Strain Fitness in Echinicola vietnamensis KMM 6221, DSM 17526 around Echvi_1711

Experiment: D-Cellobiose (C)

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	D-Cellobiose (C)
2,013,950	-		Echvi_1709	0.54	-0.4
2,013,950	-		Echvi_1709	0.54	-0.3
2,013,950	-		Echvi_1709	0.54	-0.1
2,013,950	-		Echvi_1709	0.54	+1.5
2,013,956	+		Echvi_1709	0.55	-1.1
2,013,957	-		Echvi_1709	0.55	+0.1
2,013,957	-		Echvi_1709	0.55	+0.1
2,013,958	+		Echvi_1709	0.55	+0.4
2,014,000	+		Echvi_1709	0.60	-1.3
2,014,001	-		Echvi_1709	0.60	-0.6
2,014,031	-		Echvi_1709	0.63	+2.0
2,014,119	-		Echvi_1709	0.73	+0.8
2,014,179	-		Echvi_1709	0.79	-0.9
2,014,191	-		Echvi_1709	0.81	-0.5
2,014,249	+		Echvi_1709	0.87	-0.5
2,014,349	+				-0.3
2,014,359	-				+0.3
2,014,359	-				+0.2
2,014,359	-				+0.4
2,014,387	-				+0.1
2,014,392	-				-0.6
2,014,443	-				-0.4
2,014,443	-				-0.6
2,014,465	-				-0.4
2,014,465	-				+0.3
2,014,496	+				-0.8
2,014,497	-				-2.5
2,014,499	-				+0.3
2,014,499	-				-0.3
2,014,518	+				-0.8
2,014,526	+				+0.7
2,014,527	-				-0.4
2,014,535	+				-0.0
2,014,548	+				+0.7
2,014,610	+		Echvi_1710	0.14	+0.5
2,014,694	+		Echvi_1710	0.54	-0.3
2,014,694	+		Echvi_1710	0.54	+0.2
2,014,694	+		Echvi_1710	0.54	-0.9
2,014,695	-		Echvi_1710	0.55	+1.4
2,014,695	-		Echvi_1710	0.55	+0.5
2,014,695	-		Echvi_1710	0.55	-0.5
2,014,714	-		Echvi_1710	0.64	+0.2
2,014,714	-		Echvi_1710	0.64	-0.1
2,014,724	-		Echvi_1710	0.69	+1.3
2,014,724	-		Echvi_1710	0.69	+0.1
2,014,737	+		Echvi_1710	0.75	+1.2
2,014,738	-		Echvi_1710	0.75	+0.8
2,014,738	-		Echvi_1710	0.75	+0.3
2,014,739	+		Echvi_1710	0.76	+1.5
2,014,740	-		Echvi_1710	0.76	+1.0
2,014,741	+		Echvi_1710	0.77	+0.6
2,014,741	+		Echvi_1710	0.77	+0.9
2,014,741	+		Echvi_1710	0.77	-0.6
2,014,741	+		Echvi_1710	0.77	+0.2
2,014,742	-		Echvi_1710	0.77	-1.1
2,014,742	-		Echvi_1710	0.77	-0.5
2,014,783	-				+0.6
2,014,783	-				+0.5
2,014,919	+				-0.3
2,014,930	+				-0.9
2,014,930	+				-0.1
2,014,931	-				-0.2
2,014,959	+				+0.5
2,014,969	-				-0.1
2,015,028	+		Echvi_1711	0.15	+1.0
2,015,028	+		Echvi_1711	0.15	-1.0
2,015,029	-		Echvi_1711	0.15	-0.3
2,015,033	+		Echvi_1711	0.15	+1.9
2,015,034	-		Echvi_1711	0.15	+0.2
2,015,044	+		Echvi_1711	0.16	+0.1
2,015,044	+		Echvi_1711	0.16	-2.9
