Experiment: m.b. Cephalothin 0.005 mg/ml
Only strains with sufficient reads to estimate fitness are shown,
but the strain fitness values are still rather noisy and may be biased towards zero.
Strains near the edge of a gene are not shown as being associated with that
gene (they are in grey).
Strains in the central 10-90% of a gene are color coded by the insertion's strand.
Usually, "+" means that the selectable marker is encoded on the forward strand,
i.e., transcribed rightward.
500 nt CA264_14175 and CA264_14180 are separated by 138 nucleotides CA264_14180 and CA264_14185 are separated by 139 nucleotides CA264_14185 and CA264_14190 are separated by 74 nucleotides CA264_14190 and CA264_14195 are separated by 369 nucleotides
CA264_14175: CA264_14175 - hypothetical protein, at 3,329,432 to 3,330,058
_14175
CA264_14180: CA264_14180 - transcriptional regulator, at 3,330,197 to 3,330,583
_14180
CA264_14185: CA264_14185 - noncanonical pyrimidine nucleotidase, YjjG family, at 3,330,723 to 3,331,424
_14185
CA264_14190: CA264_14190 - hypothetical protein, at 3,331,499 to 3,331,918
_14190
CA264_14195: CA264_14195 - 1-pyrroline-5-carboxylate dehydrogenase, at 3,332,288 to 3,333,922
_14195
Position (kb)
3330
3331
3332 Strain fitness (log2 ratio)
-1
0
1
2 at 3329.761 kb on + strand, within CA264_14175 at 3329.762 kb on - strand, within CA264_14175 at 3329.769 kb on + strand, within CA264_14175 at 3329.769 kb on + strand, within CA264_14175 at 3329.784 kb on + strand, within CA264_14175 at 3329.831 kb on - strand, within CA264_14175 at 3329.877 kb on + strand, within CA264_14175 at 3329.917 kb on - strand, within CA264_14175 at 3330.076 kb on + strand at 3330.110 kb on - strand at 3330.115 kb on - strand at 3330.120 kb on + strand at 3330.121 kb on - strand at 3330.121 kb on - strand at 3330.141 kb on - strand at 3330.185 kb on + strand at 3330.186 kb on - strand at 3330.190 kb on - strand at 3330.196 kb on + strand at 3330.419 kb on + strand, within CA264_14180 at 3330.419 kb on + strand, within CA264_14180 at 3330.420 kb on - strand, within CA264_14180 at 3330.420 kb on - strand, within CA264_14180 at 3330.422 kb on + strand, within CA264_14180 at 3330.422 kb on + strand, within CA264_14180 at 3330.423 kb on - strand, within CA264_14180 at 3330.423 kb on - strand, within CA264_14180 at 3330.513 kb on - strand, within CA264_14180 at 3330.519 kb on + strand, within CA264_14180 at 3330.582 kb on - strand at 3330.606 kb on - strand at 3330.606 kb on - strand at 3330.606 kb on - strand at 3330.633 kb on + strand at 3330.633 kb on + strand at 3330.634 kb on - strand at 3330.634 kb on - strand at 3330.700 kb on + strand at 3330.701 kb on - strand at 3330.733 kb on - strand at 3330.733 kb on - strand at 3330.803 kb on + strand, within CA264_14185 at 3330.803 kb on + strand, within CA264_14185 at 3330.827 kb on + strand, within CA264_14185 at 3330.828 kb on - strand, within CA264_14185 at 3330.862 kb on - strand, within CA264_14185 at 3330.862 kb on - strand, within CA264_14185 at 3330.870 