Experiment: m.b. Cephalothin 0.005 mg/ml
Only strains with sufficient reads to estimate fitness are shown,
but the strain fitness values are still rather noisy and may be biased towards zero.
Strains near the edge of a gene are not shown as being associated with that
gene (they are in grey).
Strains in the central 10-90% of a gene are color coded by the insertion's strand.
Usually, "+" means that the selectable marker is encoded on the forward strand,
i.e., transcribed rightward.
500 nt CA264_14585 and CA264_14590 are separated by 131 nucleotides CA264_14590 and CA264_14595 are separated by 549 nucleotides
CA264_14585: CA264_14585 - YicC family protein, at 3,428,488 to 3,429,369
_14585
CA264_14590: CA264_14590 - phosphoribosylformylglycinamidine synthase I, at 3,429,501 to 3,430,193
_14590
CA264_14595: CA264_14595 - sodium-independent anion transporter, at 3,430,743 to 3,432,284
_14595
Position (kb)
3429
3430
3431 Strain fitness (log2 ratio)
-2
-1
0
1
2 at 3428.515 kb on + strand at 3428.620 kb on - strand, within CA264_14585 at 3428.654 kb on + strand, within CA264_14585 at 3428.673 kb on - strand, within CA264_14585 at 3428.728 kb on - strand, within CA264_14585 at 3428.729 kb on + strand, within CA264_14585 at 3428.730 kb on - strand, within CA264_14585 at 3428.730 kb on - strand, within CA264_14585 at 3428.730 kb on - strand, within CA264_14585 at 3428.732 kb on + strand, within CA264_14585 at 3428.732 kb on + strand, within CA264_14585 at 3428.733 kb on - strand, within CA264_14585 at 3428.733 kb on - strand, within CA264_14585 at 3429.102 kb on + strand, within CA264_14585 at 3429.103 kb on - strand, within CA264_14585 at 3429.103 kb on - strand, within CA264_14585 at 3429.104 kb on + strand, within CA264_14585 at 3429.105 kb on - strand, within CA264_14585 at 3429.105 kb on - strand, within CA264_14585 at 3429.105 kb on - strand, within CA264_14585 at 3429.108 kb on - strand, within CA264_14585 at 3429.108 kb on - strand, within CA264_14585 at 3429.108 kb on - strand, within CA264_14585 at 3429.130 kb on + strand, within CA264_14585 at 3429.230 kb on + strand, within CA264_14585 at 3429.231 kb on - strand, within CA264_14585 at 3429.258 kb on + strand, within CA264_14585 at 3429.369 kb on + strand at 3429.370 kb on - strand at 3429.370 kb on - strand at 3429.466 kb on - strand at 3429.469 kb on + strand at 3429.481 kb on - strand at 3429.486 kb on - strand at 3429.514 kb on + strand at 3429.563 kb on + strand at 3429.617 kb on - strand, within CA264_14590 at 3429.632 kb on + strand, within CA264_14590 at 3429.634 kb on + strand, within CA264_14590 at 3429.635 kb on - strand, within CA264_14590 at 3429.666 kb on + strand, within CA264_14590 at 3429.667 kb on - strand, within CA264_14590 at 3429.701 kb on + strand, within CA264_14590 at 3429.701 kb on + strand, within CA264_14590 at 3429.702 kb on - strand, within CA264_14590 at 3429.704 kb on + strand, within CA264_14590 at 3429.704 kb on + strand, within CA264_14590 at 3429.704 kb on + strand, within CA264_14590 at 3429.846 kb on + strand, within CA264_14590 at 3429.846 kb on + strand, within CA264_14590 at 3429.846 kb on + strand, within CA264_14590 at 3429.847 kb on - strand, within CA264_14590 at 3429.847 kb on - strand, within CA264_14590 at 3429.906 kb on + strand, within CA264_14590 at 3429.906 kb on + strand, within CA264_14590 at 3430.000 kb on - strand, within CA264_14590 at 3430.170 kb on - strand at 3430.181 kb on - strand at 3430.201 kb on + strand at 3430.220 kb on + strand at 3430.248 kb on - strand at 3430.289 kb on + strand at 3430.290 kb on - strand at 3430.372 kb on + strand at 3430.373 kb on - strand at 3430.434 kb on + strand at 3430.443 kb on + strand at 3430.444 kb on - strand at 3430.448 kb on - strand at 3430.464 kb on + strand at 3430.465 kb on - strand at 3430.465 kb on - strand at 3430.466 kb on + strand at 3430.466 kb on + strand at 3430.467 kb on - strand