Experiment: m.b. Cephalothin 0.005 mg/ml
Only strains with sufficient reads to estimate fitness are shown,
but the strain fitness values are still rather noisy and may be biased towards zero.
Strains near the edge of a gene are not shown as being associated with that
gene (they are in grey).
Strains in the central 10-90% of a gene are color coded by the insertion's strand.
Usually, "+" means that the selectable marker is encoded on the forward strand,
i.e., transcribed rightward.
500 nt CA264_04965 and CA264_04970 are separated by 3 nucleotides CA264_04970 and CA264_04975 are separated by 144 nucleotides
CA264_04965: CA264_04965 - dihydrofolate synthase, at 1,153,337 to 1,154,632
_04965
CA264_04970: CA264_04970 - tRNA (guanine(46)-N(7))-methyltransferase, at 1,154,636 to 1,155,289
_04970
CA264_04975: CA264_04975 - hypothetical protein, at 1,155,434 to 1,156,057
_04975
Position (kb)
1154
1155
1156 Strain fitness (log2 ratio)
-1
0
1
2 at 1154.629 kb on - strand at 1154.798 kb on + strand, within CA264_04970 at 1154.798 kb on + strand, within CA264_04970 at 1154.798 kb on + strand, within CA264_04970 at 1154.798 kb on + strand, within CA264_04970 at 1154.799 kb on - strand, within CA264_04970 at 1154.799 kb on - strand, within CA264_04970 at 1155.055 kb on + strand, within CA264_04970 at 1155.059 kb on + strand, within CA264_04970 at 1155.059 kb on + strand, within CA264_04970 at 1155.060 kb on - strand, within CA264_04970 at 1155.060 kb on - strand, within CA264_04970 at 1155.165 kb on + strand, within CA264_04970 at 1155.165 kb on + strand, within CA264_04970 at 1155.166 kb on - strand, within CA264_04970 at 1155.166 kb on - strand, within CA264_04970 at 1155.166 kb on - strand, within CA264_04970 at 1155.166 kb on - strand, within CA264_04970 at 1155.168 kb on + strand, within CA264_04970 at 1155.168 kb on + strand, within CA264_04970 at 1155.169 kb on - strand, within CA264_04970 at 1155.169 kb on - strand, within CA264_04970 at 1155.170 kb on + strand, within CA264_04970 at 1155.170 kb on + strand, within CA264_04970 at 1155.221 kb on + strand, within CA264_04970 at 1155.221 kb on + strand, within CA264_04970 at 1155.222 kb on - strand, within CA264_04970 at 1155.223 kb on + strand, within CA264_04970 at 1155.223 kb on + strand, within CA264_04970 at 1155.224 kb on - strand at 1155.230 kb on + strand at 1155.231 kb on - strand at 1155.278 kb on + strand at 1155.285 kb on + strand at 1155.286 kb on - strand at 1155.287 kb on + strand at 1155.316 kb on - strand at 1155.394 kb on - strand at 1155.414 kb on + strand at 1155.414 kb on + strand at 1155.446 kb on + strand at 1156.049 kb on + strand at 1156.213 kb on + strand at 1156.221 kb on + strand at 1156.221 kb on + strand at 1156.222 kb on - strand at 1156.222 kb on - strand at 1156.222 kb on - strand at 1156.249 kb on - strand at 1156.288 kb on + strand at 1156.289 kb on - strand
Per-strain Table
Position Strand Gene LocusTag Fraction m.b. Cephalothin 0.005 mg/ml remove 1,154,629 - +0.7 1,154,798 + CA264_04970 0.25 +0.7 1,154,798 + CA264_04970 0.25 -0.7 1,154,798 + CA264_04970 0.25 -0.3 1,154,798 + CA264_04970 0.25 +1.9 1,154,799 - CA264_04970 0.25 -0.4 1,154,799 - CA264_04970 0.25 -1.2 1,155,055 + CA264_04970 0.64 +0.3 1,155,059 + CA264_04970 0.65 -0.3 1,155,059 + CA264_04970 0.65 -0.1 1,155,060 - CA264_04970 0.65 +0.1 1,155,060 - CA264_04970 0.65 -1.5 1,155,165 + CA264_04970 0.81 +0.4 1,155,165 + CA264_04970 0.81 +0.4 1,155,166 - CA264_04970 0.81 +0.7 1,155,166 - CA264_04970 0.81 +0.8 1,155,166 - CA264_04970 0.81 -0.8 1,155,166 - CA264_04970 0.81 -0.8 1,155,168 + CA264_04970 0.81 -0.4 1,155,168 + CA264_04970 0.81 -0.6 1,155,169 - CA264_04970 0.81 -1.3 1,155,169 - CA264_04970 0.81 +0.7 1,155,170 + CA264_04970 0.82 +1.3 1,155,170 + CA264_04970 0.82 -0.7 1,155,221 + CA264_04970 0.89 -1.1 1,155,221 + CA264_04970 0.89 +0.3 1,155,222 - CA264_04970 0.90 -0.2 1,155,223 + CA264_04970 0.90 +0.6 1,155,223 + CA264_04970 0.90 -0.9 1,155,224 - -1.7 1,155,230 + +1.5 1,155,231 - +0.5 1,155,278 + -0.6 1,155,285 + -1.0 1,155,286 - -0.8 1,155,287 + -0.8 1,155,316 - -0.2 1,155,394 - -0.9 1,155,414 + +0.5 1,155,414 + +0.2 1,155,446 + +1.0 1,156,049 + -0.1 1,156,213 + -0.4 1,156,221 + +0.9 1,156,221 + -0.0 1,156,222 - -0.5 1,156,222 - -1.0 1,156,222 - +0.2 1,156,249 - +1.2 1,156,288 + +0.1 1,156,289 - +0.2
Or see this region's nucleotide sequence