Strain Fitness in Pontibacter actiniarum KMM 6156, DSM 19842 around CA264_01745

Experiment: m.b. Cephalothin 0.005 mg/ml

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Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

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500 ntCA264_01740 and CA264_01745 are separated by 8 nucleotidesCA264_01745 and CA264_01750 are separated by 750 nucleotides CA264_01740: CA264_01740 - proton-translocating NADH-quinone oxidoreductase subunit N, at 407,106 to 408,611 _01740 CA264_01745: CA264_01745 - amidophosphoribosyltransferase, at 408,620 to 410,515 _01745 CA264_01750: CA264_01750 - hypothetical protein, at 411,266 to 412,213 _01750 Position (kb) 408 409 410 411Strain fitness (log2 ratio) -3 -2 -1 0 1 2at 407.629 kb on - strand, within CA264_01740at 408.082 kb on + strand, within CA264_01740at 408.114 kb on + strand, within CA264_01740at 408.450 kb on + strand, within CA264_01740at 408.584 kb on - strandat 408.607 kb on + strandat 408.607 kb on + strandat 408.615 kb on + strandat 408.615 kb on + strandat 408.615 kb on + strandat 408.633 kb on + strandat 408.649 kb on + strandat 408.649 kb on + strandat 408.683 kb on + strandat 408.698 kb on + strandat 408.699 kb on - strandat 408.713 kb on + strandat 408.714 kb on - strandat 408.819 kb on - strand, within CA264_01745at 408.887 kb on + strand, within CA264_01745at 408.887 kb on + strand, within CA264_01745at 408.887 kb on + strand, within CA264_01745at 408.887 kb on + strand, within CA264_01745at 408.888 kb on - strand, within CA264_01745at 408.888 kb on - strand, within CA264_01745at 408.889 kb on + strand, within CA264_01745at 408.890 kb on - strand, within CA264_01745at 408.972 kb on - strand, within CA264_01745at 408.972 kb on - strand, within CA264_01745at 408.989 kb on + strand, within CA264_01745at 409.019 kb on - strand, within CA264_01745at 409.162 kb on + strand, within CA264_01745at 409.220 kb on + strand, within CA264_01745at 409.223 kb on + strand, within CA264_01745at 409.240 kb on + strand, within CA264_01745at 409.240 kb on + strand, within CA264_01745at 409.241 kb on - strand, within CA264_01745at 409.329 kb on - strand, within CA264_01745at 409.401 kb on - strand, within CA264_01745at 409.404 kb on - strand, within CA264_01745at 409.406 kb on + strand, within CA264_01745at 409.406 kb on + strand, within CA264_01745at 409.475 kb on + strand, within CA264_01745at 409.495 kb on + strand, within CA264_01745at 409.713 kb on - strand, within CA264_01745at 409.713 kb on - strand, within CA264_01745at 409.713 kb on - strand, within CA264_01745at 409.713 kb on - strand, within CA264_01745at 409.769 kb on + strand, within CA264_01745at 409.839 kb on + strand, within CA264_01745at 409.897 