Experiment: L-Glutamine (C)
Only strains with sufficient reads to estimate fitness are shown,
but the strain fitness values are still rather noisy and may be biased towards zero.
Strains near the edge of a gene are not shown as being associated with that
gene (they are in grey).
Strains in the central 10-90% of a gene are color coded by the insertion's strand.
Usually, "+" means that the selectable marker is encoded on the forward strand,
i.e., transcribed rightward.
500 nt PS417_18455 and PS417_18460 are separated by 42 nucleotides PS417_18460 and PS417_18465 overlap by 4 nucleotides PS417_18465 and PS417_18470 are separated by 126 nucleotides PS417_18470 and PS417_18475 are separated by 15 nucleotides
PS417_18455: PS417_18455 - hypothetical protein, at 4,013,919 to 4,014,164
_18455
PS417_18460: PS417_18460 - transcriptional regulator, at 4,014,207 to 4,014,878
_18460
PS417_18465: PS417_18465 - histidine kinase, at 4,014,875 to 4,016,275
_18465
PS417_18470: PS417_18470 - hypothetical protein, at 4,016,402 to 4,016,626
_18470
PS417_18475: PS417_18475 - Pyrrolidone-carboxylate peptidase, at 4,016,642 to 4,017,283
_18475
Position (kb) 4014
4015
4016
4017 Strain fitness (log2 ratio) -1
0
1 at 4013.931 kb on - strand at 4014.054 kb on + strand, within PS417_18455 at 4014.055 kb on - strand, within PS417_18455 at 4014.090 kb on + strand, within PS417_18455 at 4014.220 kb on + strand at 4014.249 kb on + strand at 4014.279 kb on + strand, within PS417_18460 at 4014.465 kb on - strand, within PS417_18460 at 4014.660 kb on - strand, within PS417_18460 at 4014.894 kb on - strand at 4015.022 kb on + strand, within PS417_18465 at 4015.374 kb on - strand, within PS417_18465 at 4015.389 kb on - strand, within PS417_18465 at 4015.389 kb on - strand at 4015.389 kb on - strand, within PS417_18465 at 4015.716 kb on - strand, within PS417_18465 at 4015.991 kb on + strand, within PS417_18465 at 4015.991 kb on + strand, within PS417_18465 at 4016.094 kb on + strand, within PS417_18465 at 4016.095 kb on - strand, within PS417_18465 at 4016.095 kb on - strand, within PS417_18465 at 4016.295 kb on + strand at 4016.317 kb on + strand at 4016.409 kb on + strand at 4016.409 kb on + strand at 4016.416 kb on - strand at 4016.416 kb on - strand at 4016.549 kb on + strand, within PS417_18470 at 4016.549 kb on + strand, within PS417_18470 at 4016.550 kb on - strand, within PS417_18470 at 4016.581 kb on - strand, within PS417_18470 at 4016.683 kb on + strand at 4016.683 kb on + strand at 4016.684 kb on - strand at 4016.728 kb on + strand, within PS417_18475 at 4016.729 kb on - strand, within PS417_18475 at 4016.729 kb on - strand, within PS417_18475 at 4016.729 kb on - strand, within PS417_18475 at 4017.272 kb on + strand
Per-strain Table
Position Strand Gene LocusTag Fraction L-Glutamine (C) remove 4,013,931 - -0.9 4,014,054 + PS417_18455 0.55 +0.5 4,014,055 - PS417_18455 0.55 +0.5 4,014,090 + PS417_18455 0.70 -0.0 4,014,220 + -0.1 4,014,249 + +0.3 4,014,279 + PS417_18460 0.11 -1.1 4,014,465 - PS417_18460 0.38 -0.0 4,014,660 - PS417_18460 0.67 -0.1 4,014,894 - -0.1 4,015,022 + PS417_18465 0.10 +0.2 4,015,374 - PS417_18465 0.36 +0.4 4,015,389 - PS417_18465 0.37 +0.1 4,015,389 - +0.9 4,015,389 - PS417_18465 0.37 +0.5 4,015,716 - PS417_18465 0.60 -0.4 4,015,991 + PS417_18465 0.80 +0.5 4,015,991 + PS417_18465 0.80 +0.9 4,016,094 + PS417_18465 0.87 +0.5 4,016,095 - PS417_18465 0.87 +0.8 4,016,095 - PS417_18465 0.87 +0.5 4,016,295 + -0.4 4,016,317 + -0.2 4,016,409 + -0.4 4,016,409 + +0.3 4,016,416 - +0.0 4,016,416 - +0.3 4,016,549 + PS417_18470 0.65 +0.1 4,016,549 + PS417_18470 0.65 -0.4 4,016,550 - PS417_18470 0.66 -0.2 4,016,581 - PS417_18470 0.80 +0.5 4,016,683 + -1.5 4,016,683 + +0.1 4,016,684 - +0.7 4,016,728 + PS417_18475 0.13 -0.6 4,016,729 - PS417_18475 0.14 +0.3 4,016,729 - PS417_18475 0.14 -0.2 4,016,729 - PS417_18475 0.14 +0.0 4,017,272 + -0.5
Or see this region's nucleotide sequence