Experiment: m.b. A22 0.04 mg/ml
Only strains with sufficient reads to estimate fitness are shown,
but the strain fitness values are still rather noisy and may be biased towards zero.
Strains near the edge of a gene are not shown as being associated with that
gene (they are in grey).
Strains in the central 10-90% of a gene are color coded by the insertion's strand.
Usually, "+" means that the selectable marker is encoded on the forward strand,
i.e., transcribed rightward.
500 nt CA264_00130 and CA264_00135 are separated by 111 nucleotides CA264_00135 and CA264_00140 are separated by 242 nucleotides CA264_00140 and CA264_00145 are separated by 165 nucleotides CA264_00145 and CA264_00150 are separated by 107 nucleotides
CA264_00130: CA264_00130 - glyoxalase, at 35,512 to 36,021
_00130
CA264_00135: CA264_00135 - transcriptional regulator, at 36,133 to 36,453
_00135
CA264_00140: CA264_00140 - hypothetical protein, at 36,696 to 36,908
_00140
CA264_00145: CA264_00145 - DNA mismatch repair protein MutT, at 37,074 to 37,637
_00145
CA264_00150: CA264_00150 - 1-acyl-sn-glycerol-3-phosphate acyltransferase, at 37,745 to 38,551
_00150
Position (kb) 36
37 Strain fitness (log2 ratio) -4
-3
-2
-1
0
1
2
3 at 35.795 kb on - strand, within CA264_00130 at 35.860 kb on - strand, within CA264_00130 at 35.860 kb on - strand, within CA264_00130 at 35.915 kb on - strand, within CA264_00130 at 35.917 kb on - strand, within CA264_00130 at 35.917 kb on - strand, within CA264_00130 at 35.921 kb on + strand, within CA264_00130 at 36.186 kb on + strand, within CA264_00135 at 36.251 kb on + strand, within CA264_00135 at 36.483 kb on - strand at 36.490 kb on - strand at 36.543 kb on + strand at 36.569 kb on - strand at 36.632 kb on + strand at 36.640 kb on - strand at 36.672 kb on + strand at 36.673 kb on - strand at 36.673 kb on - strand at 36.693 kb on - strand at 36.694 kb on + strand at 36.694 kb on + strand at 36.695 kb on - strand at 36.721 kb on + strand, within CA264_00140 at 36.740 kb on + strand, within CA264_00140 at 36.748 kb on + strand, within CA264_00140 at 36.749 kb on - strand, within CA264_00140 at 36.749 kb on - strand, within CA264_00140 at 36.753 kb on - strand, within CA264_00140 at 36.753 kb on - strand, within CA264_00140 at 36.773 kb on - strand, within CA264_00140 at 36.791 kb on - strand, within CA264_00140 at 36.819 kb on + strand, within CA264_00140 at 36.868 kb on + strand, within CA264_00140 at 36.920 kb on - strand at 36.932 kb on + strand at 36.932 kb on + strand at 36.933 kb on - strand at 36.933 kb on - strand at 36.933 kb on - strand at 36.933 kb on - strand at 36.934 kb on + strand at 36.935 kb on - strand at 36.965 kb on + strand at 36.965 kb on + strand at 36.965 kb on + strand at 36.966 kb on - strand at 36.966 kb on - strand at 37.023 kb on - strand at 37.059 kb on + strand at 37.068 kb on + strand at 37.068 kb on + strand at 37.068 kb on + strand at 37.068 kb on + strand at 37.068 kb on + strand at 37.068 kb on + strand at 37.069 kb on + strand at 37.069 kb on - strand at 37.069 kb on - strand at 37.069 kb on - strand at 37.069 kb on - strand at 37.074 kb on - strand at 37.142 kb on - strand, within CA264_00145 at 37.199 kb on - strand, within CA264_00145 at 37.252 kb on - strand, within CA264_00145 at 37.253 kb on + strand, within CA264_00145 at 37.253 kb on + strand, within CA264_00145 at 37.254 kb on - strand, within CA264_00145 at 37.254 kb on - strand, within CA264_00145 