Experiment: m.b. Cephalothin 0.005 mg/ml
Only strains with sufficient reads to estimate fitness are shown,
but the strain fitness values are still rather noisy and may be biased towards zero.
Strains near the edge of a gene are not shown as being associated with that
gene (they are in grey).
Strains in the central 10-90% of a gene are color coded by the insertion's strand.
Usually, "+" means that the selectable marker is encoded on the forward strand,
i.e., transcribed rightward.
500 nt CA264_03760 and CA264_03765 are separated by 91 nucleotides CA264_03765 and CA264_03770 are separated by 178 nucleotides CA264_03770 and CA264_03775 are separated by 153 nucleotides
CA264_03760: CA264_03760 - hypothetical protein, at 883,267 to 883,659
_03760
CA264_03765: CA264_03765 - tRNA-Glu, at 883,751 to 883,825
_03765
CA264_03770: CA264_03770 - type I glyceraldehyde-3-phosphate dehydrogenase, at 884,004 to 884,996
_03770
CA264_03775: CA264_03775 - hypothetical protein, at 885,150 to 886,034
_03775
Position (kb) 884
885 Strain fitness (log2 ratio) -6
-5
-4
-3
-2
-1
0
1
2 at 883.021 kb on - strand at 883.024 kb on + strand at 883.044 kb on + strand at 883.045 kb on - strand at 883.045 kb on - strand at 883.045 kb on - strand at 883.048 kb on + strand at 883.105 kb on - strand at 883.107 kb on - strand at 883.169 kb on + strand at 883.210 kb on + strand at 883.261 kb on + strand at 883.261 kb on + strand at 883.294 kb on + strand at 883.294 kb on + strand at 883.296 kb on + strand at 883.302 kb on + strand at 883.323 kb on + strand, within CA264_03760 at 883.343 kb on + strand, within CA264_03760 at 883.343 kb on + strand, within CA264_03760 at 883.344 kb on - strand, within CA264_03760 at 883.372 kb on + strand, within CA264_03760 at 883.372 kb on + strand, within CA264_03760 at 883.373 kb on - strand, within CA264_03760 at 883.394 kb on - strand, within CA264_03760 at 883.409 kb on + strand, within CA264_03760 at 883.410 kb on - strand, within CA264_03760 at 883.410 kb on - strand, within CA264_03760 at 883.414 kb on + strand, within CA264_03760 at 883.439 kb on - strand, within CA264_03760 at 883.516 kb on - strand, within CA264_03760 at 883.517 kb on + strand, within CA264_03760 at 883.517 kb on + strand, within CA264_03760 at 883.517 kb on + strand, within CA264_03760 at 883.517 kb on + strand, within CA264_03760 at 883.518 kb on - strand, within CA264_03760 at 883.564 kb on - strand, within CA264_03760 at 883.589 kb on - strand, within CA264_03760 at 883.658 kb on - strand at 883.665 kb on - strand at 883.672 kb on - strand at 883.672 kb on - strand at 883.888 kb on + strand at 883.912 kb on + strand at 883.951 kb on + strand at 883.952 kb on - strand at 883.956 kb on + strand at 883.956 kb on + strand at 883.957 kb on - strand at 885.068 kb on + strand at 885.087 kb on + strand at 885.104 kb on + strand at 885.104 kb on + strand at 885.104 kb on + strand at 885.105 kb on - strand at 885.106 kb on + strand at 885.106 kb on + strand at 885.107 kb on - strand at 885.107 kb on - strand at 885.107 kb on - strand at 885.140 kb on + strand at 885.167 kb on + strand at 885.196 kb on + strand at 885.309 kb on + strand, within CA264_03775 at 885.370 kb on + strand, within CA264_03775 at 885.681 kb on - strand, within CA264_03775 at 885.752 