Experiment: m.b. Cephalothin 0.005 mg/ml
Only strains with sufficient reads to estimate fitness are shown,
but the strain fitness values are still rather noisy and may be biased towards zero.
Strains near the edge of a gene are not shown as being associated with that
gene (they are in grey).
Strains in the central 10-90% of a gene are color coded by the insertion's strand.
Usually, "+" means that the selectable marker is encoded on the forward strand,
i.e., transcribed rightward.
500 nt CA264_20370 and CA264_20375 are separated by 88 nucleotides CA264_20375 and CA264_20380 are separated by 74 nucleotides CA264_20380 and CA264_20385 are separated by 310 nucleotides
CA264_20370: CA264_20370 - MFS transporter, at 4,694,374 to 4,695,693
_20370
CA264_20375: CA264_20375 - hypothetical protein, at 4,695,782 to 4,696,060
_20375
CA264_20380: CA264_20380 - lytic transglycosylase, at 4,696,135 to 4,698,423
_20380
CA264_20385: CA264_20385 - methyltransferase, at 4,698,734 to 4,699,378
_20385
Position (kb)
4696
4697
4698
4699 Strain fitness (log2 ratio)
-1
0
1
2
3 at 4695.170 kb on - strand, within CA264_20370 at 4695.518 kb on - strand, within CA264_20370 at 4695.691 kb on + strand at 4695.691 kb on + strand at 4695.705 kb on + strand at 4695.706 kb on - strand at 4695.779 kb on - strand at 4695.781 kb on + strand at 4695.781 kb on + strand at 4695.781 kb on + strand at 4695.782 kb on - strand at 4695.782 kb on - strand at 4695.782 kb on - strand at 4695.782 kb on - strand at 4695.782 kb on - strand at 4695.916 kb on + strand, within CA264_20375 at 4695.916 kb on + strand, within CA264_20375 at 4695.916 kb on + strand, within CA264_20375 at 4695.917 kb on - strand, within CA264_20375 at 4695.917 kb on - strand, within CA264_20375 at 4696.042 kb on + strand at 4696.043 kb on - strand at 4696.058 kb on + strand at 4696.058 kb on + strand at 4696.114 kb on + strand at 4696.115 kb on - strand at 4696.122 kb on - strand at 4696.122 kb on - strand at 4696.122 kb on - strand at 4696.122 kb on - strand at 4696.244 kb on + strand at 4696.244 kb on + strand at 4696.245 kb on - strand at 4696.264 kb on + strand at 4696.265 kb on - strand at 4696.269 kb on + strand at 4696.270 kb on - strand at 4696.274 kb on + strand at 4696.275 kb on - strand at 4696.275 kb on - strand at 4696.347 kb on + strand at 4696.354 kb on + strand at 4696.426 kb on - strand, within CA264_20380 at 4696.427 kb on + strand, within CA264_20380 at 4696.428 kb on - strand, within CA264_20380 at 4696.615 kb on + strand, within CA264_20380 at 4696.616 kb on - strand, within CA264_20380 at 4696.629 kb on + strand, within CA264_20380 at 4696.655 kb on + strand, within CA264_20380 at 4696.656 kb on - strand, within CA264_20380 at 4696.743 kb on + strand, within CA264_20380 at 4696.783 kb on + strand, within CA264_20380 at 4696.784 kb on - strand, within CA264_20380 at 4696.924 kb on + strand, within CA264_20380 at 4697.071 kb on - strand, within CA264_20380 at 4697.074 kb on - strand, within CA264_20380 at 4697.074 kb on - strand, within CA264_20380 at 4697.129 kb on + strand, within CA264_20380 at 4697.130 kb on - strand, within CA264_20380 at 4697.130 kb on - strand, within CA264_20380 at 4697.240 kb on - strand, within CA264_20380 at 4697.265 kb on + strand, within CA264_20380 at 4697.295 kb on - strand, within CA264_20380 at 4697.378 kb on + strand, within CA264_20380 at 4697.378 kb on + strand, within CA264_20380 at 4697.379 kb on - strand, within CA264_20380 at 4697.379 kb on - strand, within CA264_20380 at 4697.379 kb on - strand, within CA264_20380 at 4697.379 kb on - strand, within CA264_20380 at 4697.381 kb on + strand, within CA264_20380 at 4697.399 kb on - strand, within CA264_20380 at 4697.414 kb on + strand, within CA264_20380 at 4697.414 kb on + strand, within CA264_20380 at 4697.415 kb on - strand, within CA264_20380 at 4697.415 kb on - strand, within CA264_20380 at 4697.639 kb on + strand, within CA264_20380 at 4697.639 kb on + strand, within CA264_20380 at 4697.639 kb on + strand, within CA264_20380 at 4697.640 kb on - strand, within CA264_20380 at 4697.661 kb on + strand, within CA264_20380 at 4697.662 