Experiment: m.b. Cephalothin 0.005 mg/ml
Only strains with sufficient reads to estimate fitness are shown,
but the strain fitness values are still rather noisy and may be biased towards zero.
Strains near the edge of a gene are not shown as being associated with that
gene (they are in grey).
Strains in the central 10-90% of a gene are color coded by the insertion's strand.
Usually, "+" means that the selectable marker is encoded on the forward strand,
i.e., transcribed rightward.
500 nt CA264_00440 and CA264_00445 are separated by 710 nucleotides CA264_00445 and CA264_00450 are separated by 153 nucleotides CA264_00450 and CA264_00455 overlap by 52 nucleotides
CA264_00440: CA264_00440 - YihA family ribosome biogenesis GTP-binding protein, at 94,208 to 94,816
_00440
CA264_00445: CA264_00445 - hypothetical protein, at 95,527 to 97,518
_00445
CA264_00450: CA264_00450 - bifunctional demethylmenaquinone methyltransferase/2-methoxy-6-polyprenyl-1,4-benzoquinol methylase, at 97,672 to 98,394
_00450
CA264_00455: CA264_00455 - PorT-like protein, at 98,343 to 99,113
_00455
Position (kb) 95
96
97
98 Strain fitness (log2 ratio) -3
-2
-1
0
1
2 at 94.808 kb on + strand at 94.808 kb on + strand at 94.919 kb on + strand at 94.926 kb on + strand at 94.947 kb on + strand at 94.948 kb on - strand at 94.971 kb on + strand at 94.972 kb on - strand at 94.974 kb on - strand at 94.977 kb on + strand at 94.977 kb on + strand at 94.977 kb on + strand at 94.978 kb on - strand at 94.978 kb on - strand at 95.075 kb on + strand at 95.076 kb on - strand at 95.177 kb on - strand at 95.180 kb on + strand at 95.181 kb on - strand at 95.226 kb on - strand at 95.256 kb on - strand at 95.291 kb on - strand at 95.310 kb on + strand at 95.401 kb on + strand at 95.401 kb on + strand at 95.402 kb on - strand at 95.402 kb on - strand at 95.402 kb on - strand at 95.412 kb on + strand at 95.424 kb on + strand at 95.510 kb on - strand at 95.534 kb on - strand at 95.624 kb on + strand at 95.625 kb on - strand at 95.662 kb on + strand at 95.663 kb on - strand at 95.683 kb on + strand at 95.684 kb on - strand at 95.684 kb on - strand at 95.684 kb on - strand at 95.694 kb on - strand at 95.694 kb on - strand at 95.729 kb on - strand, within CA264_00445 at 95.731 kb on + strand, within CA264_00445 at 95.731 kb on + strand, within CA264_00445 at 95.731 kb on + strand, within CA264_00445 at 95.743 kb on - strand, within CA264_00445 at 95.743 kb on - strand, within CA264_00445 at 95.779 kb on + strand, within CA264_00445 at 95.831 kb on - strand, within CA264_00445 at 95.959 kb on + strand, within CA264_00445 at 95.964 kb on + strand, within CA264_00445 at 95.964 kb on + strand, within CA264_00445 at 96.079 kb on + strand, within CA264_00445 at 96.079 kb on + strand, within CA264_00445 at 96.080 kb on - strand, within CA264_00445 at 96.080 kb on - strand, within CA264_00445 at 96.080 kb on - strand, within CA264_00445 at 96.090 kb on + strand, within CA264_00445 at 96.090 kb on + strand, within CA264_00445 at 96.091 kb on - strand, within CA264_00445 at 96.091 kb on - strand, within CA264_00445 at 96.091 kb on - strand, within CA264_00445 at 96.154 kb on - strand, within CA264_00445 at 96.243 kb on + strand, within CA264_00445 at 96.559 kb on + strand, within CA264_00445 at 96.583 kb on + strand, within CA264_00445 at 96.584 kb on - strand, within CA264_00445 at 96.641 kb on - strand, within CA264_00445 at 96.715 kb on + strand, within CA264_00445 at 96.715 kb on + strand, within CA264_00445 at 96.716 kb on - strand, within CA264_00445 at 96.716 kb on - strand, within CA264_00445 at 96.716 kb on - strand, within CA264_00445 at 96.742 kb on + strand, within CA264_00445 at 96.749 kb on - strand, within CA264_00445 at 96.793 kb on + strand, within CA264_00445 at 96.793 kb on + strand, within CA264_00445 at 96.794 kb on - strand, within