Experiment: m.b. Cephalothin 0.005 mg/ml
Only strains with sufficient reads to estimate fitness are shown,
but the strain fitness values are still rather noisy and may be biased towards zero.
Strains near the edge of a gene are not shown as being associated with that
gene (they are in grey).
Strains in the central 10-90% of a gene are color coded by the insertion's strand.
Usually, "+" means that the selectable marker is encoded on the forward strand,
i.e., transcribed rightward.
500 nt CA264_04500 and CA264_04505 are separated by 62 nucleotides CA264_04505 and CA264_04510 are separated by 79 nucleotides
CA264_04500: CA264_04500 - bacitracin ABC transporter ATP-binding protein, at 1,039,020 to 1,039,955
_04500
CA264_04505: CA264_04505 - ABC transporter permease, at 1,040,018 to 1,040,797
_04505
CA264_04510: CA264_04510 - DNA ligase (NAD(+)) LigA, at 1,040,877 to 1,042,886
_04510
Position (kb)
1040
1041
1042
1043 Strain fitness (log2 ratio)
-2
-1
0
1
2 at 1039.914 kb on - strand at 1039.979 kb on + strand at 1039.983 kb on + strand at 1039.983 kb on + strand at 1040.017 kb on + strand at 1040.018 kb on - strand at 1040.018 kb on - strand at 1040.028 kb on + strand at 1040.033 kb on + strand at 1040.033 kb on + strand at 1040.033 kb on + strand at 1040.034 kb on - strand at 1040.125 kb on + strand, within CA264_04505 at 1040.126 kb on - strand, within CA264_04505 at 1040.129 kb on + strand, within CA264_04505 at 1040.129 kb on + strand, within CA264_04505 at 1040.129 kb on + strand, within CA264_04505 at 1040.130 kb on - strand, within CA264_04505 at 1040.130 kb on - strand, within CA264_04505 at 1040.220 kb on - strand, within CA264_04505 at 1040.240 kb on - strand, within CA264_04505 at 1040.246 kb on - strand, within CA264_04505 at 1040.246 kb on - strand, within CA264_04505 at 1040.246 kb on - strand, within CA264_04505 at 1040.257 kb on - strand, within CA264_04505 at 1040.310 kb on - strand, within CA264_04505 at 1040.339 kb on + strand, within CA264_04505 at 1040.340 kb on - strand, within CA264_04505 at 1040.340 kb on - strand, within CA264_04505 at 1040.406 kb on - strand, within CA264_04505 at 1040.488 kb on + strand, within CA264_04505 at 1040.497 kb on + strand, within CA264_04505 at 1040.498 kb on - strand, within CA264_04505 at 1040.524 kb on + strand, within CA264_04505 at 1040.548 kb on + strand, within CA264_04505 at 1040.571 kb on + strand, within CA264_04505 at 1040.572 kb on - strand, within CA264_04505 at 1040.575 kb on + strand, within CA264_04505 at 1040.603 kb on - strand, within CA264_04505 at 1040.639 kb on + strand, within CA264_04505 at 1040.639 kb on + strand, within CA264_04505 at 1040.640 kb on - strand, within CA264_04505 at 1040.640 kb on - strand, within CA264_04505 at 1040.640 kb on - strand, within CA264_04505 at 1040.756 kb on - strand at 1040.756 kb on - strand at 1040.758 kb on - strand at 1040.758 kb on - strand at 1040.820 kb on - strand at 1042.854 kb on + strand at 1042.987 kb on - strand at 1042.987 kb on - strand at 1042.988 kb on + strand at 1042.988 kb on + strand at 1042.989 kb on - strand at 1042.989 