at 37.254 kb on - strand, within CA264_00145 at 37.254 kb on - strand, within CA264_00145 at 37.254 kb on - strand, within CA264_00145 at 37.254 kb on - strand, within CA264_00145 at 37.254 kb on - strand, within CA264_00145 at 37.257 kb on + strand, within CA264_00145 at 37.273 kb on - strand, within CA264_00145 at 37.294 kb on - strand, within CA264_00145 at 37.306 kb on + strand, within CA264_00145 at 37.307 kb on - strand, within CA264_00145 at 37.405 kb on + strand, within CA264_00145 at 37.405 kb on + strand, within CA264_00145 at 37.405 kb on + strand, within CA264_00145 at 37.405 kb on + strand, within CA264_00145 at 37.471 kb on + strand, within CA264_00145 at 37.569 kb on - strand, within CA264_00145 at 37.636 kb on - strand at 37.636 kb on - strand at 37.673 kb on + strand at 37.673 kb on + strand at 37.673 kb on + strand at 37.675 kb on + strand at 37.713 kb on + strand at 37.714 kb on - strand at 37.760 kb on + strand at 37.779 kb on - strand at 37.779 kb on - strand at 37.821 kb on + strand at 37.868 kb on - strand, within CA264_00150 at 37.871 kb on + strand, within CA264_00150 at 37.884 kb on + strand, within CA264_00150
Per-strain Table
Position Strand Gene LocusTag Fraction m.b. A22 0.04 mg/ml remove 35,795 - CA264_00130 0.55 -0.7 35,860 - CA264_00130 0.68 -0.7 35,860 - CA264_00130 0.68 -0.2 35,915 - CA264_00130 0.79 -0.7 35,917 - CA264_00130 0.79 -0.4 35,917 - CA264_00130 0.79 -1.0 35,921 + CA264_00130 0.80 -0.5 36,186 + CA264_00135 0.17 +0.6 36,251 + CA264_00135 0.37 +0.5 36,483 - -0.1 36,490 - -0.0 36,543 + +0.9 36,569 - +0.0 36,632 + +2.2 36,640 - +0.0 36,672 + +1.8 36,673 - +0.9 36,673 - +0.5 36,693 - +0.1 36,694 + +1.0 36,694 + +0.1 36,695 - +0.5 36,721 + CA264_00140 0.12 +1.1 36,740 + CA264_00140 0.21 +0.2 36,748 + CA264_00140 0.24 +1.8 36,749 - CA264_00140 0.25 +0.9 36,749 - CA264_00140 0.25 +0.3 36,753 - CA264_00140 0.27 +0.2 36,753 - CA264_00140 0.27 +0.2 36,773 - CA264_00140 0.36 -2.5 36,791 - CA264_00140 0.45 +1.3 36,819 + CA264_00140 0.58 +1.1 36,868 + CA264_00140 0.81 +1.0 36,920 - -0.5 36,932 + +0.8 36,932 + +1.3 36,933 - -0.7 36,933 - +0.3 36,933 - +0.3 36,933 - +0.3 36,934 + +1.0 36,935 - +0.6 36,965 + +1.2 36,965 + +0.7 36,965 + +1.3 36,966 - +0.4 36,966 - +1.3 37,023 - +1.7 37,059 + +1.4 37,068 + +3.6 37,068 + +1.1 37,068 + +1.4 37,068 + +2.5 37,068 + +0.9 37,068 + +1.2 37,069 + +2.3 37,069 - -0.1 37,069 - +0.6 37,069 - +0.4 37,069 - +0.6 37,074 - +0.7 37,142 - CA264_00145 0.12 +0.8 37,199 - CA264_00145 0.22 +1.3 37,252 - CA264_00145 0.32 +2.2 37,253 + CA264_00145 0.32 +1.4 37,253 + CA264_00145 0.32 +0.2 37,254 - CA264_00145 0.32 +1.7 37,254 - CA264_00145 0.32 +0.7 37,254 - CA264_00145 0.32 +0.5 37,254 - CA264_00145 0.32 +0.4 37,254 - CA264_00145 0.32 +1.5 37,254 - CA264_00145 0.32 +0.6 37,254 - CA264_00145 0.32 -0.6 37,257 + CA264_00145 0.32 +0.5 37,273 - CA264_00145 0.35 +0.8 37,294 - CA264_00145 0.39 +1.0 37,306 + CA264_00145 0.41 +1.5 37,307 - CA264_00145 0.41 +0.8 37,405 + CA264_00145 0.59 +0.6 37,405 + CA264_00145 0.59 -1.0 37,405 + CA264_00145 0.59 +1.0 37,405 + CA264_00145 0.59 +1.3 37,471 + CA264_00145 0.70 +1.3 37,569 - CA264_00145 0.88 +1.6 37,636 - +1.0 37,636 - +0.6 37,673 + +1.4 37,673 + +1.4 37,673 + +1.6 37,675 + +0.4 37,713 + +0.3 37,714 - +2.0 37,760 + -3.1 37,779 - -3.8 37,779 - -3.2 37,821 + -1.5 37,868 - CA264_00150 0.15 -1.7 37,871 + CA264_00150 0.16 -4.0 37,884 + CA264_00150 0.17 -4.3
Or see this region's nucleotide sequence