kb on + strand, within CA264_14185 at 3330.870 kb on + strand, within CA264_14185 at 3330.871 kb on - strand, within CA264_14185 at 3330.872 kb on + strand, within CA264_14185 at 3330.872 kb on + strand, within CA264_14185 at 3330.872 kb on + strand, within CA264_14185 at 3330.872 kb on + strand, within CA264_14185 at 3330.873 kb on - strand, within CA264_14185 at 3330.903 kb on + strand, within CA264_14185 at 3330.905 kb on + strand, within CA264_14185 at 3330.905 kb on + strand, within CA264_14185 at 3330.905 kb on + strand, within CA264_14185 at 3330.906 kb on - strand, within CA264_14185 at 3330.906 kb on - strand, within CA264_14185 at 3331.045 kb on + strand, within CA264_14185 at 3331.075 kb on - strand, within CA264_14185 at 3331.089 kb on + strand, within CA264_14185 at 3331.107 kb on - strand, within CA264_14185 at 3331.107 kb on - strand, within CA264_14185 at 3331.202 kb on + strand, within CA264_14185 at 3331.202 kb on + strand, within CA264_14185 at 3331.203 kb on - strand, within CA264_14185 at 3331.288 kb on - strand, within CA264_14185 at 3331.299 kb on - strand, within CA264_14185 at 3331.300 kb on + strand, within CA264_14185 at 3331.301 kb on - strand, within CA264_14185 at 3331.333 kb on + strand, within CA264_14185 at 3331.383 kb on + strand at 3331.383 kb on + strand at 3331.408 kb on + strand at 3331.408 kb on + strand at 3331.409 kb on - strand at 3331.409 kb on - strand at 3331.465 kb on - strand at 3331.500 kb on + strand at 3331.501 kb on - strand at 3331.501 kb on - strand at 3331.555 kb on + strand, within CA264_14190 at 3331.610 kb on - strand, within CA264_14190 at 3331.718 kb on - strand, within CA264_14190 at 3331.720 kb on - strand, within CA264_14190 at 3331.747 kb on - strand, within CA264_14190 at 3331.834 kb on + strand, within CA264_14190 at 3331.834 kb on + strand, within CA264_14190 at 3331.834 kb on + strand, within CA264_14190 at 3331.896 kb on + strand at 3331.919 kb on - strand at 3331.970 kb on + strand at 3331.970 kb on + strand at 3331.971 kb on - strand at 3331.985 kb on + strand at 3332.006 kb on + strand at 3332.216 kb on + strand at 3332.216 kb on + strand at 3332.216 kb on + strand at 3332.216 kb on + strand at 3332.217 kb on - strand at 3332.217 kb on - strand at 3332.240 kb on - strand at 3332.245 kb on + strand at 3332.245 kb on + strand at 3332.246 kb on - strand at 3332.246 kb on - strand at 3332.275 kb on - strand at 3332.279 kb on - strand at 3332.279 kb on - strand at 3332.279 kb on - strand at 3332.279 kb on - strand at 3332.279 kb on - strand at 3332.279 kb on - strand at 3332.281 kb on - strand at 3332.285 kb on + strand at 3332.285 kb on + strand at 3332.310 kb on + strand at 3332.423 kb on + strand at 3332.423 kb on + strand at 3332.424 kb on - strand at 3332.424 kb on - strand
Per-strain Table
