Experiment: m.b. A22 0.04 mg/ml
Only strains with sufficient reads to estimate fitness are shown,
but the strain fitness values are still rather noisy and may be biased towards zero.
Strains near the edge of a gene are not shown as being associated with that
gene (they are in grey).
Strains in the central 10-90% of a gene are color coded by the insertion's strand.
Usually, "+" means that the selectable marker is encoded on the forward strand,
i.e., transcribed rightward.
500 nt CA264_01060 and CA264_01065 are separated by 153 nucleotides CA264_01065 and CA264_01070 are separated by 39 nucleotides CA264_01070 and CA264_01075 are separated by 95 nucleotides
CA264_01060: CA264_01060 - hypothetical protein, at 233,710 to 234,744
_01060
CA264_01065: CA264_01065 - MarR family transcriptional regulator, at 234,898 to 235,347
_01065
CA264_01070: CA264_01070 - lipid-binding protein, at 235,387 to 236,046
_01070
CA264_01075: CA264_01075 - lipid-binding protein, at 236,142 to 236,807
_01075
Position (kb) 234
235
236 Strain fitness (log2 ratio) -4
-3
-2
-1
0
1 at 233.938 kb on + strand, within CA264_01060 at 233.938 kb on + strand, within CA264_01060 at 234.052 kb on + strand, within CA264_01060 at 234.052 kb on + strand, within CA264_01060 at 234.062 kb on - strand, within CA264_01060 at 234.209 kb on - strand, within CA264_01060 at 234.219 kb on - strand, within CA264_01060 at 234.251 kb on + strand, within CA264_01060 at 234.274 kb on - strand, within CA264_01060 at 234.343 kb on - strand, within CA264_01060 at 234.513 kb on + strand, within CA264_01060 at 234.514 kb on - strand, within CA264_01060 at 234.514 kb on - strand, within CA264_01060 at 234.539 kb on + strand, within CA264_01060 at 234.549 kb on - strand, within CA264_01060 at 234.733 kb on + strand at 234.743 kb on - strand at 234.783 kb on + strand at 234.906 kb on - strand at 234.955 kb on + strand, within CA264_01065 at 234.972 kb on + strand, within CA264_01065 at 235.039 kb on + strand, within CA264_01065 at 235.054 kb on - strand, within CA264_01065 at 235.356 kb on + strand at 235.356 kb on + strand at 235.359 kb on - strand at 235.359 kb on - strand at 235.374 kb on + strand at 235.380 kb on - strand at 235.380 kb on - strand at 235.442 kb on - strand at 235.482 kb on + strand, within CA264_01070 at 235.482 kb on + strand, within CA264_01070 at 235.482 kb on + strand, within CA264_01070 at 235.483 kb on - strand, within CA264_01070 at 235.516 kb on + strand, within CA264_01070 at 235.516 kb on + strand, within CA264_01070 at 235.519 kb on - strand, within CA264_01070 at 235.523 kb on + strand, within CA264_01070 at 235.524 kb on - strand, within CA264_01070 at 235.697 kb on - strand, within CA264_01070 at 235.830 kb on - strand, within CA264_01070 at 235.932 kb on - strand, within CA264_01070 at 235.932 kb on - strand, within CA264_01070 at 235.942 kb on - strand, within CA264_01070 at 236.123 kb on - strand at 236.128 kb on + strand at 236.128 kb on + strand at 236.129 kb on - strand at 236.130 kb on + strand at 236.130 kb on + strand
Per-strain Table
Position Strand Gene LocusTag Fraction m.b. A22 0.04 mg/ml remove 233,938 + CA264_01060 0.22 -0.8 233,938 + CA264_01060 0.22 -0.4 234,052 + CA264_01060 0.33 -1.3 234,052 + CA264_01060 0.33 -0.5 234,062 - CA264_01060 0.34 -0.3 234,209 - CA264_01060 0.48 -0.4 234,219 - CA264_01060 0.49 -0.7 234,251 + CA264_01060 0.52 -1.2 234,274 - CA264_01060 0.54 -0.5 234,343 - CA264_01060 0.61 -0.5 234,513 + CA264_01060 0.78 -1.4 234,514 - CA264_01060 0.78 -0.1 234,514 - CA264_01060 0.78 -2.0 234,539 + CA264_01060 0.80 -0.9 234,549 - CA264_01060 0.81 -0.9 234,733 + -1.6 234,743 - -1.8 234,783 + -1.2 234,906 - -2.0 234,955 + CA264_01065 0.13 -3.8 234,972 + CA264_01065 0.16 -1.5 235,039 + CA264_01065 0.31 -2.2 235,054 - CA264_01065 0.35 -1.4 235,356 + -0.7 235,356 + +0.6 235,359 - -0.1 235,359 - -2.8 235,374 + +0.2 235,380 - -1.0 235,380 - -1.6 235,442 - +0.2 235,482 + CA264_01070 0.14 +0.1 235,482 + CA264_01070 0.14 -0.4 235,482 + CA264_01070 0.14 -0.9 235,483 - CA264_01070 0.15 +0.6 235,516 + CA264_01070 0.20 -0.7 235,516 + CA264_01070 0.20 -0.8 235,519 - CA264_01070 0.20 -0.9 235,523 + CA264_01070 0.21 -1.7 235,524 - CA264_01070 0.21 -0.4 235,697 - CA264_01070 0.47 -2.2 235,830 - CA264_01070 0.67 -0.3 235,932 - CA264_01070 0.83 -1.2 235,932 - CA264_01070 0.83 -1.2 235,942 - CA264_01070 0.84 -0.3 236,123 - -0.1 236,128 + +0.8 236,128 + -0.6 236,129 - -0.1 236,130 + +0.5 236,130 + -1.8
Or see this region's nucleotide sequence