Experiment: m.b. Cephalothin 0.005 mg/ml
Only strains with sufficient reads to estimate fitness are shown,
but the strain fitness values are still rather noisy and may be biased towards zero.
Strains near the edge of a gene are not shown as being associated with that
gene (they are in grey).
Strains in the central 10-90% of a gene are color coded by the insertion's strand.
Usually, "+" means that the selectable marker is encoded on the forward strand,
i.e., transcribed rightward.
500 nt CA264_13450 and CA264_13455 are separated by 120 nucleotides CA264_13455 and CA264_13460 are separated by 627 nucleotides
CA264_13450: CA264_13450 - hypothetical protein, at 3,140,784 to 3,144,110
_13450
CA264_13455: CA264_13455 - tRNA-Ala, at 3,144,231 to 3,144,307
_13455
CA264_13460: CA264_13460 - hypothetical protein, at 3,144,935 to 3,145,369
_13460
Position (kb)
3144
3145 Strain fitness (log2 ratio)
-2
-1
0
1
2 at 3143.253 kb on - strand, within CA264_13450 at 3143.256 kb on + strand, within CA264_13450 at 3143.257 kb on - strand, within CA264_13450 at 3143.261 kb on - strand, within CA264_13450 at 3143.287 kb on - strand, within CA264_13450 at 3143.295 kb on - strand, within CA264_13450 at 3143.347 kb on - strand, within CA264_13450 at 3143.352 kb on + strand, within CA264_13450 at 3143.419 kb on - strand, within CA264_13450 at 3143.463 kb on + strand, within CA264_13450 at 3143.486 kb on - strand, within CA264_13450 at 3143.498 kb on + strand, within CA264_13450 at 3143.511 kb on + strand, within CA264_13450 at 3143.512 kb on - strand, within CA264_13450 at 3143.565 kb on - strand, within CA264_13450 at 3143.640 kb on + strand, within CA264_13450 at 3143.641 kb on - strand, within CA264_13450 at 3143.741 kb on - strand, within CA264_13450 at 3143.847 kb on + strand at 3143.848 kb on - strand at 3143.848 kb on - strand at 3143.851 kb on + strand at 3143.934 kb on + strand at 3143.934 kb on + strand at 3143.999 kb on + strand at 3144.009 kb on - strand at 3144.049 kb on - strand at 3144.064 kb on - strand at 3144.094 kb on + strand at 3144.094 kb on + strand at 3144.095 kb on - strand at 3144.095 kb on - strand at 3144.095 kb on - strand at 3144.173 kb on + strand at 3144.375 kb on + strand at 3144.400 kb on - strand at 3144.403 kb on + strand at 3144.442 kb on + strand at 3144.443 kb on - strand at 3144.468 kb on - strand at 3144.468 kb on - strand at 3144.474 kb on + strand at 3144.618 kb on - strand at 3144.629 kb on - strand at 3144.631 kb on + strand at 3144.631 kb on + strand at 3144.632 kb on - strand at 3144.632 kb on - strand at 3144.632 kb on - strand at 3144.678 kb on - strand at 3144.682 kb on - strand at 3144.682 kb on - strand at 3144.682 kb on - strand at 3144.694 kb on + strand at 3144.703 kb on + strand at 3144.705 kb on + strand at 3144.706 kb on - strand at 3144.706 kb on - strand at 3144.709 