kb on + strand, within CA264_01745at 409.898 kb on - strand, within CA264_01745at 409.901 kb on - strand, within CA264_01745at 409.952 kb on + strand, within CA264_01745at 409.953 kb on - strand, within CA264_01745at 409.953 kb on - strand, within CA264_01745at 409.953 kb on - strand, within CA264_01745at 409.959 kb on + strand, within CA264_01745at 410.003 kb on - strand, within CA264_01745at 410.039 kb on - strand, within CA264_01745at 410.039 kb on - strand, within CA264_01745at 410.039 kb on - strand, within CA264_01745at 410.125 kb on + strand, within CA264_01745at 410.125 kb on + strand, within CA264_01745at 410.125 kb on + strand, within CA264_01745at 410.126 kb on - strand, within CA264_01745at 410.126 kb on - strand, within CA264_01745at 410.197 kb on + strand, within CA264_01745at 410.213 kb on + strand, within CA264_01745at 410.213 kb on + strand, within CA264_01745at 410.264 kb on + strand, within CA264_01745at 410.264 kb on + strand, within CA264_01745at 410.264 kb on + strand, within CA264_01745at 410.264 kb on + strand, within CA264_01745at 410.264 kb on + strand, within CA264_01745at 410.279 kb on + strand, within CA264_01745at 410.367 kb on - strandat 410.367 kb on - strandat 410.436 kb on - strandat 410.461 kb on - strandat 410.461 kb on - strandat 410.513 kb on + strandat 410.514 kb on - strandat 410.514 kb on - strandat 410.586 kb on + strandat 410.587 kb on - strandat 410.607 kb on + strandat 410.610 kb on + strandat 410.610 kb on + strandat 410.695 kb on + strandat 410.699 kb on + strandat 410.700 kb on - strandat 410.755 kb on - strandat 410.861 kb on + strandat 410.862 kb on - strandat 410.862 kb on - strandat 410.863 kb on + strandat 410.863 kb on + strandat 410.902 kb on + strandat 410.902 kb on + strandat 410.912 kb on - strandat 411.147 kb on + strandat 411.150 kb on + strandat 411.174 kb on + strandat 411.184 kb on + strandat 411.221 kb on + strandat 411.221 kb on + strandat 411.226 kb on - strandat 411.227 kb on + strandat 411.227 kb on + strandat 411.227 kb on + strandat 411.228 kb on - strandat 411.228 kb on - strandat 411.235 kb on - strandat 411.236 kb on + strandat 411.236 kb on + strandat 411.237 kb on - strandat 411.253 kb on + strandat 411.253 kb on + strandat 411.253 kb on + strandat 411.254 kb on - strandat 411.272 kb on + strandat 411.317 kb on + strandat 411.317 kb on + strandat 411.319 kb on + strandat 411.319 kb on + strandat 411.320 kb on - strandat 411.320 kb on - strandat 411.320 kb on - strandat 411.330 kb on + strandat 411.428 kb on + strand, within CA264_01750at 411.428 kb on + strand, within CA264_01750at 411.486 kb on - strand, within CA264_01750at 411.486 kb on - strand, within CA264_01750at 411.515 kb on + strand, within CA264_01750

