Experiment: m.b. Cephalothin 0.005 mg/ml
Only strains with sufficient reads to estimate fitness are shown,
but the strain fitness values are still rather noisy and may be biased towards zero.
Strains near the edge of a gene are not shown as being associated with that
gene (they are in grey).
Strains in the central 10-90% of a gene are color coded by the insertion's strand.
Usually, "+" means that the selectable marker is encoded on the forward strand,
i.e., transcribed rightward.
500 nt CA264_03385 and CA264_03390 are separated by 247 nucleotides CA264_03390 and CA264_03395 are separated by 122 nucleotides CA264_03395 and CA264_03400 are separated by 237 nucleotides CA264_03400 and CA264_03405 overlap by 4 nucleotides
CA264_03385: CA264_03385 - hypothetical protein, at 791,454 to 791,675
_03385
CA264_03390: CA264_03390 - hypothetical protein, at 791,923 to 792,291
_03390
CA264_03395: CA264_03395 - phospholipase, at 792,414 to 793,115
_03395
CA264_03400: CA264_03400 - hypothetical protein, at 793,353 to 793,886
_03400
CA264_03405: CA264_03405 - hypothetical protein, at 793,883 to 794,497
_03405
Position (kb) 792
793
794 Strain fitness (log2 ratio) -1
0
1
2
3 at 791.439 kb on + strand at 791.439 kb on + strand at 791.444 kb on + strand at 791.613 kb on + strand, within CA264_03385 at 791.614 kb on - strand, within CA264_03385 at 791.618 kb on + strand, within CA264_03385 at 791.619 kb on - strand, within CA264_03385 at 791.675 kb on + strand at 791.691 kb on + strand at 791.714 kb on + strand at 791.714 kb on + strand at 791.715 kb on - strand at 791.813 kb on + strand at 791.858 kb on + strand at 791.859 kb on - strand at 791.869 kb on + strand at 791.875 kb on + strand at 791.876 kb on - strand at 791.922 kb on + strand at 791.965 kb on - strand, within CA264_03390 at 792.031 kb on - strand, within CA264_03390 at 792.203 kb on - strand, within CA264_03390 at 792.287 kb on - strand at 792.290 kb on - strand at 792.298 kb on + strand at 792.298 kb on + strand at 792.301 kb on - strand at 792.378 kb on + strand at 792.382 kb on + strand at 792.383 kb on - strand at 792.383 kb on - strand at 792.435 kb on + strand at 792.436 kb on - strand at 792.436 kb on - strand at 792.436 kb on - strand at 792.544 kb on - strand, within CA264_03395 at 792.693 kb on + strand, within CA264_03395 at 792.707 kb on + strand, within CA264_03395 at 792.707 kb on + strand, within CA264_03395 at 792.742 kb on - strand, within CA264_03395 at 792.742 kb on - strand, within CA264_03395 at 792.777 kb on + strand, within CA264_03395 at 792.832 kb on - strand, within CA264_03395 at 792.869 kb on + strand, within CA264_03395 at 792.869 kb on + strand, within CA264_03395 at 792.903 kb on + strand, within CA264_03395 at 792.904 kb on - strand, within CA264_03395 at 792.939 kb on - strand, within CA264_03395 at 792.983 kb on + strand, within CA264_03395 at 793.028 kb on - strand, within CA264_03395 at 793.028 kb on - strand, within CA264_03395 at 793.032 kb on + strand, within CA264_03395 at 793.032 kb on + strand, within CA264_03395 at 793.033 kb on - strand, within CA264_03395 at 793.035 kb on - strand, within CA264_03395 at 793.079 kb on + strand at 793.113 kb on + strand at 