CA264_00445 at 96.805 kb on + strand, within CA264_00445 at 96.805 kb on + strand, within CA264_00445 at 96.805 kb on + strand, within CA264_00445 at 96.805 kb on + strand, within CA264_00445 at 96.806 kb on - strand, within CA264_00445 at 96.806 kb on - strand, within CA264_00445 at 96.824 kb on + strand, within CA264_00445 at 96.879 kb on + strand, within CA264_00445 at 96.952 kb on + strand, within CA264_00445 at 97.057 kb on - strand, within CA264_00445 at 97.186 kb on + strand, within CA264_00445 at 97.204 kb on + strand, within CA264_00445 at 97.205 kb on - strand, within CA264_00445 at 97.205 kb on - strand, within CA264_00445 at 97.321 kb on + strand at 97.321 kb on + strand at 97.322 kb on - strand at 97.322 kb on - strand at 97.323 kb on + strand at 97.324 kb on - strand at 97.371 kb on - strand at 97.485 kb on + strand at 97.485 kb on + strand at 97.486 kb on - strand at 97.551 kb on - strand at 97.551 kb on - strand at 97.552 kb on + strand at 97.552 kb on + strand at 97.621 kb on + strand at 97.622 kb on - strand at 97.629 kb on + strand at 97.630 kb on - strand at 97.659 kb on + strand at 97.660 kb on - strand at 97.683 kb on - strand at 98.514 kb on + strand, within CA264_00455
Per-strain Table
Position Strand Gene LocusTag Fraction m.b. Cephalothin 0.005 mg/ml remove 94,808 + +0.6 94,808 + +0.1 94,919 + +0.3 94,926 + +0.9 94,947 + +0.5 94,948 - +2.1 94,971 + +0.6 94,972 - -1.0 94,974 - -0.6 94,977 + +0.4 94,977 + -0.3 94,977 + +1.1 94,978 - -1.7 94,978 - -0.6 95,075 + +0.0 95,076 - -0.8 95,177 - +0.3 95,180 + +1.9 95,181 - +0.2 95,226 - +0.7 95,256 - -1.4 95,291 - +0.2 95,310 + +1.6 95,401 + +0.4 95,401 + +0.8 95,402 - +0.1 95,402 - -1.9 95,402 - -0.3 95,412 + +1.5 95,424 + +1.5 95,510 - -1.2 95,534 - -1.4 95,624 + -2.6 95,625 - -1.2 95,662 + -0.3 95,663 - -0.8 95,683 + +0.0 95,684 - -1.5 95,684 - -1.1 95,684 - -0.3 95,694 - -1.0 95,694 - -0.9 95,729 - CA264_00445 0.10 -1.2 95,731 + CA264_00445 0.10 -0.1 95,731 + CA264_00445 0.10 -0.4 95,731 + CA264_00445 0.10 +1.0 95,743 - CA264_00445 0.11 +0.7 95,743 - CA264_00445 0.11 -0.1 95,779 + CA264_00445 0.13 +0.3 95,831 - CA264_00445 0.15 -0.5 95,959 + CA264_00445 0.22 -1.2 95,964 + CA264_00445 0.22 -0.0 95,964 + CA264_00445 0.22 -0.2 96,079 + CA264_00445 0.28 +1.5 96,079 + CA264_00445 0.28 +1.2 96,080 - CA264_00445 0.28 -0.1 96,080 - CA264_00445 0.28 -1.0 96,080 - CA264_00445 0.28 -2.0 96,090 + CA264_00445 0.28 -0.9 96,090 + CA264_00445 0.28 -0.0 96,091 - CA264_00445 0.28 +0.1 96,091 - CA264_00445 0.28 -0.2 96,091 - CA264_00445 0.28 -1.5 96,154 - CA264_00445 0.31 -0.3 96,243 + CA264_00445 0.36 -0.7 96,559 + CA264_00445 0.52 -0.8 96,583 + CA264_00445 0.53 -0.4 96,584 - CA264_00445 0.53 -0.1 96,641 - CA264_00445 0.56 +0.3 96,715 + CA264_00445 0.60 +0.3 96,715 + CA264_00445 0.60 +1.4 96,716 - CA264_00445 0.60 -0.2 96,716 - CA264_00445 0.60 -0.7 96,716 - CA264_00445 0.60 -1.5 96,742 + CA264_00445 0.61 +0.1 96,749 - CA264_00445 0.61 -0.5 96,793 + CA264_00445 0.64 -0.0 96,793 + CA264_00445 0.64 -0.1 96,794 - CA264_00445 0.64 -1.7 96,805 + CA264_00445 0.64 -0.3 96,805 + CA264_00445 0.64 +0.7 96,805 + CA264_00445 0.64 -0.8 96,805 + CA264_00445 0.64 -0.9 96,806 - CA264_00445 0.64 -0.7 96,806 - CA264_00445 0.64 -1.2 96,824 + CA264_00445 0.65 +1.4 96,879 + CA264_00445 0.68 +0.4 96,952 + CA264_00445 0.72 +0.1 97,057 - CA264_00445 0.77 -0.6 97,186 + CA264_00445 0.83 -0.3 97,204 + CA264_00445 0.84 +0.9 97,205 - CA264_00445 0.84 -0.2 97,205 - CA264_00445 0.84 +0.1 97,321 + -0.3 97,321 + +0.5 97,322 - -1.0 97,322 - -0.1 97,323 + -0.0 97,324 - -0.6 97,371 - -0.0 97,485 + +0.9 97,485 + +0.1 97,486 - -0.7 97,551 - +0.2 97,551 - -1.6 97,552 + -0.6 97,552 + +0.3 97,621 + -0.3 97,622 - -1.6 97,629 + -2.8 97,630 - -0.7 97,659 + +2.1 97,660 - -1.0 97,683 - -0.9 98,514 + CA264_00455 0.22 +1.7
Or see this region's nucleotide sequence