Strain Fitness in Echinicola vietnamensis KMM 6221, DSM 17526 around Echvi_1680

Experiment: a-Cyclodextrin (C)

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	a-Cyclodextrin (C)
1,965,746	+				-1.3
1,965,753	+				-0.9
1,965,753	+				+0.9
1,965,754	-				+0.4
1,965,775	+				-0.5
1,965,906	-		Echvi_1679	0.12	-1.5
1,965,937	-		Echvi_1679	0.16	-0.3
1,965,937	-		Echvi_1679	0.16	+0.9
1,966,028	-		Echvi_1679	0.28	+0.9
1,966,111	+		Echvi_1679	0.39	+0.1
1,966,211	-		Echvi_1679	0.52	+0.8
1,966,276	+		Echvi_1679	0.61	+1.1
1,966,276	+		Echvi_1679	0.61	-0.5
1,966,277	-		Echvi_1679	0.61	+0.9
1,966,340	+		Echvi_1679	0.69	-0.1
1,966,340	+		Echvi_1679	0.69	-0.9
1,966,341	-		Echvi_1679	0.70	-0.7
1,966,346	-		Echvi_1679	0.70	-0.5
1,966,346	-		Echvi_1679	0.70	+0.1
1,966,346	-		Echvi_1679	0.70	+1.5
1,966,346	-		Echvi_1679	0.70	-1.0
1,966,474	+		Echvi_1679	0.87	-0.4
1,966,513	+				+1.4
1,966,578	+				-0.8
1,966,578	+				-1.0
1,966,578	+				+0.3
1,966,578	+				-0.1
1,966,584	+				-0.3
1,966,584	+				-1.8
1,966,602	-				-2.2
1,966,602	-				+0.9
1,966,628	+				+0.4
1,966,629	-				+1.4
1,966,636	+				+0.7
1,966,636	+				+0.9
1,966,636	+				-0.7
1,966,636	+				-0.7
1,966,637	-				-0.6
1,966,712	+				+0.9
1,966,712	+				-0.3
1,966,714	-				+0.5
1,966,727	+				+0.1
1,966,749	-				+0.1
1,966,783	+				+0.1
1,966,887	+				+0.1
1,966,888	-				+0.1
1,966,916	+		Echvi_1680	0.12	-0.7
1,966,916	+		Echvi_1680	0.12	-0.3
1,966,917	-		Echvi_1680	0.12	+0.2
1,966,917	-		Echvi_1680	0.12	+0.3
1,966,917	-		Echvi_1680	0.12	-0.8
1,966,955	-		Echvi_1680	0.14	-0.2
1,966,960	-		Echvi_1680	0.14	+0.1
1,966,960	-		Echvi_1680	0.14	-0.2
1,966,967	+				+2.9
1,966,968	-		Echvi_1680	0.15	+1.0
1,966,998	+		Echvi_1680	0.17	+0.4
1,966,998	+		Echvi_1680	0.17	+0.6
1,967,004	+		Echvi_1680	0.17	+0.6
1,967,120	-		Echvi_1680	0.24	-0.4
1,967,122	-		Echvi_1680	0.25	+1.5
1,967,122	-		Echvi_1680	0.25	-0.1
1,967,292	-		Echvi_1680	0.35	-0.3
1,967,292	-		Echvi_1680	0.35	+1.1
1,967,347	+		Echvi_1680	0.39	+1.0
1,967,348	-		Echvi_1680	0.39	+0.4
1,967,350	-		Echvi_1680	0.39	-0.5
1,967,350	-		Echvi_1680	0.39	+0.6
1,967,350	-		Echvi_1680	0.39	+1.6
1,967,431	+		Echvi_1680	0.44	+0.5
1,967,577	-		Echvi_1680	0.53	+0.4
1,967,610	+		Echvi_1680	0.55	+1.8
1,967,610	+		Echvi_1680	0.55	+0.4
1,967,612	+		Echvi_1680	0.55	+0.3
1,967,612	+		Echvi_1680	0.55	+0.4
1,967,612	+		Echvi_1680	0.55	-0.4
1,967,612	+		Echvi_1680	0.55	-2.1
1,967,612	+		Echvi_1680	0.55	+0.4
1,967,612	+		Echvi_1680	0.55	+0.1
1,967,612	+		Echvi_1680	0.55	+0.3
1,967,612	+		Echvi_1680	0.55	-2.0
1,967,612	+		Echvi_1680	0.55	+1.3
1,967,612	+		Echvi_1680	0.55	+0.2
1,967,612	+		Echvi_1680	0.55	-0.9
1,967,612	+		Echvi_1680	0.55	+0.4
1,967,613	-		Echvi_1680	0.56	-0.1
1,967,613	-		Echvi_1680	0.56	+0.1
1,967,613	-		Echvi_1680	0.56	-0.1
1,967,613	-		Echvi_1680	0.56	+0.4
