Strain Fitness in Pontibacter actiniarum KMM 6156, DSM 19842 around CA264_14715

Experiment: m.b. Cephalothin 0.005 mg/ml

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Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

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500 ntCA264_14710 and CA264_14715 are separated by 130 nucleotidesCA264_14715 and CA264_14720 are separated by 191 nucleotides CA264_14710: CA264_14710 - geranylgeranyl reductase, at 3,458,260 to 3,459,498 _14710 CA264_14715: CA264_14715 - hypothetical protein, at 3,459,629 to 3,459,829 _14715 CA264_14720: CA264_14720 - sugar kinase, at 3,460,021 to 3,460,944 _14720 Position (kb) 3459 3460Strain fitness (log2 ratio) -2 -1 0 1 2at 3458.801 kb on - strand, within CA264_14710at 3458.921 kb on + strand, within CA264_14710at 3458.921 kb on + strand, within CA264_14710at 3458.942 kb on + strand, within CA264_14710at 3459.059 kb on - strand, within CA264_14710at 3459.078 kb on + strand, within CA264_14710at 3459.087 kb on - strand, within CA264_14710at 3459.087 kb on - strand, within CA264_14710at 3459.090 kb on + strand, within CA264_14710at 3459.091 kb on - strand, within CA264_14710at 3459.091 kb on - strand, within CA264_14710at 3459.091 kb on - strand, within CA264_14710at 3459.180 kb on + strand, within CA264_14710at 3459.180 kb on + strand, within CA264_14710at 3459.181 kb on - strand, within CA264_14710at 3459.182 kb on + strand, within CA264_14710at 3459.182 kb on + strand, within CA264_14710at 3459.182 kb on + strand, within CA264_14710at 3459.212 kb on + strand, within CA264_14710at 3459.219 kb on - strand, within CA264_14710at 3459.219 kb on - strand, within CA264_14710at 3459.222 kb on + strand, within CA264_14710at 3459.222 kb on + strand, within CA264_14710at 3459.223 kb on - strand, within CA264_14710at 3459.258 kb on + strand, within CA264_14710at 3459.266 kb on - strand, within CA264_14710at 3459.426 kb on + strandat 3459.580 kb on - strandat 3459.643 kb on - strandat 3459.668 kb on + strand, within CA264_14715at 3459.674 kb on - strand, within CA264_14715at 3459.697 kb on + strand, within CA264_14715at 3459.808 kb on + strand, within CA264_14715at 3459.829 kb on + strandat 3459.846 kb on + strandat 3459.846 kb on + strandat 3459.857 kb on + strandat 3459.857 kb on + strandat 3459.858 kb on - strandat 3459.858 kb on - strandat 3459.858 kb on - strandat 3459.861 kb on - strandat 3459.946 kb on + strandat 3459.946 kb on + strandat 3459.946 kb on + strandat 3459.946 kb on + strandat 3459.947 kb on - strandat 3459.948 kb on + strandat 3459.949 kb on - strandat 3459.954 kb on + strandat 3459.954 kb on + strandat 3459.954 kb on + strandat 3459.955 kb on - strandat 3459.955 kb on - strandat 3459.956 kb on + strandat 3459.956 kb on + strandat 3459.957 kb on - strandat 3459.957 kb on - strandat 3460.010 kb on - strandat 3460.019 kb on - strandat 3460.055 kb on - strandat 3460.126 kb on + strand, within CA264_14720

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Per-strain Table

Position Strand Gene LocusTag Fraction m.b. Cephalothin 0.005 mg/ml
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3,458,801 - CA264_14710 0.44 -0.6
3,458,921 + CA264_14710 0.53 -0.7
3,458,921 + CA264_14710 0.53 +1.5
3,458,942 + CA264_14710 0.55 +0.6
3,459,059 - CA264_14710 0.64 -0.7
3,459,078 + CA264_14710 0.66 -0.6
3,459,087 - CA264_14710 0.67 +0.6
3,459,087 - CA264_14710 0.67 -0.9
3,459,090 + CA264_14710 0.67 +0.3
3,459,091 - CA264_14710 0.67 -1.9
3,459,091 - CA264_14710 0.67 +0.7
3,459,091 - CA264_14710 0.67 -1.8
3,459,180 + CA264_14710 0.74 +0.2
3,459,180 + CA264_14710 0.74 +0.3
3,459,181 - CA264_14710 0.74 -0.8
3,459,182 + CA264_14710 0.74 +0.1
3,459,182 + CA264_14710 0.74 +0.9
3,459,182 + CA264_14710 0.74 -0.4
3,459,212 + CA264_14710 0.77 +0.3
3,459,219 - CA264_14710 0.77 -0.1
3,459,219 - CA264_14710 0.77 -0.7
3,459,222 + CA264_14710 0.78 +0.0
3,459,222 + CA264_14710 0.78 +0.3
3,459,223 - CA264_14710 0.78 +1.4
3,459,258 + CA264_14710 0.81 +0.3
3,459,266 - CA264_14710 0.81 -0.1
3,459,426 + -0.2
3,459,580 - -0.1
3,459,643 - +0.2
3,459,668 + CA264_14715 0.19 +0.3
3,459,674 - CA264_14715 0.22 +0.0
3,459,697 + CA264_14715 0.34 +1.8
3,459,808 + CA264_14715 0.89 +0.7
3,459,829 + +0.7
3,459,846 + +2.2
3,459,846 + +0.3
3,459,857 + +0.6
3,459,857 + -0.3
3,459,858 - +0.9
3,459,858 - -0.4
3,459,858 - +1.0
3,459,861 - -0.2
3,459,946 + +1.2
3,459,946 + +1.0
3,459,946 + +2.7
3,459,946 + +0.9
3,459,947 - -0.8
3,459,948 + +0.7
3,459,949 - -0.0
3,459,954 + +0.7
3,459,954 + -0.4
3,459,954 + +2.3
3,459,955 - -0.1
3,459,955 - +0.1
3,459,956 + -0.1
3,459,956 + +1.4
3,459,957 - +1.3
3,459,957 - +0.8
3,460,010 - +0.1
3,460,019 - -0.6
3,460,055 - +1.1
3,460,126 + CA264_14720 0.11 +1.2

Or see this region's nucleotide sequence