Experiment: L-Alanine (C)
Only strains with sufficient reads to estimate fitness are shown,
but the strain fitness values are still rather noisy and may be biased towards zero.
Strains near the edge of a gene are not shown as being associated with that
gene (they are in grey).
Strains in the central 10-90% of a gene are color coded by the insertion's strand.
Usually, "+" means that the selectable marker is encoded on the forward strand,
i.e., transcribed rightward.
500 nt PS417_01205 and PS417_01210 are separated by 179 nucleotides PS417_01210 and PS417_01215 are separated by 56 nucleotides PS417_01215 and PS417_01220 are separated by 28 nucleotides
PS417_01205: PS417_01205 - molecular chaperone Hsp33, at 264,351 to 265,253
_01205
PS417_01210: PS417_01210 - hypothetical protein, at 265,433 to 266,974
_01210
PS417_01215: PS417_01215 - membrane protein, at 267,031 to 267,882
_01215
PS417_01220: PS417_01220 - hypothetical protein, at 267,911 to 268,267
_01220
Position (kb) 265
266
267 Strain fitness (log2 ratio) -3
-2
-1
0
1 at 265.370 kb on + strand at 265.371 kb on - strand at 265.455 kb on + strand at 265.457 kb on + strand at 265.600 kb on + strand, within PS417_01210 at 265.600 kb on + strand, within PS417_01210 at 265.601 kb on - strand, within PS417_01210 at 265.601 kb on - strand, within PS417_01210 at 265.601 kb on - strand, within PS417_01210 at 265.601 kb on - strand, within PS417_01210 at 265.601 kb on - strand, within PS417_01210 at 265.826 kb on + strand, within PS417_01210 at 265.826 kb on + strand, within PS417_01210 at 266.204 kb on + strand, within PS417_01210 at 266.204 kb on + strand, within PS417_01210 at 266.205 kb on - strand, within PS417_01210 at 266.315 kb on + strand, within PS417_01210 at 266.316 kb on - strand, within PS417_01210 at 266.487 kb on - strand, within PS417_01210 at 266.504 kb on + strand, within PS417_01210 at 266.609 kb on + strand, within PS417_01210 at 266.609 kb on + strand, within PS417_01210 at 266.851 kb on + strand at 266.852 kb on - strand at 266.972 kb on + strand at 266.972 kb on + strand at 266.973 kb on - strand at 267.032 kb on + strand at 267.156 kb on + strand, within PS417_01215 at 267.156 kb on + strand, within PS417_01215 at 267.156 kb on + strand, within PS417_01215 at 267.157 kb on - strand, within PS417_01215 at 267.410 kb on + strand, within PS417_01215 at 267.591 kb on - strand, within PS417_01215 at 267.591 kb on - strand, within PS417_01215 at 267.795 kb on - strand, within PS417_01215 at 267.897 kb on - strand at 267.897 kb on - strand at 267.897 kb on - strand at 267.897 kb on - strand at 267.966 kb on + strand, within PS417_01220 at 267.967 kb on - strand, within PS417_01220 at 267.967 kb on - strand, within PS417_01220
Per-strain Table
Position Strand Gene LocusTag Fraction L-Alanine (C) remove 265,370 + -0.9 265,371 - -1.8 265,455 + -2.1 265,457 + -1.8 265,600 + PS417_01210 0.11 -1.8 265,600 + PS417_01210 0.11 -1.5 265,601 - PS417_01210 0.11 -1.8 265,601 - PS417_01210 0.11 -1.8 265,601 - PS417_01210 0.11 -1.2 265,601 - PS417_01210 0.11 -1.2 265,601 - PS417_01210 0.11 -2.1 265,826 + PS417_01210 0.25 -1.6 265,826 + PS417_01210 0.25 -1.6 266,204 + PS417_01210 0.50 -0.5 266,204 + PS417_01210 0.50 -2.1 266,205 - PS417_01210 0.50 -1.9 266,315 + PS417_01210 0.57 -2.1 266,316 - PS417_01210 0.57 -1.9 266,487 - PS417_01210 0.68 -1.9 266,504 + PS417_01210 0.69 -1.1 266,609 + PS417_01210 0.76 -0.3 266,609 + PS417_01210 0.76 -2.5 266,851 + +0.1 266,852 - -2.9 266,972 + +0.1 266,972 + +1.0 266,973 - -1.4 267,032 + -0.1 267,156 + PS417_01215 0.15 +0.3 267,156 + PS417_01215 0.15 +0.1 267,156 + PS417_01215 0.15 -0.2 267,157 - PS417_01215 0.15 -0.1 267,410 + PS417_01215 0.44 -0.1 267,591 - PS417_01215 0.66 +0.1 267,591 - PS417_01215 0.66 -0.1 267,795 - PS417_01215 0.90 -0.3 267,897 - -0.0 267,897 - +0.2 267,897 - -0.2 267,897 - +0.8 267,966 + PS417_01220 0.15 +0.5 267,967 - PS417_01220 0.16 +0.7 267,967 - PS417_01220 0.16 -0.5
Or see this region's nucleotide sequence