at 3430.496 kb on + strand at 3430.507 kb on - strand at 3430.518 kb on + strand at 3430.518 kb on + strand at 3430.519 kb on - strand at 3430.519 kb on - strand at 3430.521 kb on - strand at 3430.536 kb on - strand at 3430.641 kb on + strand at 3430.643 kb on + strand at 3430.644 kb on - strand at 3430.644 kb on - strand at 3430.723 kb on + strand at 3430.728 kb on + strand at 3430.737 kb on - strand at 3430.737 kb on - strand at 3430.791 kb on - strand at 3430.791 kb on - strand at 3430.795 kb on + strand at 3430.902 kb on - strand, within CA264_14595 at 3430.913 kb on - strand, within CA264_14595 at 3430.917 kb on - strand, within CA264_14595 at 3431.112 kb on + strand, within CA264_14595 at 3431.112 kb on + strand, within CA264_14595 at 3431.112 kb on + strand, within CA264_14595 at 3431.112 kb on + strand, within CA264_14595 at 3431.113 kb on - strand, within CA264_14595 at 3431.113 kb on - strand, within CA264_14595 at 3431.113 kb on - strand, within CA264_14595 at 3431.179 kb on + strand, within CA264_14595
Per-strain Table
Position Strand Gene LocusTag Fraction m.b. Cephalothin 0.005 mg/ml remove 3,428,515 + -0.3 3,428,620 - CA264_14585 0.15 -0.4 3,428,654 + CA264_14585 0.19 +0.7 3,428,673 - CA264_14585 0.21 +1.4 3,428,728 - CA264_14585 0.27 -1.2 3,428,729 + CA264_14585 0.27 -1.6 3,428,730 - CA264_14585 0.27 -0.3 3,428,730 - CA264_14585 0.27 -1.4 3,428,730 - CA264_14585 0.27 -0.4 3,428,732 + CA264_14585 0.28 -1.6 3,428,732 + CA264_14585 0.28 -0.6 3,428,733 - CA264_14585 0.28 -0.7 3,428,733 - CA264_14585 0.28 +0.4 3,429,102 + CA264_14585 0.70 -0.6 3,429,103 - CA264_14585 0.70 -1.0 3,429,103 - CA264_14585 0.70 -1.8 3,429,104 + CA264_14585 0.70 -0.8 3,429,105 - CA264_14585 0.70 +0.2 3,429,105 - CA264_14585 0.70 -0.9 3,429,105 - CA264_14585 0.70 -0.6 3,429,108 - CA264_14585 0.70 -1.6 3,429,108 - CA264_14585 0.70 -0.8 3,429,108 - CA264_14585 0.70 -0.8 3,429,130 + CA264_14585 0.73 -1.2 3,429,230 + CA264_14585 0.84 -0.6 3,429,231 - CA264_14585 0.84 -0.6 3,429,258 + CA264_14585 0.87 -1.4 3,429,369 + -1.4 3,429,370 - -2.1 3,429,370 - -0.8 3,429,466 - -0.3 3,429,469 + +0.0 3,429,481 - -0.7 3,429,486 - -0.3 3,429,514 + -0.3 3,429,563 + -0.6 3,429,617 - CA264_14590 0.17 +0.3 3,429,632 + CA264_14590 0.19 +0.1 3,429,634 + CA264_14590 0.19 +0.1 3,429,635 - CA264_14590 0.19 -0.9 3,429,666 + CA264_14590 0.24 -0.6 3,429,667 - CA264_14590 0.24 -0.6 3,429,701 + CA264_14590 0.29 -0.2 3,429,701 + CA264_14590 0.29 +1.1 3,429,702 - CA264_14590 0.29 +2.4 3,429,704 + CA264_14590 0.29 -0.1 3,429,704 + CA264_14590 0.29 -0.1 3,429,704 + CA264_14590 0.29 +0.3 3,429,846 + CA264_14590 0.50 -1.1 3,429,846 + CA264_14590 0.50 +1.1 3,429,846 + CA264_14590 0.50 +0.2 3,429,847 - CA264_14590 0.50 +1.1 3,429,847 - CA264_14590 0.50 +0.3 3,429,906 + CA264_14590 0.58 -0.2 3,429,906 + CA264_14590 0.58 +0.1 3,430,000 - CA264_14590 0.72 -0.0 3,430,170 - +0.3 3,430,181 - -0.5 3,430,201 + +0.8 3,430,220 + -1.8 3,430,248 - -0.7 3,430,289 + -1.9 3,430,290 - -0.8 3,430,372 + -0.1 3,430,373 - +0.1 3,430,434 + -1.3 3,430,443 + +0.2 3,430,444 - +2.1 3,430,448 - +0.2 3,430,464 + +0.4 3,430,465 - -0.0 3,430,465 - +0.1 3,430,466 + -0.6 3,430,466 + -1.4 3,430,467 - +0.8 3,430,496 + +0.5 3,430,507 - -1.4 3,430,518 + -0.7 3,430,518 + -1.9 3,430,519 - +1.7 3,430,519 - -0.2 3,430,521 - -0.4 3,430,536 - -0.4 3,430,641 + -0.3 3,430,643 + -0.3 3,430,644 - -0.8 3,430,644 - -0.2 3,430,723 + -0.1 3,430,728 + +1.1 3,430,737 - -0.4 3,430,737 - -0.5 3,430,791 - -0.6 3,430,791 - -1.2 3,430,795 + -0.1 3,430,902 - CA264_14595 0.10 +0.3 3,430,913 - CA264_14595 0.11 -0.2 3,430,917 - CA264_14595 0.11 -1.1 3,431,112 + CA264_14595 0.24 -0.3 3,431,112 + CA264_14595 0.24 -0.7 3,431,112 + CA264_14595 0.24 -0.3 3,431,112 + CA264_14595 0.24 +0.9 3,431,113 - CA264_14595 0.24 +0.3 3,431,113 - CA264_14595 0.24 -0.2 3,431,113 - CA264_14595 0.24 -1.0 3,431,179 + CA264_14595 0.28 -0.4
Or see this region's nucleotide sequence