1,967,613	-		Echvi_1680	0.56	+0.9
1,967,613	-		Echvi_1680	0.56	-1.1
1,967,613	-		Echvi_1680	0.56	+0.9
1,967,613	-		Echvi_1680	0.56	+1.4
1,967,617	+		Echvi_1680	0.56	+1.6
1,967,617	+		Echvi_1680	0.56	+1.3
1,967,617	+		Echvi_1680	0.56	-1.0
1,967,617	+		Echvi_1680	0.56	+0.6
1,967,617	+		Echvi_1680	0.56	-1.0
1,967,617	+		Echvi_1680	0.56	+1.9
1,967,618	-		Echvi_1680	0.56	-1.0
1,967,618	-		Echvi_1680	0.56	-0.6
1,967,618	-		Echvi_1680	0.56	-0.5
1,967,618	-		Echvi_1680	0.56	+1.2
1,967,618	-		Echvi_1680	0.56	+0.1
1,967,618	-		Echvi_1680	0.56	+0.1
1,967,656	+		Echvi_1680	0.58	-0.4
1,967,656	+		Echvi_1680	0.58	-0.4
1,967,656	+		Echvi_1680	0.58	-0.2
1,967,656	+		Echvi_1680	0.58	-0.3
1,967,657	-		Echvi_1680	0.58	+0.1
1,967,657	-		Echvi_1680	0.58	+0.3
1,967,657	-		Echvi_1680	0.58	+0.3
1,967,659	-		Echvi_1680	0.58	-0.3
1,967,659	-		Echvi_1680	0.58	+1.3
1,967,659	-		Echvi_1680	0.58	+2.0
1,967,775	+		Echvi_1680	0.66	+0.3
1,967,776	-		Echvi_1680	0.66	-0.2
1,967,788	+		Echvi_1680	0.67	-1.1
1,967,789	-		Echvi_1680	0.67	+0.3
1,967,868	-		Echvi_1680	0.72	-0.4
1,967,902	-		Echvi_1680	0.74	-0.7
1,967,978	+		Echvi_1680	0.79	+0.6
1,968,054	-		Echvi_1680	0.83	+0.4
1,968,059	+		Echvi_1680	0.84	+0.4
1,968,060	-		Echvi_1680	0.84	+0.3
1,968,098	-		Echvi_1680	0.86	-0.7
1,968,134	-		Echvi_1680	0.88	-0.1
1,968,135	+		Echvi_1680	0.88	+0.3
1,968,136	-		Echvi_1680	0.88	-0.4
1,968,175	+				-0.2
1,968,206	+				-0.9
1,968,206	+				+0.4
1,968,207	-				+1.4
1,968,207	-				+0.3
1,968,210	+				-0.3
1,968,261	-				+0.1
1,968,281	+				+0.5
1,968,295	+				-0.9
1,968,295	+				-0.1
1,968,295	+				+0.8
1,968,296	-				+0.3
1,968,296	-				+0.5
1,968,296	-				-0.9
1,968,296	-				+0.5
1,968,296	-				-0.5
1,968,296	-				-0.5
1,968,307	-				+0.2
1,968,330	+				-1.2
1,968,392	+				+0.9
1,968,413	+				-0.3
1,968,414	-				+1.3
1,968,414	-				-0.1
1,968,432	+				+0.3
1,968,433	-				+0.3
1,968,434	+				+0.6
1,968,434	+				+0.1
1,968,435	-				+1.1
1,968,464	-				-1.1
1,968,472	+				+1.4
1,968,504	+				+1.5
1,968,507	+				-1.3
1,968,544	+				-0.7
1,968,591	+				-0.4
1,968,591	+				-0.6
1,968,616	+				+0.1
1,968,640	-				+0.7
1,968,641	+				+0.3
1,968,641	+				-0.8
1,968,803	-				+0.5
1,968,867	+		Echvi_1681	0.12	+0.0
1,968,871	+		Echvi_1681	0.12	-0.1
1,968,871	+		Echvi_1681	0.12	+0.4
1,968,872	-		Echvi_1681	0.12	+1.2
1,968,872	-		Echvi_1681	0.12	+0.6
1,968,888	+		Echvi_1681	0.13	+0.5
1,968,889	-		Echvi_1681	0.13	-1.1
1,969,019	-		Echvi_1681	0.19	-1.1
1,969,203	-		Echvi_1681	0.27	+0.2
1,969,256	-		Echvi_1681	0.30	-0.1
1,969,256	-		Echvi_1681	0.30	+0.6
1,969,256	-		Echvi_1681	0.30	+0.6
1,969,256	-		Echvi_1681	0.30	-0.1
1,969,257	+		Echvi_1681	0.30	+0.1
1,969,297	-		Echvi_1681	0.32	-0.1
1,969,300	+		Echvi_1681	0.32	+0.6
1,969,301	-		Echvi_1681	0.32	+0.6
1,969,301	-		Echvi_1681	0.32	+0.4
1,969,301	-		Echvi_1681	0.32	+0.9