kb on + strand at 3144.712 kb on + strand at 3144.738 kb on + strand at 3144.741 kb on + strand at 3144.743 kb on + strand at 3144.743 kb on + strand at 3144.743 kb on + strand at 3144.744 kb on - strand at 3144.830 kb on - strand at 3144.833 kb on + strand at 3144.833 kb on + strand at 3144.833 kb on + strand at 3144.834 kb on - strand at 3144.837 kb on + strand at 3144.898 kb on - strand at 3144.906 kb on - strand at 3144.934 kb on + strand at 3144.934 kb on + strand at 3144.979 kb on - strand, within CA264_13460 at 3145.130 kb on + strand, within CA264_13460 at 3145.130 kb on + strand, within CA264_13460 at 3145.133 kb on + strand, within CA264_13460 at 3145.133 kb on + strand, within CA264_13460 at 3145.134 kb on - strand, within CA264_13460 at 3145.134 kb on - strand, within CA264_13460 at 3145.142 kb on + strand, within CA264_13460
Per-strain Table
Position Strand Gene LocusTag Fraction m.b. Cephalothin 0.005 mg/ml remove 3,143,253 - CA264_13450 0.74 +1.7 3,143,256 + CA264_13450 0.74 +0.0 3,143,257 - CA264_13450 0.74 -0.5 3,143,261 - CA264_13450 0.74 -0.5 3,143,287 - CA264_13450 0.75 +0.5 3,143,295 - CA264_13450 0.75 +1.2 3,143,347 - CA264_13450 0.77 -0.8 3,143,352 + CA264_13450 0.77 -0.1 3,143,419 - CA264_13450 0.79 -0.7 3,143,463 + CA264_13450 0.81 +1.0 3,143,486 - CA264_13450 0.81 +1.2 3,143,498 + CA264_13450 0.82 +0.9 3,143,511 + CA264_13450 0.82 +1.0 3,143,512 - CA264_13450 0.82 -1.3 3,143,565 - CA264_13450 0.84 +0.1 3,143,640 + CA264_13450 0.86 +1.1 3,143,641 - CA264_13450 0.86 +0.2 3,143,741 - CA264_13450 0.89 -0.0 3,143,847 + +0.1 3,143,848 - +0.6 3,143,848 - +0.6 3,143,851 + +2.4 3,143,934 + -1.2 3,143,934 + +0.1 3,143,999 + +0.7 3,144,009 - -0.1 3,144,049 - -0.2 3,144,064 - +0.4 3,144,094 + -0.4 3,144,094 + -0.4 3,144,095 - -0.4 3,144,095 - -0.3 3,144,095 - -0.5 3,144,173 + +0.2 3,144,375 + +0.2 3,144,400 - -1.0 3,144,403 + -0.4 3,144,442 + -0.7 3,144,443 - -0.3 3,144,468 - +0.3 3,144,468 - -0.7 3,144,474 + +0.0 3,144,618 - +0.8 3,144,629 - +0.3 3,144,631 + +0.3 3,144,631 + +1.5 3,144,632 - +2.4 3,144,632 - -0.3 3,144,632 - -0.2 3,144,678 - -1.8 3,144,682 - +1.4 3,144,682 - +0.3 3,144,682 - -0.9 3,144,694 + +1.1 3,144,703 + +0.3 3,144,705 + +0.2 3,144,706 - +1.1 3,144,706 - +1.5 3,144,709 + -0.3 3,144,712 + +2.2 3,144,738 + -0.3 3,144,741 + +1.2 3,144,743 + -0.9 3,144,743 + +0.5 3,144,743 + -1.4 3,144,744 - -0.9 3,144,830 - +0.4 3,144,833 + +0.3 3,144,833 + +2.1 3,144,833 + -0.2 3,144,834 - -0.5 3,144,837 + +0.4 3,144,898 - -0.4 3,144,906 - -0.7 3,144,934 + -0.9 3,144,934 + -0.1 3,144,979 - CA264_13460 0.10 -0.0 3,145,130 + CA264_13460 0.45 +0.5 3,145,130 + CA264_13460 0.45 -0.1 3,145,133 + CA264_13460 0.46 +2.3 3,145,133 + CA264_13460 0.46 +0.1 3,145,134 - CA264_13460 0.46 -0.3 3,145,134 - CA264_13460 0.46 +0.8 3,145,142 + CA264_13460 0.48 +0.5
Or see this region's nucleotide sequence