kb on - strand, within CA264_20380 at 4697.687 kb on + strand, within CA264_20380 at 4697.687 kb on + strand, within CA264_20380 at 4697.846 kb on + strand, within CA264_20380 at 4697.906 kb on + strand, within CA264_20380 at 4697.907 kb on - strand, within CA264_20380 at 4697.933 kb on + strand, within CA264_20380 at 4697.934 kb on - strand, within CA264_20380 at 4697.936 kb on + strand, within CA264_20380 at 4697.966 kb on + strand, within CA264_20380 at 4697.986 kb on - strand, within CA264_20380 at 4698.233 kb on - strand at 4698.286 kb on + strand at 4698.532 kb on - strand at 4698.607 kb on - strand at 4698.660 kb on + strand at 4698.661 kb on - strand at 4698.662 kb on + strand at 4698.733 kb on - strand at 4698.862 kb on - strand, within CA264_20385 at 4698.904 kb on + strand, within CA264_20385 at 4698.904 kb on + strand, within CA264_20385 at 4698.905 kb on - strand, within CA264_20385 at 4698.945 kb on + strand, within CA264_20385 at 4698.945 kb on + strand, within CA264_20385 at 4698.945 kb on + strand, within CA264_20385 at 4699.224 kb on + strand, within CA264_20385
Per-strain Table
Position Strand Gene LocusTag Fraction m.b. Cephalothin 0.005 mg/ml remove 4,695,170 - CA264_20370 0.60 -0.7 4,695,518 - CA264_20370 0.87 -0.6 4,695,691 + -0.7 4,695,691 + -0.4 4,695,705 + -1.2 4,695,706 - +0.1 4,695,779 - +0.4 4,695,781 + -0.8 4,695,781 + +1.7 4,695,781 + -0.2 4,695,782 - +0.2 4,695,782 - -0.6 4,695,782 - -0.6 4,695,782 - +0.7 4,695,782 - +0.5 4,695,916 + CA264_20375 0.48 -0.3 4,695,916 + CA264_20375 0.48 +0.3 4,695,916 + CA264_20375 0.48 +0.5 4,695,917 - CA264_20375 0.48 +0.2 4,695,917 - CA264_20375 0.48 +1.3 4,696,042 + -0.5 4,696,043 - -1.6 4,696,058 + -0.2 4,696,058 + +0.5 4,696,114 + +0.2 4,696,115 - -0.2 4,696,122 - -0.4 4,696,122 - +0.2 4,696,122 - +0.1 4,696,122 - -0.2 4,696,244 + +1.0 4,696,244 + +0.8 4,696,245 - -0.2 4,696,264 + +0.8 4,696,265 - -0.1 4,696,269 + +1.5 4,696,270 - +0.2 4,696,274 + +0.8 4,696,275 - +0.4 4,696,275 - +0.7 4,696,347 + +1.0 4,696,354 + +1.4 4,696,426 - CA264_20380 0.13 +0.3 4,696,427 + CA264_20380 0.13 +2.3 4,696,428 - CA264_20380 0.13 +0.0 4,696,615 + CA264_20380 0.21 +2.3 4,696,616 - CA264_20380 0.21 +0.9 4,696,629 + CA264_20380 0.22 -0.1 4,696,655 + CA264_20380 0.23 +1.3 4,696,656 - CA264_20380 0.23 +0.3 4,696,743 + CA264_20380 0.27 +1.5 4,696,783 + CA264_20380 0.28 +1.7 4,696,784 - CA264_20380 0.28 +1.5 4,696,924 + CA264_20380 0.34 +1.9 4,697,071 - CA264_20380 0.41 +1.6 4,697,074 - CA264_20380 0.41 +1.1 4,697,074 - CA264_20380 0.41 +0.6 4,697,129 + CA264_20380 0.43 +1.2 4,697,130 - CA264_20380 0.43 +1.7 4,697,130 - CA264_20380 0.43 +1.6 4,697,240 - CA264_20380 0.48 +1.5 4,697,265 + CA264_20380 0.49 +2.1 4,697,295 - CA264_20380 0.51 +3.0 4,697,378 + CA264_20380 0.54 +3.3 4,697,378 + CA264_20380 0.54 +1.6 4,697,379 - CA264_20380 0.54 +3.0 4,697,379 - CA264_20380 0.54 -0.7 4,697,379 - CA264_20380 0.54 +2.1 4,697,379 - CA264_20380 0.54 +2.2 4,697,381 + CA264_20380 0.54 +1.3 4,697,399 - CA264_20380 0.55 +1.7 4,697,414 + CA264_20380 0.56 +1.9 4,697,414 + CA264_20380 0.56 +2.0 4,697,415 - CA264_20380 0.56 +1.9 4,697,415 - CA264_20380 0.56 +1.9 4,697,639 + CA264_20380 0.66 +2.1 4,697,639 + CA264_20380 0.66 +2.4 4,697,639 + CA264_20380 0.66 +1.5 4,697,640 - CA264_20380 0.66 +2.2 4,697,661 + CA264_20380 0.67 +3.1 4,697,662 - CA264_20380 0.67 +1.5 4,697,687 + CA264_20380 0.68 +1.6 4,697,687 + CA264_20380 0.68 +1.7 4,697,846 + CA264_20380 0.75 +1.5 4,697,906 + CA264_20380 0.77 +2.1 4,697,907 - CA264_20380 0.77 +2.0 4,697,933 + CA264_20380 0.79 +2.1 4,697,934 - CA264_20380 0.79 +2.2 4,697,936 + CA264_20380 0.79 +2.2 4,697,966 + CA264_20380 0.80 +2.0 4,697,986 - CA264_20380 0.81 +1.3 4,698,233 - +2.0 4,698,286 + +2.0 4,698,532 - +0.9 4,698,607 - +0.6 4,698,660 + +0.1 4,698,661 - +0.3 4,698,662 + -0.1 4,698,733 - -0.1 4,698,862 - CA264_20385 0.20 +0.1 4,698,904 + CA264_20385 0.26 -0.4 4,698,904 + CA264_20385 0.26 -0.0 4,698,905 - CA264_20385 0.27 +1.0 4,698,945 + CA264_20385 0.33 -0.1 4,698,945 + CA264_20385 0.33 +0.3 4,698,945 + CA264_20385 0.33 +0.9 4,699,224 + CA264_20385 0.76 +1.0
Or see this region's nucleotide sequence