Experiment: m.b. Cephalothin 0.005 mg/ml
Only strains with sufficient reads to estimate fitness are shown,
but the strain fitness values are still rather noisy and may be biased towards zero.
Strains near the edge of a gene are not shown as being associated with that
gene (they are in grey).
Strains in the central 10-90% of a gene are color coded by the insertion's strand.
Usually, "+" means that the selectable marker is encoded on the forward strand,
i.e., transcribed rightward.
500 nt CA264_18065 and CA264_18070 are separated by 314 nucleotides CA264_18070 and CA264_18075 are separated by 688 nucleotides
CA264_18065: CA264_18065 - asparagine--tRNA ligase, at 4,200,230 to 4,201,669
_18065
CA264_18070: CA264_18070 - RNA polymerase sigma-54 factor, at 4,201,984 to 4,203,426
_18070
CA264_18075: CA264_18075 - 3-dehydro-L-gulonate 2-dehydrogenase, at 4,204,115 to 4,205,119
_18075
Position (kb) 4201
4202
4203
4204 Strain fitness (log2 ratio) -2
-1
0
1 at 4201.671 kb on + strand at 4201.673 kb on + strand at 4201.674 kb on - strand at 4201.674 kb on - strand at 4201.699 kb on + strand at 4201.700 kb on - strand at 4201.711 kb on + strand at 4201.725 kb on + strand at 4201.734 kb on - strand at 4201.901 kb on - strand at 4201.933 kb on + strand at 4203.425 kb on - strand at 4203.456 kb on - strand at 4203.456 kb on - strand at 4203.547 kb on - strand at 4203.547 kb on - strand at 4203.553 kb on - strand at 4203.559 kb on - strand at 4203.564 kb on + strand at 4203.564 kb on + strand at 4203.602 kb on + strand at 4203.602 kb on + strand at 4203.602 kb on + strand at 4203.603 kb on - strand at 4203.603 kb on - strand at 4203.603 kb on - strand at 4203.603 kb on - strand at 4203.603 kb on - strand at 4203.646 kb on + strand at 4203.655 kb on + strand at 4203.655 kb on + strand at 4203.655 kb on + strand at 4203.656 kb on - strand at 4203.679 kb on - strand at 4203.727 kb on + strand at 4203.728 kb on - strand at 4203.749 kb on + strand at 4203.749 kb on + strand at 4203.750 kb on - strand at 4203.751 kb on + strand at 4203.809 kb on + strand at 4203.858 kb on + strand at 4203.859 kb on - strand at 4203.989 kb on + strand at 4203.990 kb on - strand at 4204.033 kb on + strand at 4204.034 kb on - strand at 4204.078 kb on + strand at 4204.103 kb on - strand at 4204.103 kb on - strand at 4204.155 kb on + strand at 4204.156 kb on - strand at 4204.195 kb on + strand at 4204.312 kb on + strand, within CA264_18075 at 4204.312 kb on + strand, within CA264_18075 at 4204.312 kb on + strand, within CA264_18075 at 4204.313 kb on - strand, within CA264_18075 at 4204.314 kb on + strand, within CA264_18075 at 4204.341 kb on + strand, within CA264_18075 at 4204.357 kb on - strand, within CA264_18075 at 4204.394 kb on + strand, within CA264_18075 at 4204.394 kb on + strand, within CA264_18075 at 4204.395 kb on - strand, within CA264_18075
Per-strain Table
Position Strand Gene LocusTag Fraction m.b. Cephalothin 0.005 mg/ml remove 4,201,671 + +0.3 4,201,673 + -0.2 4,201,674 - +0.1 4,201,674 - +0.5 4,201,699 + +0.3 4,201,700 - -0.3 4,201,711 + -0.1 4,201,725 + -0.1 4,201,734 - -0.1 4,201,901 - +0.8 4,201,933 + +1.1 4,203,425 - +0.2 4,203,456 - +0.3 4,203,456 - +0.6 4,203,547 - +0.6 4,203,547 - +0.5 4,203,553 - +0.9 4,203,559 - +1.4 4,203,564 + -1.1 4,203,564 + -0.5 4,203,602 + -0.2 4,203,602 + -0.5 4,203,602 + -0.2 4,203,603 - +0.4 4,203,603 - +1.6 4,203,603 - -0.3 4,203,603 - +0.9 4,203,603 - -0.1 4,203,646 + -0.3 4,203,655 + +0.4 4,203,655 + -0.1 4,203,655 + -1.1 4,203,656 - -0.6 4,203,679 - +0.4 4,203,727 + +0.2 4,203,728 - -0.2 4,203,749 + -0.3 4,203,749 + +0.5 4,203,750 - +1.7 4,203,751 + -0.9 4,203,809 + -0.7 4,203,858 + -0.2 4,203,859 - -0.7 4,203,989 + +0.6 4,203,990 - +1.3 4,204,033 + +0.6 4,204,034 - -0.2 4,204,078 + -0.3 4,204,103 - +0.3 4,204,103 - -0.8 4,204,155 + -0.2 4,204,156 - +0.4 4,204,195 + -1.8 4,204,312 + CA264_18075 0.20 +0.0 4,204,312 + CA264_18075 0.20 -0.6 4,204,312 + CA264_18075 0.20 +0.3 4,204,313 - CA264_18075 0.20 -0.8 4,204,314 + CA264_18075 0.20 +0.2 4,204,341 + CA264_18075 0.22 +0.8 4,204,357 - CA264_18075 0.24 +0.1 4,204,394 + CA264_18075 0.28 +0.4 4,204,394 + CA264_18075 0.28 -0.2 4,204,395 - CA264_18075 0.28 +0.0
Or see this region's nucleotide sequence