Experiment: L-Glutamine (C)
Only strains with sufficient reads to estimate fitness are shown,
but the strain fitness values are still rather noisy and may be biased towards zero.
Strains near the edge of a gene are not shown as being associated with that
gene (they are in grey).
Strains in the central 10-90% of a gene are color coded by the insertion's strand.
Usually, "+" means that the selectable marker is encoded on the forward strand,
i.e., transcribed rightward.
500 nt PS417_27020 and PS417_27025 are separated by 120 nucleotides PS417_27025 and PS417_27030 are separated by 243 nucleotides PS417_27030 and PS417_27035 are separated by 21 nucleotides
PS417_27020: PS417_27020 - DNA-binding protein, at 5,834,798 to 5,835,712
_27020
PS417_27025: PS417_27025 - DNA-binding protein, at 5,835,833 to 5,836,759
_27025
PS417_27030: PS417_27030 - hypothetical protein, at 5,837,003 to 5,837,668
_27030
PS417_27035: PS417_27035 - FAD-linked oxidase, at 5,837,690 to 5,839,084
_27035
Position (kb) 5835
5836
5837 Strain fitness (log2 ratio) -2
-1
0
1 at 5835.024 kb on + strand, within PS417_27020 at 5835.096 kb on + strand, within PS417_27020 at 5835.138 kb on + strand, within PS417_27020 at 5835.139 kb on - strand, within PS417_27020 at 5835.139 kb on - strand, within PS417_27020 at 5835.195 kb on + strand, within PS417_27020 at 5835.336 kb on + strand, within PS417_27020 at 5835.336 kb on + strand, within PS417_27020 at 5835.337 kb on - strand, within PS417_27020 at 5835.395 kb on - strand, within PS417_27020 at 5835.448 kb on + strand, within PS417_27020 at 5835.483 kb on + strand, within PS417_27020 at 5835.483 kb on + strand, within PS417_27020 at 5835.483 kb on + strand, within PS417_27020 at 5835.484 kb on - strand, within PS417_27020 at 5835.522 kb on - strand, within PS417_27020 at 5835.746 kb on + strand at 5835.747 kb on - strand at 5835.766 kb on - strand at 5835.766 kb on - strand at 5835.772 kb on - strand at 5835.772 kb on - strand at 5835.823 kb on - strand at 5835.834 kb on + strand at 5835.882 kb on + strand at 5835.882 kb on + strand at 5835.883 kb on - strand at 5835.883 kb on - strand at 5835.883 kb on - strand at 5836.150 kb on + strand, within PS417_27025 at 5836.257 kb on + strand, within PS417_27025 at 5836.257 kb on + strand, within PS417_27025 at 5836.257 kb on + strand, within PS417_27025 at 5836.258 kb on - strand, within PS417_27025 at 5836.258 kb on - strand, within PS417_27025 at 5836.258 kb on - strand, within PS417_27025 at 5836.494 kb on + strand, within PS417_27025 at 5836.494 kb on + strand, within PS417_27025 at 5836.495 kb on - strand, within PS417_27025 at 5836.561 kb on - strand, within PS417_27025 at 5836.561 kb on - strand, within PS417_27025 at 5836.575 kb on - strand, within PS417_27025 at 5836.787 kb on + strand at 5836.788 kb on - strand at 5836.890 kb on - strand at 5837.594 kb on - strand, within PS417_27030 at 5837.649 kb on + strand at 5837.649 kb on + strand at 5837.649 kb on + strand at 5837.649 kb on + strand at 5837.649 kb on + strand at 5837.649 kb on + strand at 5837.649 kb on + strand at 5837.650 kb on - strand at 5837.650 kb on - strand at 5837.662 kb on - strand
Per-strain Table
Position Strand Gene LocusTag Fraction L-Glutamine (C) remove 5,835,024 + PS417_27020 0.25 -0.2 5,835,096 + PS417_27020 0.33 +1.3 5,835,138 + PS417_27020 0.37 +0.3 5,835,139 - PS417_27020 0.37 +0.1 5,835,139 - PS417_27020 0.37 -0.7 5,835,195 + PS417_27020 0.43 +0.1 5,835,336 + PS417_27020 0.59 -0.1 5,835,336 + PS417_27020 0.59 -0.1 5,835,337 - PS417_27020 0.59 -1.0 5,835,395 - PS417_27020 0.65 +0.2 5,835,448 + PS417_27020 0.71 -0.6 5,835,483 + PS417_27020 0.75 -1.1 5,835,483 + PS417_27020 0.75 -0.2 5,835,483 + PS417_27020 0.75 +0.2 5,835,484 - PS417_27020 0.75 +0.9 5,835,522 - PS417_27020 0.79 +0.7 5,835,746 + +0.1 5,835,747 - -0.2 5,835,766 - +1.3 5,835,766 - +0.1 5,835,772 - -0.3 5,835,772 - +1.2 5,835,823 - -0.1 5,835,834 + -0.1 5,835,882 + +0.3 5,835,882 + -0.1 5,835,883 - +0.5 5,835,883 - +0.1 5,835,883 - -1.2 5,836,150 + PS417_27025 0.34 -0.8 5,836,257 + PS417_27025 0.46 -0.2 5,836,257 + PS417_27025 0.46 -1.3 5,836,257 + PS417_27025 0.46 -0.0 5,836,258 - PS417_27025 0.46 -0.3 5,836,258 - PS417_27025 0.46 +0.3 5,836,258 - PS417_27025 0.46 -0.4 5,836,494 + PS417_27025 0.71 +0.3 5,836,494 + PS417_27025 0.71 -0.5 5,836,495 - PS417_27025 0.71 -0.2 5,836,561 - PS417_27025 0.79 -0.2 5,836,561 - PS417_27025 0.79 +0.3 5,836,575 - PS417_27025 0.80 -0.1 5,836,787 + -0.4 5,836,788 - -0.2 5,836,890 - -0.1 5,837,594 - PS417_27030 0.89 +0.2 5,837,649 + -2.7 5,837,649 + -0.5 5,837,649 + -0.1 5,837,649 + -0.0 5,837,649 + +0.1 5,837,649 + +0.8 5,837,649 + -0.1 5,837,650 - -0.0 5,837,650 - -0.7 5,837,662 - -0.8
Or see this region's nucleotide sequence