Strain Fitness in Echinicola vietnamensis KMM 6221, DSM 17526 around Echvi_1924

Experiment: a-Cyclodextrin (C)

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	a-Cyclodextrin (C)
2,264,410	+		Echvi_1923	0.37	-0.8
2,264,410	+		Echvi_1923	0.37	-1.4
2,264,416	+		Echvi_1923	0.37	+0.4
2,264,417	-		Echvi_1923	0.37	+0.1
2,264,510	-		Echvi_1923	0.43	-0.5
2,264,512	+		Echvi_1923	0.44	+0.1
2,264,521	-		Echvi_1923	0.44	-0.5
2,264,691	+		Echvi_1923	0.56	+0.2
2,264,692	-		Echvi_1923	0.56	-0.4
2,264,751	+		Echvi_1923	0.60	-2.7
2,264,751	+		Echvi_1923	0.60	-0.8
2,264,751	+		Echvi_1923	0.60	+0.4
2,264,751	+		Echvi_1923	0.60	+0.8
2,264,752	-		Echvi_1923	0.60	-0.0
2,264,752	-		Echvi_1923	0.60	-0.2
2,264,752	-		Echvi_1923	0.60	-1.4
2,264,752	-		Echvi_1923	0.60	+1.3
2,264,752	-		Echvi_1923	0.60	+2.0
2,264,764	-		Echvi_1923	0.61	-1.3
2,264,767	+		Echvi_1923	0.61	-1.0
2,264,767	+		Echvi_1923	0.61	-0.1
2,264,768	-		Echvi_1923	0.61	-0.2
2,264,768	-		Echvi_1923	0.61	+0.6
2,264,768	-		Echvi_1923	0.61	+0.7
2,264,792	-		Echvi_1923	0.63	+0.4
2,264,795	+		Echvi_1923	0.63	-0.5
2,264,795	+		Echvi_1923	0.63	+0.4
2,264,798	+		Echvi_1923	0.63	-0.1
2,264,799	-		Echvi_1923	0.64	-1.0
2,264,799	-		Echvi_1923	0.64	-0.7
2,264,833	+		Echvi_1923	0.66	+0.5
2,264,833	+		Echvi_1923	0.66	+0.6
2,264,833	+		Echvi_1923	0.66	+1.4
2,264,833	+		Echvi_1923	0.66	-0.2
2,264,833	+		Echvi_1923	0.66	+0.2
2,264,833	+		Echvi_1923	0.66	+0.5
2,264,833	+		Echvi_1923	0.66	+1.1
2,264,834	-		Echvi_1923	0.66	+0.2
2,264,834	-		Echvi_1923	0.66	+1.2
2,264,941	+		Echvi_1923	0.73	+0.2
2,264,941	+		Echvi_1923	0.73	+0.4
2,264,941	+		Echvi_1923	0.73	-1.1
2,265,018	-		Echvi_1923	0.79	-1.3
2,265,032	+		Echvi_1923	0.80	-0.4
2,265,032	+		Echvi_1923	0.80	-2.4
2,265,032	+		Echvi_1923	0.80	-1.0
2,265,035	-		Echvi_1923	0.80	-0.3
2,265,037	+		Echvi_1923	0.80	-1.5
2,265,037	+		Echvi_1923	0.80	-0.8
2,265,038	-		Echvi_1923	0.80	-0.8
2,265,038	-		Echvi_1923	0.80	-0.2
2,265,038	-		Echvi_1923	0.80	-0.5
2,265,038	-		Echvi_1923	0.80	-0.4
2,265,041	+		Echvi_1923	0.80	-0.3
2,265,307	+				-0.2
2,265,308	-				+0.6
2,265,308	-				+0.1
2,265,308	-				+0.7
2,265,310	-				-1.1
2,265,310	-				+0.5
2,265,310	-				+1.8
2,265,313	+				+0.1
2,265,314	-				+0.6
2,265,356	+				+1.3
2,265,365	+				+0.1
2,265,365	+				-0.9
2,265,372	+				-0.2
2,265,456	+				-1.2
2,265,457	-				-0.0
2,265,457	-				+1.1
