Experiment: m.b. A22 0.04 mg/ml
Only strains with sufficient reads to estimate fitness are shown,
but the strain fitness values are still rather noisy and may be biased towards zero.
Strains near the edge of a gene are not shown as being associated with that
gene (they are in grey).
Strains in the central 10-90% of a gene are color coded by the insertion's strand.
Usually, "+" means that the selectable marker is encoded on the forward strand,
i.e., transcribed rightward.
500 nt CA264_01135 and CA264_01140 are separated by 54 nucleotides CA264_01140 and CA264_01145 are separated by 209 nucleotides
CA264_01135: CA264_01135 - uroporphyrinogen decarboxylase, at 250,469 to 251,509
_01135
CA264_01140: CA264_01140 - antibiotic resistance protein MarC, at 251,564 to 252,184
_01140
CA264_01145: CA264_01145 - dienelactone hydrolase, at 252,394 to 253,266
_01145
Position (kb) 251
252
253 Strain fitness (log2 ratio) -2
-1
0
1
2 at 251.548 kb on + strand at 251.548 kb on + strand at 251.549 kb on - strand at 251.549 kb on - strand at 251.549 kb on - strand at 251.549 kb on - strand at 251.565 kb on + strand at 251.582 kb on + strand at 251.583 kb on - strand at 251.583 kb on - strand at 251.583 kb on - strand at 251.585 kb on + strand at 251.586 kb on - strand at 251.586 kb on - strand at 251.605 kb on + strand at 251.674 kb on - strand, within CA264_01140 at 251.674 kb on - strand, within CA264_01140 at 251.678 kb on + strand, within CA264_01140 at 251.708 kb on - strand, within CA264_01140 at 251.708 kb on - strand, within CA264_01140 at 251.713 kb on + strand, within CA264_01140 at 251.746 kb on + strand, within CA264_01140 at 251.746 kb on + strand, within CA264_01140 at 251.747 kb on - strand, within CA264_01140 at 251.747 kb on - strand, within CA264_01140 at 251.764 kb on - strand, within CA264_01140 at 252.007 kb on - strand, within CA264_01140 at 252.048 kb on + strand, within CA264_01140 at 252.049 kb on - strand, within CA264_01140 at 252.049 kb on - strand, within CA264_01140 at 252.049 kb on - strand, within CA264_01140 at 252.140 kb on + strand at 252.141 kb on - strand at 252.141 kb on - strand at 252.173 kb on + strand at 252.173 kb on + strand at 252.174 kb on - strand at 252.174 kb on - strand at 252.174 kb on - strand at 252.176 kb on + strand at 252.176 kb on + strand at 252.177 kb on - strand at 252.184 kb on + strand at 252.184 kb on + strand at 252.185 kb on - strand at 252.195 kb on + strand at 252.196 kb on - strand at 252.224 kb on + strand at 252.350 kb on + strand at 252.351 kb on - strand at 252.395 kb on + strand at 252.461 kb on + strand at 252.462 kb on - strand at 252.462 kb on - strand at 252.503 kb on + strand, within CA264_01145 at 252.510 kb on + strand, within CA264_01145 at 252.605 kb on - strand, within CA264_01145 at 252.640 kb on - strand, within CA264_01145 at 252.659 kb on + strand, within CA264_01145 at 252.663 kb on - strand, within CA264_01145 at 252.770 kb on + strand, within CA264_01145 at 252.771 kb on - strand, within CA264_01145 at 252.857 kb on - strand, within CA264_01145 at 252.870 kb on - strand, within CA264_01145 at 252.901 kb on + strand, within CA264_01145 at 252.969 kb on + strand, within CA264_01145 at 252.970 kb on - strand, within CA264_01145 at 253.003 kb on - strand, within CA264_01145 at 253.047 kb on + strand, within CA264_01145 at 253.048 kb on - strand, within CA264_01145
Per-strain Table
Position Strand Gene LocusTag Fraction m.b. A22 0.04 mg/ml remove 251,548 + +0.5 251,548 + +0.3 251,549 - +0.3 251,549 - +0.7 251,549 - +1.6 251,549 - +0.5 251,565 + +0.4 251,582 + +0.3 251,583 - +0.4 251,583 - +0.9 251,583 - +0.0 251,585 + +0.0 251,586 - -0.2 251,586 - -0.5 251,605 + -0.7 251,674 - CA264_01140 0.18 +0.3 251,674 - CA264_01140 0.18 -0.3 251,678 + CA264_01140 0.18 +0.4 251,708 - CA264_01140 0.23 -0.2 251,708 - CA264_01140 0.23 +0.2 251,713 + CA264_01140 0.24 +0.6 251,746 + CA264_01140 0.29 +0.7 251,746 + CA264_01140 0.29 +1.3 251,747 - CA264_01140 0.29 -0.8 251,747 - CA264_01140 0.29 -0.2 251,764 - CA264_01140 0.32 -0.9 252,007 - CA264_01140 0.71 +1.0 252,048 + CA264_01140 0.78 +0.6 252,049 - CA264_01140 0.78 -0.3 252,049 - CA264_01140 0.78 +0.1 252,049 - CA264_01140 0.78 +1.4 252,140 + +0.7 252,141 - -0.8 252,141 - -0.1 252,173 + +0.0 252,173 + +0.8 252,174 - +0.1 252,174 - +0.0 252,174 - -0.3 252,176 + +0.1 252,176 + +0.6 252,177 - -0.5 252,184 + -1.1 252,184 + -0.6 252,185 - -1.1 252,195 + -0.9 252,196 - -1.9 252,224 + -0.3 252,350 + -0.6 252,351 - -1.3 252,395 + +0.3 252,461 + +0.3 252,462 - +1.7 252,462 - +1.0 252,503 + CA264_01145 0.12 -0.0 252,510 + CA264_01145 0.13 +0.3 252,605 - CA264_01145 0.24 +0.3 252,640 - CA264_01145 0.28 +2.0 252,659 + CA264_01145 0.30 -0.7 252,663 - CA264_01145 0.31 -0.0 252,770 + CA264_01145 0.43 +0.2 252,771 - CA264_01145 0.43 +0.4 252,857 - CA264_01145 0.53 +0.9 252,870 - CA264_01145 0.55 +1.2 252,901 + CA264_01145 0.58 +0.7 252,969 + CA264_01145 0.66 +1.2 252,970 - CA264_01145 0.66 +1.1 253,003 - CA264_01145 0.70 +0.8 253,047 + CA264_01145 0.75 +1.1 253,048 - CA264_01145 0.75 +1.3
Or see this region's nucleotide sequence