kb on - strand, within CA264_03775 at 885.752 kb on - strand, within CA264_03775 at 885.752 kb on - strand, within CA264_03775 at 885.755 kb on - strand, within CA264_03775 at 885.755 kb on - strand, within CA264_03775 at 885.755 kb on - strand, within CA264_03775 at 885.756 kb on + strand, within CA264_03775 at 885.756 kb on + strand, within CA264_03775 at 885.757 kb on - strand, within CA264_03775 at 885.757 kb on - strand, within CA264_03775 at 885.757 kb on - strand, within CA264_03775 at 885.757 kb on - strand, within CA264_03775 at 885.765 kb on - strand, within CA264_03775 at 885.829 kb on - strand, within CA264_03775 at 885.843 kb on + strand, within CA264_03775 at 885.843 kb on + strand, within CA264_03775 at 885.843 kb on + strand, within CA264_03775 at 885.844 kb on - strand, within CA264_03775 at 885.844 kb on - strand, within CA264_03775 at 885.844 kb on - strand, within CA264_03775 at 885.845 kb on + strand, within CA264_03775 at 885.845 kb on + strand, within CA264_03775 at 885.962 kb on - strand
Per-strain Table
Position Strand Gene LocusTag Fraction m.b. Cephalothin 0.005 mg/ml remove 883,021 - -1.9 883,024 + -3.4 883,044 + -1.2 883,045 - -3.1 883,045 - -3.0 883,045 - -0.8 883,048 + -5.0 883,105 - -3.2 883,107 - -6.2 883,169 + -3.6 883,210 + -2.9 883,261 + -1.1 883,261 + -2.2 883,294 + -2.9 883,294 + -4.2 883,296 + -1.6 883,302 + -2.1 883,323 + CA264_03760 0.14 -4.3 883,343 + CA264_03760 0.19 -2.9 883,343 + CA264_03760 0.19 -2.0 883,344 - CA264_03760 0.20 -5.6 883,372 + CA264_03760 0.27 -0.8 883,372 + CA264_03760 0.27 -3.6 883,373 - CA264_03760 0.27 -3.5 883,394 - CA264_03760 0.32 -1.6 883,409 + CA264_03760 0.36 -1.1 883,410 - CA264_03760 0.36 -3.5 883,410 - CA264_03760 0.36 -0.8 883,414 + CA264_03760 0.37 -0.6 883,439 - CA264_03760 0.44 -2.1 883,516 - CA264_03760 0.63 -3.5 883,517 + CA264_03760 0.64 -1.8 883,517 + CA264_03760 0.64 -2.0 883,517 + CA264_03760 0.64 -2.8 883,517 + CA264_03760 0.64 -1.9 883,518 - CA264_03760 0.64 -3.6 883,564 - CA264_03760 0.76 -5.4 883,589 - CA264_03760 0.82 -1.7 883,658 - -3.5 883,665 - -1.9 883,672 - -2.4 883,672 - -1.9 883,888 + +0.1 883,912 + +0.2 883,951 + +0.8 883,952 - +0.5 883,956 + +0.3 883,956 + +0.5 883,957 - -0.1 885,068 + +0.2 885,087 + -0.7 885,104 + -0.6 885,104 + -0.5 885,104 + -0.0 885,105 - -0.5 885,106 + -0.8 885,106 + +0.7 885,107 - -0.5 885,107 - -0.5 885,107 - -0.8 885,140 + +0.9 885,167 + -0.5 885,196 + -1.2 885,309 + CA264_03775 0.18 +1.7 885,370 + CA264_03775 0.25 +0.2 885,681 - CA264_03775 0.60 +0.7 885,752 - CA264_03775 0.68 -0.1 885,752 - CA264_03775 0.68 +0.4 885,752 - CA264_03775 0.68 +1.8 885,755 - CA264_03775 0.68 +0.7 885,755 - CA264_03775 0.68 +0.5 885,755 - CA264_03775 0.68 +0.1 885,756 + CA264_03775 0.68 +1.4 885,756 + CA264_03775 0.68 +0.2 885,757 - CA264_03775 0.69 -0.6 885,757 - CA264_03775 0.69 -0.8 885,757 - CA264_03775 0.69 -0.5 885,757 - CA264_03775 0.69 +0.8 885,765 - CA264_03775 0.69 +0.3 885,829 - CA264_03775 0.77 -0.5 885,843 + CA264_03775 0.78 -0.1 885,843 + CA264_03775 0.78 -0.5 885,843 + CA264_03775 0.78 -0.0 885,844 - CA264_03775 0.78 +1.4 885,844 - CA264_03775 0.78 +1.0 885,844 - CA264_03775 0.78 -0.1 885,845 + CA264_03775 0.79 -0.1 885,845 + CA264_03775 0.79 +1.2 885,962 - -0.7
Or see this region's nucleotide sequence