Strain Fitness in Pontibacter actiniarum KMM 6156, DSM 19842 around CA264_10825
Experiment: m.b. Cephalothin 0.005 mg/ml
Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.
Per-strain Table
Position | Strand | Gene | LocusTag | Fraction | m.b. Cephalothin 0.005 mg/ml |
---|---|---|---|---|---|
remove | |||||
2,500,927 | + | -0.5 | |||
2,500,945 | - | -1.2 | |||
2,500,951 | + | +0.5 | |||
2,500,951 | + | -0.4 | |||
2,500,952 | - | +0.8 | |||
2,500,952 | - | +1.6 | |||
2,500,952 | - | +1.0 | |||
2,500,952 | - | +1.0 | |||
2,500,954 | - | +1.5 | |||
2,501,734 | - | -1.9 | |||
2,502,353 | - | CA264_10825 | 0.46 | +0.5 | |
2,502,515 | - | CA264_10825 | 0.57 | -1.0 | |
2,502,515 | - | CA264_10825 | 0.57 | -1.4 | |
2,502,517 | - | CA264_10825 | 0.58 | -1.7 | |
2,502,604 | - | CA264_10825 | 0.64 | -1.7 | |
2,502,773 | + | CA264_10825 | 0.76 | -3.1 | |
2,503,088 | - | -3.4 | |||
2,503,093 | + | -2.4 | |||
2,503,093 | + | -4.1 | |||
2,503,094 | - | -2.1 | |||
2,503,097 | + | -4.7 |
Or see this region's nucleotide sequence