Experiment: m.b. A22 0.04 mg/ml
Only strains with sufficient reads to estimate fitness are shown,
but the strain fitness values are still rather noisy and may be biased towards zero.
Strains near the edge of a gene are not shown as being associated with that
gene (they are in grey).
Strains in the central 10-90% of a gene are color coded by the insertion's strand.
Usually, "+" means that the selectable marker is encoded on the forward strand,
i.e., transcribed rightward.
500 nt CA264_00415 and CA264_00420 are separated by 77 nucleotides CA264_00420 and CA264_00425 are separated by 254 nucleotides CA264_00425 and CA264_00430 are separated by 119 nucleotides
CA264_00415: CA264_00415 - aspartate kinase, at 90,200 to 91,474
_00415
CA264_00420: CA264_00420 - fructose-bisphosphatase class I, at 91,552 to 92,559
_00420
CA264_00425: CA264_00425 - hypothetical protein, at 92,814 to 93,122
_00425
CA264_00430: CA264_00430 - hypothetical protein, at 93,242 to 93,706
_00430
Position (kb)
91
92
93 Strain fitness (log2 ratio)
-3
-2
-1
0
1
2 at 91.122 kb on - strand, within CA264_00415 at 91.528 kb on - strand at 91.532 kb on + strand at 91.535 kb on - strand at 91.535 kb on - strand at 91.551 kb on + strand at 91.552 kb on - strand at 91.600 kb on - strand at 91.644 kb on - strand at 91.663 kb on - strand, within CA264_00420 at 91.778 kb on + strand, within CA264_00420 at 91.779 kb on - strand, within CA264_00420 at 91.837 kb on - strand, within CA264_00420 at 91.888 kb on + strand, within CA264_00420 at 91.888 kb on + strand, within CA264_00420 at 92.057 kb on - strand, within CA264_00420 at 92.113 kb on + strand, within CA264_00420 at 92.178 kb on + strand, within CA264_00420 at 92.199 kb on + strand, within CA264_00420 at 92.234 kb on - strand, within CA264_00420 at 92.243 kb on - strand, within CA264_00420 at 92.401 kb on - strand, within CA264_00420 at 92.522 kb on + strand at 92.522 kb on + strand at 92.546 kb on + strand at 92.582 kb on + strand at 92.587 kb on + strand at 92.587 kb on + strand at 92.588 kb on - strand at 92.588 kb on - strand at 92.738 kb on + strand at 92.738 kb on + strand at 92.788 kb on + strand at 93.060 kb on + strand, within CA264_00425 at 93.102 kb on + strand at 93.102 kb on + strand at 93.103 kb on - strand at 93.177 kb on - strand at 93.183 kb on - strand at 93.196 kb on + strand at 93.197 kb on - strand at 93.197 kb on - strand at 93.243 kb on + strand at 93.327 kb on + strand, within CA264_00430 at 93.378 kb on + strand, within CA264_00430 at 93.378 kb on + strand, within CA264_00430 at 93.379 kb on - strand, within CA264_00430 at 93.401 kb on - strand, within CA264_00430 at 93.407 kb on + strand, within CA264_00430 at 93.408 kb on - strand, within CA264_00430 at 93.474 kb on + strand, within CA264_00430 at 93.474 kb on + strand, within CA264_00430 at 93.537 kb on + strand, within CA264_00430 at 93.537 kb on + strand, within CA264_00430 at 93.538 kb on - strand, within CA264_00430 at 93.538 kb on - strand, within CA264_00430
Per-strain Table
Position Strand Gene LocusTag Fraction m.b. A22 0.04 mg/ml remove 91,122 - CA264_00415 0.72 -2.9 91,528 - +0.1 91,532 + -0.3 91,535 - +0.6 91,535 - +0.6 91,551 + +0.7 91,552 - +0.9 91,600 - +0.7 91,644 - +1.3 91,663 - CA264_00420 0.11 +0.5 91,778 + CA264_00420 0.22 +0.5 91,779 - CA264_00420 0.23 +0.9 91,837 - CA264_00420 0.28 +0.2 91,888 + CA264_00420 0.33 +1.1 91,888 + CA264_00420 0.33 +0.3 92,057 - CA264_00420 0.50 +0.9 92,113 + CA264_00420 0.56 +0.9 92,178 + CA264_00420 0.62 +0.6 92,199 + CA264_00420 0.64 +0.8 92,234 - CA264_00420 0.68 +0.9 92,243 - CA264_00420 0.69 +0.5 92,401 - CA264_00420 0.84 +0.5 92,522 + +0.5 92,522 + +1.2 92,546 + +0.0 92,582 + +0.7 92,587 + +0.2 92,587 + +2.0 92,588 - +0.4 92,588 - +0.9 92,738 + +1.2 92,738 + +0.3 92,788 + +1.0 93,060 + CA264_00425 0.80 +2.4 93,102 + -0.3 93,102 + -0.1 93,103 - +0.8 93,177 - -0.1 93,183 - -0.8 93,196 + +0.4 93,197 - +0.7 93,197 - -1.2 93,243 + -0.1 93,327 + CA264_00430 0.18 +1.4 93,378 + CA264_00430 0.29 +1.8 93,378 + CA264_00430 0.29 +0.4 93,379 - CA264_00430 0.29 +0.4 93,401 - CA264_00430 0.34 +1.0 93,407 + CA264_00430 0.35 +0.7 93,408 - CA264_00430 0.36 +1.7 93,474 + CA264_00430 0.50 -0.4 93,474 + CA264_00430 0.50 +0.7 93,537 + CA264_00430 0.63 +0.2 93,537 + CA264_00430 0.63 +1.3 93,538 - CA264_00430 0.64 +1.3 93,538 - CA264_00430 0.64 +1.5
Or see this region's nucleotide sequence