2,015,044	+		Echvi_1711	0.16	-0.8
2,015,044	+		Echvi_1711	0.16	-1.3
2,015,044	+		Echvi_1711	0.16	-0.4
2,015,046	+		Echvi_1711	0.17	-0.4
2,015,046	+		Echvi_1711	0.17	+0.0
2,015,046	+		Echvi_1711	0.17	+0.1
2,015,046	+		Echvi_1711	0.17	+0.7
2,015,047	-		Echvi_1711	0.17	+1.2
2,015,052	-		Echvi_1711	0.17	-1.1
2,015,052	-		Echvi_1711	0.17	-0.5
2,015,052	-		Echvi_1711	0.17	+0.2
2,015,083	+		Echvi_1711	0.20	+0.3
2,015,084	-		Echvi_1711	0.20	+1.4
2,015,087	+		Echvi_1711	0.21	+1.1
2,015,087	+		Echvi_1711	0.21	-0.8
2,015,088	-		Echvi_1711	0.21	-0.2
2,015,088	-		Echvi_1711	0.21	+1.1
2,015,088	-		Echvi_1711	0.21	-0.6
2,015,089	+		Echvi_1711	0.21	+0.0
2,015,089	+		Echvi_1711	0.21	-0.1
2,015,090	-		Echvi_1711	0.21	-0.6
2,015,090	-		Echvi_1711	0.21	-0.4
2,015,106	-		Echvi_1711	0.22	-1.0
2,015,110	+		Echvi_1711	0.23	+0.5
2,015,110	+		Echvi_1711	0.23	-0.5
2,015,110	+		Echvi_1711	0.23	-0.5
2,015,111	-		Echvi_1711	0.23	+0.4
2,015,153	+		Echvi_1711	0.27	+0.1
2,015,206	+		Echvi_1711	0.32	-1.2
2,015,207	-		Echvi_1711	0.32	+1.5
2,015,207	-		Echvi_1711	0.32	+0.7
2,015,207	-		Echvi_1711	0.32	-0.8
2,015,211	+		Echvi_1711	0.32	-0.3
2,015,233	-		Echvi_1711	0.35	+1.4
2,015,256	+		Echvi_1711	0.37	+0.9
2,015,257	-		Echvi_1711	0.37	-0.6
2,015,259	+		Echvi_1711	0.37	-0.3
2,015,259	+		Echvi_1711	0.37	-0.2
2,015,279	+		Echvi_1711	0.39	-0.5
2,015,380	+		Echvi_1711	0.49	+1.0
2,015,380	+		Echvi_1711	0.49	+0.0
2,015,383	-		Echvi_1711	0.49	+1.0
2,015,399	+		Echvi_1711	0.51	+0.2
2,015,402	+		Echvi_1711	0.51	+0.5
2,015,411	-		Echvi_1711	0.52	+0.7
2,015,415	+		Echvi_1711	0.52	-0.5
2,015,427	+		Echvi_1711	0.53	+1.0
2,015,427	+		Echvi_1711	0.53	+0.5
2,015,427	+		Echvi_1711	0.53	+0.1
2,015,427	+		Echvi_1711	0.53	-0.3
2,015,428	-		Echvi_1711	0.53	+0.6
2,015,428	-		Echvi_1711	0.53	-0.6
2,015,428	-		Echvi_1711	0.53	-0.4
2,015,455	-		Echvi_1711	0.56	-0.2
2,015,484	-		Echvi_1711	0.59	+0.1
2,015,536	+		Echvi_1711	0.64	+1.8
2,015,536	+		Echvi_1711	0.64	-0.1
2,015,537	-		Echvi_1711	0.64	+0.8
2,015,537	-		Echvi_1711	0.64	-0.0
2,015,538	+		Echvi_1711	0.64	-0.1
2,015,538	+		Echvi_1711	0.64	+1.6
2,015,538	+		Echvi_1711	0.64	+0.4
2,015,538	+		Echvi_1711	0.64	+0.8
2,015,538	+		Echvi_1711	0.64	+0.2
2,015,538	+		Echvi_1711	0.64	+0.2
2,015,539	-		Echvi_1711	0.64	-1.0