2,265,497	+				+0.4
2,265,627	+				-0.3
2,265,643	-				-0.8
2,265,792	+		Echvi_1924	0.13	-0.4
2,265,819	-		Echvi_1924	0.14	-1.5
2,265,856	+		Echvi_1924	0.15	-0.4
2,265,900	+		Echvi_1924	0.16	-0.4
2,265,900	+		Echvi_1924	0.16	-0.2
2,265,901	-		Echvi_1924	0.16	+0.9
2,266,173	-		Echvi_1924	0.24	+0.1
2,266,218	+		Echvi_1924	0.25	-0.7
2,266,262	-		Echvi_1924	0.26	+1.6
2,266,262	-		Echvi_1924	0.26	+0.4
2,266,372	-		Echvi_1924	0.29	-0.3
2,266,382	-		Echvi_1924	0.30	+0.0
2,266,422	+		Echvi_1924	0.31	-0.4
2,266,423	-		Echvi_1924	0.31	-0.6
2,266,566	+		Echvi_1924	0.35	+0.7
2,266,566	+		Echvi_1924	0.35	-1.0
2,266,589	+		Echvi_1924	0.36	-0.2
2,266,590	-		Echvi_1924	0.36	-1.5
2,266,628	+		Echvi_1924	0.37	-1.3
2,266,628	+		Echvi_1924	0.37	-1.4
2,266,628	+		Echvi_1924	0.37	-0.5
2,266,629	-		Echvi_1924	0.37	-1.5
2,266,629	-		Echvi_1924	0.37	+0.2
2,266,662	+		Echvi_1924	0.38	+0.2
2,266,663	-		Echvi_1924	0.38	+0.1
2,266,673	+		Echvi_1924	0.38	-1.0
2,266,673	+		Echvi_1924	0.38	-0.8
2,266,681	+		Echvi_1924	0.38	+1.7
2,266,682	-		Echvi_1924	0.38	-0.3
2,266,729	+		Echvi_1924	0.40	+0.8
2,266,845	+		Echvi_1924	0.43	+0.1
2,266,845	+				+1.8
2,266,845	+		Echvi_1924	0.43	-0.0
2,266,884	-		Echvi_1924	0.44	-1.5
2,266,930	-		Echvi_1924	0.45	-0.5
2,266,930	-		Echvi_1924	0.45	+0.2
2,266,930	-		Echvi_1924	0.45	-1.6
2,266,959	+		Echvi_1924	0.46	+0.6
2,266,959	+		Echvi_1924	0.46	-0.5
2,266,959	+		Echvi_1924	0.46	-2.3
2,266,960	-		Echvi_1924	0.46	-0.2
2,266,960	-		Echvi_1924	0.46	+0.7
2,266,960	-		Echvi_1924	0.46	+0.8
2,266,960	-		Echvi_1924	0.46	-1.4
2,266,960	-		Echvi_1924	0.46	+0.1
2,266,997	-		Echvi_1924	0.47	-1.5
2,267,068	-		Echvi_1924	0.49	-0.7
2,267,068	-		Echvi_1924	0.49	+1.2
2,267,069	+		Echvi_1924	0.49	+0.2
2,267,070	-		Echvi_1924	0.49	+1.2
2,267,070	-		Echvi_1924	0.49	-0.2
2,267,080	-		Echvi_1924	0.50	-0.1
2,267,103	+		Echvi_1924	0.50	-0.8
2,267,104	-		Echvi_1924	0.50	-0.8
2,267,215	+		Echvi_1924	0.53	-0.6
2,267,215	+		Echvi_1924	0.53	-0.1
2,267,216	-		Echvi_1924	0.53	+2.4
2,267,217	+		Echvi_1924	0.53	+0.3
2,267,217	+		Echvi_1924	0.53	+0.4
2,267,217	+		Echvi_1924	0.53	-0.7
2,267,218	-		Echvi_1924	0.53	+1.0
2,267,218	-		Echvi_1924	0.53	-0.6
2,267,291	+		Echvi_1924	0.56	+1.8
2,267,418	-		Echvi_1924	0.59	+1.1
2,267,472	+		Echvi_1924	0.61	+0.4
2,267,472	+		Echvi_1924	0.61	+0.3
2,267,473	-		Echvi_1924	0.61	+1.6
2,267,473	-		Echvi_1924	0.61	-0.5