793.194 kb on + strand at 793.195 kb on - strand at 793.195 kb on - strand at 793.195 kb on - strand at 793.195 kb on - strand at 793.196 kb on + strand at 793.196 kb on + strand at 793.197 kb on - strand at 793.197 kb on - strand at 793.292 kb on + strand at 793.352 kb on + strand at 793.365 kb on - strand at 793.389 kb on + strand at 793.390 kb on - strand at 793.397 kb on - strand at 793.397 kb on - strand at 793.440 kb on + strand, within CA264_03400 at 793.450 kb on - strand, within CA264_03400 at 793.483 kb on + strand, within CA264_03400 at 793.487 kb on - strand, within CA264_03400 at 793.557 kb on + strand, within CA264_03400 at 793.557 kb on + strand, within CA264_03400 at 793.558 kb on - strand, within CA264_03400 at 793.558 kb on - strand, within CA264_03400 at 793.563 kb on + strand, within CA264_03400 at 793.668 kb on - strand, within CA264_03400 at 793.844 kb on - strand at 793.892 kb on - strand at 793.903 kb on + strand at 793.904 kb on - strand at 793.906 kb on - strand at 793.929 kb on - strand at 793.968 kb on + strand, within CA264_03405
Per-strain Table
Position Strand Gene LocusTag Fraction m.b. Cephalothin 0.005 mg/ml remove 791,439 + +0.5 791,439 + -0.2 791,444 + +0.5 791,613 + CA264_03385 0.72 -1.5 791,614 - CA264_03385 0.72 -0.5 791,618 + CA264_03385 0.74 +0.2 791,619 - CA264_03385 0.74 -0.2 791,675 + +0.2 791,691 + -0.9 791,714 + -0.2 791,714 + -0.7 791,715 - -1.5 791,813 + +0.7 791,858 + -1.0 791,859 - -0.2 791,869 + -0.3 791,875 + +0.1 791,876 - +0.2 791,922 + +0.1 791,965 - CA264_03390 0.11 -0.1 792,031 - CA264_03390 0.29 -0.3 792,203 - CA264_03390 0.76 -1.6 792,287 - -0.7 792,290 - +2.8 792,298 + -0.1 792,298 + +1.8 792,301 - -0.4 792,378 + +2.2 792,382 + -0.1 792,383 - +1.1 792,383 - -0.9 792,435 + -1.1 792,436 - -1.3 792,436 - -1.6 792,436 - -0.2 792,544 - CA264_03395 0.19 -0.5 792,693 + CA264_03395 0.40 +0.9 792,707 + CA264_03395 0.42 +1.1 792,707 + CA264_03395 0.42 +0.0 792,742 - CA264_03395 0.47 -0.8 792,742 - CA264_03395 0.47 +0.3 792,777 + CA264_03395 0.52 -0.3 792,832 - CA264_03395 0.60 +1.0 792,869 + CA264_03395 0.65 -0.4 792,869 + CA264_03395 0.65 +0.0 792,903 + CA264_03395 0.70 +0.0 792,904 - CA264_03395 0.70 -0.7 792,939 - CA264_03395 0.75 +1.4 792,983 + CA264_03395 0.81 +1.0 793,028 - CA264_03395 0.87 -0.3 793,028 - CA264_03395 0.87 +0.7 793,032 + CA264_03395 0.88 -0.9 793,032 + CA264_03395 0.88 +0.3 793,033 - CA264_03395 0.88 +0.3 793,035 - CA264_03395 0.88 -0.2 793,079 + -0.9 793,113 + -1.4 793,194 + +1.3 793,195 - -0.0 793,195 - -0.2 793,195 - -0.3 793,195 - -0.0 793,196 + +0.2 793,196 + -0.7 793,197 - -0.9 793,197 - -0.2 793,292 + +1.0 793,352 + -0.1 793,365 - +0.4 793,389 + -0.8 793,390 - +0.7 793,397 - +0.1 793,397 - -0.4 793,440 + CA264_03400 0.16 +0.0 793,450 - CA264_03400 0.18 +0.2 793,483 + CA264_03400 0.24 -0.3 793,487 - CA264_03400 0.25 -0.2 793,557 + CA264_03400 0.38 +0.1 793,557 + CA264_03400 0.38 +2.8 793,558 - CA264_03400 0.38 +0.4 793,558 - CA264_03400 0.38 +0.5 793,563 + CA264_03400 0.39 -0.1 793,668 - CA264_03400 0.59 -0.1 793,844 - -0.5 793,892 - -0.4 793,903 + -0.9 793,904 - +0.2 793,906 - -1.1 793,929 - +0.6 793,968 + CA264_03405 0.14 -0.0
Or see this region's nucleotide sequence