2,015,539	-		Echvi_1711	0.64	-0.6
2,015,540	+		Echvi_1711	0.64	-1.6
2,015,540	+		Echvi_1711	0.64	-0.0
2,015,540	+		Echvi_1711	0.64	+2.0
2,015,540	+		Echvi_1711	0.64	+0.0
2,015,540	+		Echvi_1711	0.64	-0.4
2,015,540	+		Echvi_1711	0.64	+0.7
2,015,541	-		Echvi_1711	0.64	-0.0
2,015,541	-		Echvi_1711	0.64	+0.0
2,015,541	-		Echvi_1711	0.64	+1.8
2,015,541	-		Echvi_1711	0.64	-0.8
2,015,541	-		Echvi_1711	0.64	+0.5
2,015,541	-		Echvi_1711	0.64	-0.9
2,015,541	-		Echvi_1711	0.64	+0.0
2,015,541	-		Echvi_1711	0.64	+0.6
2,015,543	-		Echvi_1711	0.64	+0.4
2,015,579	+		Echvi_1711	0.68	-0.1
2,015,622	+		Echvi_1711	0.72	-0.0
2,015,622	+		Echvi_1711	0.72	+0.2
2,015,622	+		Echvi_1711	0.72	-1.2
2,015,623	-		Echvi_1711	0.72	-0.1
2,015,648	+		Echvi_1711	0.74	+0.0
2,015,649	-		Echvi_1711	0.75	+0.8
2,015,658	+		Echvi_1711	0.75	+0.7
2,015,658	+		Echvi_1711	0.75	-0.5
2,015,659	-		Echvi_1711	0.76	+0.4
2,015,665	+		Echvi_1711	0.76	+0.5
2,015,665	+		Echvi_1711	0.76	+0.3
2,015,668	+		Echvi_1711	0.76	-1.0
2,015,669	-		Echvi_1711	0.76	+0.2
2,015,669	-		Echvi_1711	0.76	+0.0
2,015,670	+		Echvi_1711	0.77	-0.9
2,015,670	+		Echvi_1711	0.77	+0.6
2,015,671	-		Echvi_1711	0.77	+0.4
2,015,710	+		Echvi_1711	0.80	+2.6
2,015,710	+		Echvi_1711	0.80	+0.2
2,015,711	-		Echvi_1711	0.80	+0.6
2,015,738	+		Echvi_1711	0.83	-0.3
2,015,738	+		Echvi_1711	0.83	+0.7
2,015,739	-		Echvi_1711	0.83	-0.5
2,015,786	+		Echvi_1711	0.88	+0.8
2,015,889	-				+0.2
2,015,889	-				+0.2
2,015,892	-				+0.6
2,015,894	+				+0.2
2,015,895	-				-0.1
2,015,911	+				-1.3
2,015,911	+				+0.2
2,015,926	-				+1.2
2,015,939	+				-0.5
2,015,940	-				-0.4
2,015,940	-				+0.5
2,015,940	-				-0.8
2,015,940	-				+0.5
2,015,961	-				-0.0
2,016,040	-				-0.4
2,016,216	+		Echvi_1712	0.15	-0.1
2,016,242	-		Echvi_1712	0.17	+0.3
2,016,260	-		Echvi_1712	0.19	+0.0
2,016,260	-		Echvi_1712	0.19	-0.0
2,016,318	+		Echvi_1712	0.24	+0.4
2,016,318	+		Echvi_1712	0.24	-0.3
2,016,318	+		Echvi_1712	0.24	+0.6
2,016,319	-		Echvi_1712	0.24	-1.5
2,016,319	-		Echvi_1712	0.24	+0.2
2,016,319	-		Echvi_1712	0.24	+0.5
2,016,417	+		Echvi_1712	0.34	+0.1
2,016,417	+		Echvi_1712	0.34	-0.3
2,016,419	+		Echvi_1712	0.34	+0.3
2,016,420	-		Echvi_1712	0.34	+2.2
2,016,741	+		Echvi_1712	0.64	+0.7
2,016,742	-		Echvi_1712	0.64	+0.4