2,267,510	+		Echvi_1924	0.62	-0.1
2,267,510	+		Echvi_1924	0.62	-0.2
2,267,516	-		Echvi_1924	0.62	+1.6
2,267,530	-		Echvi_1924	0.62	-1.0
2,267,530	-		Echvi_1924	0.62	+1.8
2,267,530	-		Echvi_1924	0.62	+0.3
2,267,532	+		Echvi_1924	0.62	+0.4
2,267,532	+		Echvi_1924	0.62	-0.4
2,267,533	-		Echvi_1924	0.62	-0.6
2,267,533	-		Echvi_1924	0.62	+0.5
2,267,536	-		Echvi_1924	0.63	+0.9
2,267,536	-		Echvi_1924	0.63	+0.6
2,267,551	+		Echvi_1924	0.63	-0.8
2,267,584	+		Echvi_1924	0.64	-0.0
2,267,585	-		Echvi_1924	0.64	-2.2
2,267,585	-		Echvi_1924	0.64	+0.5
2,267,607	+		Echvi_1924	0.65	-0.9
2,267,608	-		Echvi_1924	0.65	+0.2
2,267,613	+		Echvi_1924	0.65	+2.1
2,267,613	+		Echvi_1924	0.65	-1.8
2,267,616	+		Echvi_1924	0.65	+0.5
2,267,616	+		Echvi_1924	0.65	+0.0
2,267,617	-		Echvi_1924	0.65	-0.8
2,267,630	-		Echvi_1924	0.65	+0.4
2,267,670	-		Echvi_1924	0.66	-0.4
2,267,670	-		Echvi_1924	0.66	-1.0
2,267,674	-		Echvi_1924	0.66	+0.6
2,267,701	-		Echvi_1924	0.67	+0.7
2,267,761	+		Echvi_1924	0.69	+0.0
2,267,769	-		Echvi_1924	0.69	-0.4
2,267,818	+		Echvi_1924	0.71	+0.6
2,267,861	+		Echvi_1924	0.72	+0.6
2,267,917	-		Echvi_1924	0.73	-0.5
2,267,956	-		Echvi_1924	0.75	+0.6
2,268,008	+		Echvi_1924	0.76	-0.6
2,268,008	+		Echvi_1924	0.76	+0.6
2,268,009	-		Echvi_1924	0.76	-0.6
2,268,009	-		Echvi_1924	0.76	+0.3
2,268,273	-		Echvi_1924	0.84	-0.1
2,268,308	+		Echvi_1924	0.85	+0.6
2,268,308	+		Echvi_1924	0.85	-0.5
2,268,458	-		Echvi_1924	0.89	+1.6
2,268,458	-		Echvi_1924	0.89	+0.1
2,268,509	+				+1.0
2,268,510	-				+1.4
2,268,510	-				-0.9
2,268,595	+				+0.4
2,268,651	+				+0.1
2,268,652	-				+0.9
2,268,652	-				+0.6
2,268,654	+				+0.2
2,268,683	+				+1.8
2,268,684	-				+0.6
2,268,795	-				-0.3
2,268,795	-				+0.4
2,268,851	-				+0.3
2,268,874	+				+0.2
2,268,874	+				-0.6
2,268,874	+				+0.8
2,268,875	-				+0.1
2,268,901	+				+0.5
2,268,902	-				-1.2
2,268,908	+				+1.8
2,268,929	-				+0.1
2,268,932	+				-0.6
2,268,933	-				-0.1
2,268,959	+				-1.9
2,268,960	-				+0.3
2,269,257	+		Echvi_1925	0.40	+0.3
2,269,301	+		Echvi_1925	0.45	-0.8
2,269,302	-		Echvi_1925	0.45	+0.4
2,269,430	+		Echvi_1925	0.58	+0.2
2,269,430	+		Echvi_1925	0.58	-1.1
2,269,431	-		Echvi_1925	0.59	-1.3
2,269,431	-		Echvi_1925	0.59	-1.9
2,269,631	+		Echvi_1925	0.80	-1.1
2,269,729	+				+0.2
2,269,729	+				-0.9
2,269,730	-				+0.3
2,269,749	-				-1.4
2,269,837	-				+0.4