Position Strand Gene LocusTag Fraction m.b. Cephalothin 0.005 mg/ml remove 3,329,761 + CA264_14175 0.52 +2.4 3,329,762 - CA264_14175 0.53 +1.6 3,329,769 + CA264_14175 0.54 +0.7 3,329,769 + CA264_14175 0.54 +0.9 3,329,784 + CA264_14175 0.56 +1.2 3,329,831 - CA264_14175 0.64 +0.6 3,329,877 + CA264_14175 0.71 +1.0 3,329,917 - CA264_14175 0.77 +0.1 3,330,076 + +1.3 3,330,110 - +1.6 3,330,115 - +0.1 3,330,120 + +0.9 3,330,121 - +1.1 3,330,121 - -0.5 3,330,141 - +0.7 3,330,185 + +1.1 3,330,186 - +1.2 3,330,190 - +0.9 3,330,196 + +0.8 3,330,419 + CA264_14180 0.57 +1.4 3,330,419 + CA264_14180 0.57 +0.9 3,330,420 - CA264_14180 0.58 +0.6 3,330,420 - CA264_14180 0.58 +0.2 3,330,422 + CA264_14180 0.58 +1.9 3,330,422 + CA264_14180 0.58 +0.7 3,330,423 - CA264_14180 0.58 +1.5 3,330,423 - CA264_14180 0.58 +0.9 3,330,513 - CA264_14180 0.82 +1.4 3,330,519 + CA264_14180 0.83 +0.8 3,330,582 - +1.1 3,330,606 - +2.7 3,330,606 - +0.9 3,330,606 - +1.3 3,330,633 + +0.7 3,330,633 + +1.1 3,330,634 - +0.5 3,330,634 - +1.7 3,330,700 + +0.3 3,330,701 - +0.8 3,330,733 - +0.6 3,330,733 - +0.0 3,330,803 + CA264_14185 0.11 -0.1 3,330,803 + CA264_14185 0.11 +0.2 3,330,827 + CA264_14185 0.15 +0.1 3,330,828 - CA264_14185 0.15 +0.4 3,330,862 - CA264_14185 0.20 +0.7 3,330,862 - CA264_14185 0.20 -0.1 3,330,870 + CA264_14185 0.21 -0.3 3,330,870 + CA264_14185 0.21 -1.3 3,330,871 - CA264_14185 0.21 +0.0 3,330,872 + CA264_14185 0.21 +0.3 3,330,872 + CA264_14185 0.21 -0.7 3,330,872 + CA264_14185 0.21 +0.2 3,330,872 + CA264_14185 0.21 +0.2 3,330,873 - CA264_14185 0.21 +1.5 3,330,903 + CA264_14185 0.26 +0.1 3,330,905 + CA264_14185 0.26 +0.5 3,330,905 + CA264_14185 0.26 +0.5 3,330,905 + CA264_14185 0.26 +1.1 3,330,906 - CA264_14185 0.26 +0.5 3,330,906 - CA264_14185 0.26 +0.1 3,331,045 + CA264_14185 0.46 +1.0 3,331,075 - CA264_14185 0.50 -0.0 3,331,089 + CA264_14185 0.52 +1.6 3,331,107 - CA264_14185 0.55 +0.6 3,331,107 - CA264_14185 0.55 +1.7 3,331,202 + CA264_14185 0.68 -1.2 3,331,202 + CA264_14185 0.68 +1.4 3,331,203 - CA264_14185 0.68 -0.2 3,331,288 - CA264_14185 0.80 +0.4 3,331,299 - CA264_14185 0.82 -0.0 3,331,300 + CA264_14185 0.82 -0.1 3,331,301 - CA264_14185 0.82 +1.4 3,331,333 + CA264_14185 0.87 +0.0 3,331,383 + +1.0 3,331,383 + +0.0 3,331,408 + +0.2 3,331,408 + -1.0 3,331,409 - -0.1 3,331,409 - -0.3 3,331,465 - +0.4 3,331,500 + -0.7 3,331,501 - -0.5 3,331,501 - -0.8 3,331,555 + CA264_14190 0.13 -1.3 3,331,610 - CA264_14190 0.26 -0.2 3,331,718 - CA264_14190 0.52 -0.5 3,331,720 - CA264_14190 0.53 -0.5 3,331,747 - CA264_14190 0.59 +0.4 3,331,834 + CA264_14190 0.80 -0.3 3,331,834 + CA264_14190 0.80 +0.5 3,331,834 + CA264_14190 0.80 +0.3 3,331,896 + -1.7 3,331,919 - -0.3 3,331,970 + +1.3 3,331,970 + +0.2 3,331,971 - +1.0 3,331,985 + -0.1 3,332,006 + +1.1 3,332,216 + +0.4 3,332,216 + +1.1 3,332,216 + +0.7 3,332,216 + +0.8 3,332,217 - +1.2 3,332,217 - +2.0 3,332,240 - +0.9 3,332,245 + +1.2 3,332,245 + +0.0 3,332,246 - +2.5 3,332,246 - +1.3 3,332,275 - +0.2 3,332,279 - +0.2 3,332,279 - +1.4 3,332,279 - +2.5 3,332,279 - +2.0 3,332,279 - -0.1 3,332,279 - +2.0 3,332,281 - +1.6 3,332,285 + +0.6 3,332,285 + +1.5 3,332,310 + +0.4 3,332,423 + +2.0 3,332,423 + +1.7 3,332,424 - +0.9 3,332,424 - +1.4
Or see this region's nucleotide sequence