Experiment: m.b. Cephalothin 0.005 mg/ml
Only strains with sufficient reads to estimate fitness are shown,
but the strain fitness values are still rather noisy and may be biased towards zero.
Strains near the edge of a gene are not shown as being associated with that
gene (they are in grey).
Strains in the central 10-90% of a gene are color coded by the insertion's strand.
Usually, "+" means that the selectable marker is encoded on the forward strand,
i.e., transcribed rightward.
500 nt CA264_00715 and CA264_00720 are separated by 195 nucleotides CA264_00720 and CA264_00725 are separated by 391 nucleotides
CA264_00715: CA264_00715 - hypothetical protein, at 154,645 to 155,742
_00715
CA264_00720: CA264_00720 - 30S ribosomal protein S20, at 155,938 to 156,195
_00720
CA264_00725: CA264_00725 - pyruvate kinase, at 156,587 to 158,014
_00725
Position (kb)
155
156
157 Strain fitness (log2 ratio)
-1
0
1
2
3 at 154.977 kb on + strand, within CA264_00715 at 155.097 kb on + strand, within CA264_00715 at 155.142 kb on - strand, within CA264_00715 at 155.150 kb on + strand, within CA264_00715 at 155.169 kb on + strand, within CA264_00715 at 155.170 kb on - strand, within CA264_00715 at 155.204 kb on - strand, within CA264_00715 at 155.308 kb on + strand, within CA264_00715 at 155.319 kb on + strand, within CA264_00715 at 155.320 kb on - strand, within CA264_00715 at 155.320 kb on - strand, within CA264_00715 at 155.598 kb on + strand, within CA264_00715 at 155.598 kb on + strand, within CA264_00715 at 155.598 kb on + strand, within CA264_00715 at 155.659 kb on + strand at 155.727 kb on - strand at 155.730 kb on + strand at 155.743 kb on - strand at 155.788 kb on - strand at 155.822 kb on + strand at 155.822 kb on + strand at 155.823 kb on - strand at 156.193 kb on + strand at 156.230 kb on + strand at 156.277 kb on + strand at 156.283 kb on + strand at 156.284 kb on - strand at 156.330 kb on + strand at 156.401 kb on - strand at 156.413 kb on + strand at 156.414 kb on - strand at 156.414 kb on - strand at 156.417 kb on + strand at 156.418 kb on - strand at 156.424 kb on + strand at 156.506 kb on - strand at 156.516 kb on - strand at 156.519 kb on - strand at 156.520 kb on + strand at 156.521 kb on - strand at 156.521 kb on - strand at 156.564 kb on + strand at 156.569 kb on + strand at 156.570 kb on - strand at 156.570 kb on - strand at 156.570 kb on - strand at 156.599 kb on + strand at 156.599 kb on + strand at 156.600 kb on - strand at 156.673 kb on + strand at 156.673 kb on + strand at 156.674 kb on - strand at 156.679 kb on - strand at 156.949 kb on + strand, within CA264_00725 at 156.987 kb on - strand, within CA264_00725 at 157.005 kb on - strand, within CA264_00725
Per-strain Table
Position Strand Gene LocusTag Fraction m.b. Cephalothin 0.005 mg/ml remove 154,977 + CA264_00715 0.30 -0.4 155,097 + CA264_00715 0.41 +0.3 155,142 - CA264_00715 0.45 +0.1 155,150 + CA264_00715 0.46 -1.6 155,169 + CA264_00715 0.48 -0.9 155,170 - CA264_00715 0.48 +0.3 155,204 - CA264_00715 0.51 -0.3 155,308 + CA264_00715 0.60 -0.4 155,319 + CA264_00715 0.61 -1.4 155,320 - CA264_00715 0.61 +0.5 155,320 - CA264_00715 0.61 +0.4 155,598 + CA264_00715 0.87 -0.2 155,598 + CA264_00715 0.87 -0.3 155,598 + CA264_00715 0.87 +0.2 155,659 + -0.5 155,727 - -0.5 155,730 + -0.9 155,743 - -0.4 155,788 - +0.6 155,822 + -0.3 155,822 + -0.4 155,823 - +0.0 156,193 + +0.3 156,230 + +1.5 156,277 + +0.5 156,283 + +0.2 156,284 - +0.5 156,330 + +0.7 156,401 - +1.6 156,413 + +0.9 156,414 - +1.7 156,414 - +1.5 156,417 + +1.0 156,418 - +2.7 156,424 + +1.4 156,506 - +1.3 156,516 - +1.7 156,519 - +1.5 156,520 + +0.9 156,521 - +1.6 156,521 - +1.3 156,564 + +1.4 156,569 + +1.8 156,570 - +1.0 156,570 - +1.2 156,570 - +1.5 156,599 + +2.1 156,599 + +1.5 156,600 - +3.7 156,673 + +1.0 156,673 + +1.7 156,674 - +2.7 156,679 - +2.7 156,949 + CA264_00725 0.25 +1.3 156,987 - CA264_00725 0.28 +1.6 157,005 - CA264_00725 0.29 +0.8
Or see this region's nucleotide sequence