kb on - strand at 1042.989 kb on - strand at 1042.989 kb on - strand at 1043.001 kb on - strand at 1043.045 kb on + strand at 1043.046 kb on - strand at 1043.052 kb on + strand at 1043.052 kb on + strand at 1043.053 kb on - strand at 1043.053 kb on - strand at 1043.053 kb on - strand at 1043.056 kb on - strand at 1043.056 kb on - strand at 1043.090 kb on + strand at 1043.091 kb on - strand at 1043.102 kb on - strand at 1043.134 kb on + strand at 1043.154 kb on + strand at 1043.157 kb on - strand at 1043.157 kb on - strand at 1043.248 kb on - strand at 1043.248 kb on - strand at 1043.298 kb on + strand at 1043.299 kb on - strand at 1043.312 kb on + strand at 1043.313 kb on - strand at 1043.319 kb on + strand at 1043.337 kb on + strand at 1043.337 kb on + strand at 1043.798 kb on + strand at 1043.799 kb on - strand at 1043.799 kb on - strand at 1043.817 kb on + strand at 1043.818 kb on - strand
Per-strain Table
Position Strand Gene LocusTag Fraction m.b. Cephalothin 0.005 mg/ml remove 1,039,914 - +0.3 1,039,979 + -0.8 1,039,983 + -1.9 1,039,983 + +0.1 1,040,017 + +0.9 1,040,018 - -1.0 1,040,018 - -0.9 1,040,028 + +0.5 1,040,033 + -0.7 1,040,033 + +0.3 1,040,033 + +0.1 1,040,034 - +0.3 1,040,125 + CA264_04505 0.14 +1.6 1,040,126 - CA264_04505 0.14 +0.1 1,040,129 + CA264_04505 0.14 +0.1 1,040,129 + CA264_04505 0.14 +0.0 1,040,129 + CA264_04505 0.14 +0.1 1,040,130 - CA264_04505 0.14 -0.2 1,040,130 - CA264_04505 0.14 +0.2 1,040,220 - CA264_04505 0.26 -0.4 1,040,240 - CA264_04505 0.28 -0.3 1,040,246 - CA264_04505 0.29 +0.6 1,040,246 - CA264_04505 0.29 -0.5 1,040,246 - CA264_04505 0.29 +0.5 1,040,257 - CA264_04505 0.31 -1.9 1,040,310 - CA264_04505 0.37 +1.4 1,040,339 + CA264_04505 0.41 -0.4 1,040,340 - CA264_04505 0.41 -0.9 1,040,340 - CA264_04505 0.41 -0.4 1,040,406 - CA264_04505 0.50 -1.0 1,040,488 + CA264_04505 0.60 -0.7 1,040,497 + CA264_04505 0.61 -0.8 1,040,498 - CA264_04505 0.62 -0.5 1,040,524 + CA264_04505 0.65 -1.1 1,040,548 + CA264_04505 0.68 +0.4 1,040,571 + CA264_04505 0.71 -0.7 1,040,572 - CA264_04505 0.71 +1.1 1,040,575 + CA264_04505 0.71 +0.3 1,040,603 - CA264_04505 0.75 +1.8 1,040,639 + CA264_04505 0.80 -0.0 1,040,639 + CA264_04505 0.80 -2.7 1,040,640 - CA264_04505 0.80 -0.2 1,040,640 - CA264_04505 0.80 -0.5 1,040,640 - CA264_04505 0.80 +0.0 1,040,756 - -0.3 1,040,756 - -0.1 1,040,758 - +0.1 1,040,758 - -0.2 1,040,820 - +1.5 1,042,854 + +0.1 1,042,987 - +0.4 1,042,987 - +0.2 1,042,988 + -1.7 1,042,988 + -0.8 1,042,989 - -0.4 1,042,989 - +0.2 1,042,989 - -1.3 1,042,989 - +0.1 1,043,001 - -0.8 1,043,045 + +1.7 1,043,046 - -0.2 1,043,052 + -0.1 1,043,052 + -1.4 1,043,053 - +1.0 1,043,053 - -0.8 1,043,053 - -0.4 1,043,056 - +0.5 1,043,056 - -0.2 1,043,090 + +0.0 1,043,091 - +0.4 1,043,102 - -0.2 1,043,134 + -0.1 1,043,154 + +0.0 1,043,157 - +0.8 1,043,157 - +0.1 1,043,248 - +1.5 1,043,248 - +0.1 1,043,298 + -0.1 1,043,299 - +1.6 1,043,312 + +0.8 1,043,313 - -0.4 1,043,319 + +0.2 1,043,337 + -0.2 1,043,337 + +0.0 1,043,798 + +0.4 1,043,799 - -0.1 1,043,799 - -0.4 1,043,817 + +1.5 1,043,818 - -0.3
Or see this region's nucleotide sequence