301.817 kb on + strand, within CA264_01255 at 301.910 kb on + strand, within CA264_01255 at 301.910 kb on + strand, within CA264_01255 at 301.911 kb on - strand, within CA264_01255 at 301.911 kb on - strand, within CA264_01255 at 302.130 kb on - strand at 302.164 kb on + strand at 302.164 kb on + strand at 302.165 kb on - strand at 302.165 kb on - strand at 302.202 kb on + strand at 302.202 kb on + strand at 302.203 kb on - strand at 302.203 kb on - strand at 302.231 kb on + strand at 302.325 kb on + strand at 302.325 kb on + strand at 302.325 kb on + strand at 302.326 kb on - strand at 302.332 kb on - strand at 302.369 kb on + strand at 302.407 kb on + strand at 302.545 kb on + strand, within CA264_01260 at 302.601 kb on - strand, within CA264_01260 at 302.601 kb on - strand, within CA264_01260 at 302.623 kb on + strand, within CA264_01260 at 302.634 kb on + strand, within CA264_01260 at 302.652 kb on - strand, within CA264_01260 at 302.652 kb on - strand, within CA264_01260 at 302.653 kb on + strand, within CA264_01260 at 302.654 kb on - strand, within CA264_01260 at 302.654 kb on - strand, within CA264_01260 at 302.654 kb on - strand, within CA264_01260 at 302.654 kb on - strand, within CA264_01260 at 302.734 kb on + strand, within CA264_01260 at 302.734 kb on + strand, within CA264_01260 at 302.734 kb on + strand, within CA264_01260 at 302.746 kb on + strand, within CA264_01260 at 302.902 kb on + strand, within CA264_01260 at 302.902 kb on + strand, within CA264_01260 at 302.902 kb on + strand, within CA264_01260 at 302.903 kb on - strand, within CA264_01260 at 302.903 kb on - strand, within CA264_01260 at 303.039 kb on + strand, within CA264_01260 at 303.040 kb on - strand, within CA264_01260 at 303.040 kb on - strand, within CA264_01260 at 303.041 kb on + strand, within CA264_01260 at 303.041 kb on + strand, within CA264_01260 at 303.067 kb on + strand, within CA264_01260 at 303.106 kb on - strand, within CA264_01260 at 303.106 kb on - strand, within CA264_01260 at 303.151 kb on + strand, within CA264_01260 at 303.151 kb on + strand, within CA264_01260 at 303.191 kb on + strand, within CA264_01260 at 303.200 kb on - strand, within CA264_01260 at 303.200 kb on - strand, within CA264_01260 at 303.382 kb on - strand at 303.428 kb on + strand at 303.438 kb on + strand at 303.480 kb on - strand at 303.609 kb on - strand, within CA264_01265 at 303.622 kb on - strand, within CA264_01265
Per-strain Table
Position Strand Gene LocusTag Fraction m.b. A22 0.04 mg/ml remove 301,460 + CA264_01255 0.64 +1.0 301,461 - CA264_01255 0.64 -0.2 301,461 - CA264_01255 0.64 -1.1 301,492 - CA264_01255 0.66 -0.2 301,538 + CA264_01255 0.68 +1.2 301,557 - CA264_01255 0.69 -0.0 301,671 + CA264_01255 0.75 -0.4 301,689 - CA264_01255 0.75 +0.8 301,692 + CA264_01255 0.76 +1.0 301,692 + CA264_01255 0.76 +2.5 301,693 - CA264_01255 0.76 +0.5 301,693 - CA264_01255 0.76 -0.5 301,696 + CA264_01255 0.76 +1.3 301,697 - CA264_01255 0.76 +1.0 301,766 + CA264_01255 0.79 +1.6 301,817 + CA264_01255 0.82 +1.5 301,817 + CA264_01255 0.82 +1.7 301,910 + CA264_01255 0.86 +1.9 301,910 + CA264_01255 0.86 +1.8 301,911 - CA264_01255 0.86 +0.1 301,911 - CA264_01255 0.86 +0.3 302,130 - +0.7 302,164 + +2.1 302,164 + +2.2 302,165 - -0.8 302,165 - +2.2 302,202 + +1.8 302,202 + +1.8 302,203 - -0.1 302,203 - -0.8 302,231 + +2.2 302,325 + +1.9 302,325 + +2.0 302,325 + +2.2 302,326 - +0.2 302,332 - +0.1 302,369 + +1.0 302,407 + +1.7 302,545 + CA264_01260 0.12 +1.4 302,601 - CA264_01260 0.18 +0.5 302,601 - CA264_01260 0.18 +0.3 302,623 + CA264_01260 0.20 +2.2 302,634 + CA264_01260 0.21 +1.7 302,652 - CA264_01260 0.23 -1.8 302,652 - CA264_01260 0.23 +0.6 302,653 + CA264_01260 0.23 +2.0 302,654 - CA264_01260 0.23 +1.4 302,654 - CA264_01260 0.23 +1.2 302,654 - CA264_01260 0.23 +1.3 302,654 - CA264_01260 0.23 +0.2 302,734 + CA264_01260 0.32 +1.6 302,734 + CA264_01260 0.32 +2.3 302,734 + CA264_01260 0.32 +1.8 302,746 + CA264_01260 0.33 +2.0 302,902 + CA264_01260 0.49 +0.8 302,902 + CA264_01260 0.49 +2.6 302,902 + CA264_01260 0.49 +2.2 302,903 - CA264_01260 0.49 +0.4 302,903 - CA264_01260 0.49 +1.2 303,039 + CA264_01260 0.63 +1.0 303,040 - CA264_01260 0.63 +0.5 303,040 - CA264_01260 0.63 +0.4 303,041 + CA264_01260 0.63 +1.9 303,041 + CA264_01260 0.63 +2.2 303,067 + CA264_01260 0.66 +2.7 303,106 - CA264_01260 0.70 +1.0 303,106 - CA264_01260 0.70 +0.3 303,151 + CA264_01260 0.74 +2.5 303,151 + CA264_01260 0.74 +1.9 303,191 + CA264_01260 0.78 +3.7 303,200 - CA264_01260 0.79 +0.5 303,200 - CA264_01260 0.79 +0.8 303,382 - +2.6 303,428 + +3.4 303,438 + +3.2 303,480 - +3.2 303,609 - CA264_01265 0.24 +2.7 303,622 - CA264_01265 0.27 +2.0
Or see this region's nucleotide sequence