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Per-strain Table

Position Strand Gene LocusTag Fraction m.b. Cephalothin 0.005 mg/ml
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407,629 - CA264_01740 0.35 -2.3
408,082 + CA264_01740 0.65 -0.6
408,114 + CA264_01740 0.67 -1.4
408,450 + CA264_01740 0.89 -1.0
408,584 - -1.2
408,607 + -0.7
408,607 + -0.0
408,615 + -0.0
408,615 + +0.9
408,615 + +0.2
408,633 + -1.2
408,649 + -1.1
408,649 + -0.5
408,683 + -0.5
408,698 + +0.0
408,699 - -1.3
408,713 + -0.4
408,714 - +1.3
408,819 - CA264_01745 0.10 -0.6
408,887 + CA264_01745 0.14 -0.9
408,887 + CA264_01745 0.14 +2.2
408,887 + CA264_01745 0.14 +2.2
408,887 + CA264_01745 0.14 -0.6
408,888 - CA264_01745 0.14 +0.7
408,888 - CA264_01745 0.14 -0.0
408,889 + CA264_01745 0.14 -0.2
408,890 - CA264_01745 0.14 +0.8
408,972 - CA264_01745 0.19 -0.7
408,972 - CA264_01745 0.19 -1.0
408,989 + CA264_01745 0.19 +0.6
409,019 - CA264_01745 0.21 +0.5
409,162 + CA264_01745 0.29 -0.2
409,220 + CA264_01745 0.32 -0.4
409,223 + CA264_01745 0.32 -1.5
409,240 + CA264_01745 0.33 -0.5
409,240 + CA264_01745 0.33 -1.3
409,241 - CA264_01745 0.33 -0.2
409,329 - CA264_01745 0.37 -0.1
409,401 - CA264_01745 0.41 -0.4
409,404 - CA264_01745 0.41 -0.4
409,406 + CA264_01745 0.41 -0.3
409,406 + CA264_01745 0.41 -0.6
409,475 + CA264_01745 0.45 -0.4
409,495 + CA264_01745 0.46 -1.7
409,713 - CA264_01745 0.58 +0.6
409,713 - CA264_01745 0.58 -0.6
409,713 - CA264_01745 0.58 -0.1
409,713 - CA264_01745 0.58 -1.4
409,769 + CA264_01745 0.61 -0.7
409,839 + CA264_01745 0.64 -0.5
409,897 + CA264_01745 0.67 +0.7
409,898 - CA264_01745 0.67 +0.8
409,901 - CA264_01745 0.68 -0.1
409,952 + CA264_01745 0.70 +0.1
409,953 - CA264_01745 0.70 -1.0
409,953 - CA264_01745 0.70 -0.0
409,953 - CA264_01745 0.70 +0.1
409,959 + CA264_01745 0.71 -0.8
410,003 - CA264_01745 0.73 -0.6
410,039 - CA264_01745 0.75 -0.4
410,039 - CA264_01745 0.75 -0.7
410,039 - CA264_01745 0.75 -0.8
410,125 + CA264_01745 0.79 -0.1
410,125 + CA264_01745 0.79 -0.3
410,125 + CA264_01745 0.79 +0.6
410,126 - CA264_01745 0.79 -1.1
410,126 - CA264_01745 0.79 +0.4
410,197 + CA264_01745 0.83 -1.5
410,213 + CA264_01745 0.84 +0.0
410,213 + CA264_01745 0.84 -0.6
410,264 + CA264_01745 0.87 -1.2
410,264 + CA264_01745 0.87 -0.6
410,264 + CA264_01745 0.87 -0.6
410,264 + CA264_01745 0.87 -0.4
410,264 + CA264_01745 0.87 +1.6
410,279 + CA264_01745 0.88 -0.4
410,367 - +0.1
410,367 - -0.6
410,436 - +0.8
410,461 - -0.4
410,461 - -0.4
410,513 + +1.4
410,514 - -0.8
410,514 - +0.1
410,586 + -0.5
410,587 - +0.2
410,607 + +0.1
410,610 + -0.7
410,610 + -0.2
410,695 + -0.1
410,699 + -0.3
410,700 - -0.2
410,755 - -1.3
410,861 + +0.7
410,862 - -0.2
410,862 - +0.0
410,863 + +1.2
410,863 + -0.1
410,902 + -0.2
410,902 + -0.4
410,912 - +0.0
411,147 + -1.6
411,150 + +0.4
411,174 + +0.2
411,184 + -0.7
411,221 + +0.0
411,221 + -0.3
411,226 - -0.1
411,227 + +0.4
411,227 + -0.1
411,227 + -2.8
411,228 - +0.5
411,228 - +0.4
411,235 - +0.5
411,236 + +1.6
411,236 + -0.6
411,237 - -0.5
411,253 + +0.5
411,253 + -0.8
411,253 + -0.2
411,254 - +0.2
411,272 + +0.1
411,317 + +1.3
411,317 + +0.8
411,319 + +0.4
411,319 + +0.9
411,320 - +0.3
411,320 - -0.0
411,320 - +0.6
411,330 + -0.5
411,428 + CA264_01750 0.17 -0.1
411,428 + CA264_01750 0.17 -0.8
411,486 - CA264_01750 0.23 -0.2
411,486 - CA264_01750 0.23 +0.7
411,515 + CA264_01750 0.26 -0.5

Or see this region's nucleotide sequence