Experiment: L-Glutamine (C)
Only strains with sufficient reads to estimate fitness are shown,
but the strain fitness values are still rather noisy and may be biased towards zero.
Strains near the edge of a gene are not shown as being associated with that
gene (they are in grey).
Strains in the central 10-90% of a gene are color coded by the insertion's strand.
Usually, "+" means that the selectable marker is encoded on the forward strand,
i.e., transcribed rightward.
500 nt PS417_06070 and PS417_06075 are separated by 160 nucleotides PS417_06075 and PS417_06080 overlap by 1 nucleotides PS417_06080 and PS417_06085 are separated by 27 nucleotides PS417_06085 and PS417_06090 are separated by 27 nucleotides
PS417_06070: PS417_06070 - peptidase M22, at 1,347,286 to 1,347,972
_06070
PS417_06075: PS417_06075 - hypothetical protein, at 1,348,133 to 1,348,423
_06075
PS417_06080: PS417_06080 - hypothetical protein, at 1,348,423 to 1,349,283
_06080
PS417_06085: PS417_06085 - 2-methylisocitrate lyase, at 1,349,311 to 1,350,138
_06085
PS417_06090: PS417_06090 - extensin, at 1,350,166 to 1,350,840
_06090
Position (kb) 1348
1349
1350 Strain fitness (log2 ratio) -1
0
1
2
3 at 1348.050 kb on + strand at 1348.138 kb on + strand at 1348.204 kb on - strand, within PS417_06075 at 1348.358 kb on + strand, within PS417_06075 at 1348.435 kb on + strand at 1348.436 kb on - strand at 1348.438 kb on + strand at 1348.480 kb on + strand at 1348.567 kb on + strand, within PS417_06080 at 1348.567 kb on + strand, within PS417_06080 at 1348.567 kb on + strand, within PS417_06080 at 1348.568 kb on - strand, within PS417_06080 at 1348.568 kb on - strand, within PS417_06080 at 1348.568 kb on - strand, within PS417_06080 at 1348.770 kb on + strand, within PS417_06080 at 1348.770 kb on + strand, within PS417_06080 at 1348.771 kb on - strand, within PS417_06080 at 1348.839 kb on - strand, within PS417_06080 at 1348.918 kb on - strand, within PS417_06080 at 1348.918 kb on - strand, within PS417_06080 at 1349.141 kb on + strand, within PS417_06080 at 1349.141 kb on + strand, within PS417_06080 at 1349.142 kb on - strand, within PS417_06080 at 1349.142 kb on - strand, within PS417_06080 at 1349.142 kb on - strand, within PS417_06080 at 1349.142 kb on - strand, within PS417_06080 at 1349.142 kb on - strand, within PS417_06080 at 1349.690 kb on - strand, within PS417_06085 at 1349.863 kb on + strand, within PS417_06085 at 1349.863 kb on + strand, within PS417_06085 at 1349.936 kb on + strand, within PS417_06085 at 1349.937 kb on - strand, within PS417_06085 at 1349.937 kb on - strand, within PS417_06085 at 1350.064 kb on + strand at 1350.064 kb on + strand at 1350.065 kb on - strand at 1350.065 kb on - strand at 1350.065 kb on - strand
Per-strain Table
Position Strand Gene LocusTag Fraction L-Glutamine (C) remove 1,348,050 + +0.7 1,348,138 + +0.0 1,348,204 - PS417_06075 0.24 +0.7 1,348,358 + PS417_06075 0.77 +0.1 1,348,435 + -0.5 1,348,436 - +1.4 1,348,438 + -0.0 1,348,480 + +0.4 1,348,567 + PS417_06080 0.17 -0.1 1,348,567 + PS417_06080 0.17 +0.1 1,348,567 + PS417_06080 0.17 -0.3 1,348,568 - PS417_06080 0.17 -0.0 1,348,568 - PS417_06080 0.17 +0.6 1,348,568 - PS417_06080 0.17 +0.1 1,348,770 + PS417_06080 0.40 -0.3 1,348,770 + PS417_06080 0.40 +0.1 1,348,771 - PS417_06080 0.40 -0.5 1,348,839 - PS417_06080 0.48 +1.0 1,348,918 - PS417_06080 0.57 +0.0 1,348,918 - PS417_06080 0.57 +0.9 1,349,141 + PS417_06080 0.83 +3.1 1,349,141 + PS417_06080 0.83 +0.8 1,349,142 - PS417_06080 0.84 -0.2 1,349,142 - PS417_06080 0.84 +0.3 1,349,142 - PS417_06080 0.84 +0.8 1,349,142 - PS417_06080 0.84 +0.9 1,349,142 - PS417_06080 0.84 +0.2 1,349,690 - PS417_06085 0.46 -0.7 1,349,863 + PS417_06085 0.67 +0.1 1,349,863 + PS417_06085 0.67 +1.2 1,349,936 + PS417_06085 0.75 +0.5 1,349,937 - PS417_06085 0.76 -0.7 1,349,937 - PS417_06085 0.76 +0.1 1,350,064 + +0.3 1,350,064 + +0.4 1,350,065 - -0.7 1,350,065 - -0.6 1,350,065 - +0.2
Or see this region's nucleotide sequence