Strain Fitness in Echinicola vietnamensis KMM 6221, DSM 17526 around Echvi_3775

Experiment: L-Rhamnose (C)

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	L-Rhamnose (C)
4,498,448	+		Echvi_3773	0.72	-0.3
4,498,449	-		Echvi_3773	0.73	-0.3
4,498,449	-		Echvi_3773	0.73	+0.7
4,498,449	-		Echvi_3773	0.73	-0.3
4,498,449	-		Echvi_3773	0.73	-1.1
4,498,449	-		Echvi_3773	0.73	+1.3
4,498,449	-		Echvi_3773	0.73	-0.1
4,498,452	+		Echvi_3773	0.76	-2.6
4,498,452	+		Echvi_3773	0.76	+0.3
4,498,452	+		Echvi_3773	0.76	+2.3
4,498,453	-		Echvi_3773	0.77	+0.2
4,498,453	-		Echvi_3773	0.77	+2.5
4,498,453	-		Echvi_3773	0.77	-1.1
4,498,453	-		Echvi_3773	0.77	-0.0
4,498,475	+				-1.9
4,498,476	-				-0.9
4,498,480	-				+0.2
4,498,480	-				-0.1
4,498,509	-				-0.4
4,498,570	+				-1.7
4,498,593	-				-1.3
4,498,651	-				-0.9
4,498,672	+				+0.2
4,498,673	-				+0.0
4,498,673	-				-0.5
4,498,760	+		Echvi_3774	0.13	+0.7
4,498,760	+		Echvi_3774	0.13	-1.3
4,498,760	+		Echvi_3774	0.13	-0.9
4,498,760	+		Echvi_3774	0.13	-0.5
4,498,761	-		Echvi_3774	0.13	-0.1
4,498,761	-		Echvi_3774	0.13	-0.3
4,498,804	+		Echvi_3774	0.20	-2.1
4,498,805	-		Echvi_3774	0.20	-0.6
4,498,941	+		Echvi_3774	0.41	-0.3
4,498,967	+		Echvi_3774	0.46	-0.1
4,498,967	+		Echvi_3774	0.46	+0.4
4,498,967	+		Echvi_3774	0.46	-0.5
4,498,968	-		Echvi_3774	0.46	-0.3
4,499,093	+		Echvi_3774	0.66	-0.2
4,499,135	+		Echvi_3774	0.72	+0.4
4,499,135	+		Echvi_3774	0.72	-1.3
4,499,136	-		Echvi_3774	0.73	-3.1
4,499,199	+		Echvi_3774	0.83	+0.6
4,499,200	-		Echvi_3774	0.83	-0.9
4,499,200	-		Echvi_3774	0.83	-1.1
4,499,202	+		Echvi_3774	0.83	-0.3
4,499,227	+		Echvi_3774	0.87	+0.3
4,499,228	-		Echvi_3774	0.87	+1.7
4,499,228	-		Echvi_3774	0.87	-0.2
4,499,230	-		Echvi_3774	0.88	+0.9
4,499,248	+				-1.6
4,499,249	-				-1.6
4,499,330	+				+1.4
4,499,360	-				-0.4
4,499,404	+				-0.4
4,499,404	+				+1.1
4,499,405	-				-0.1
4,499,410	-				+1.3
4,499,531	+				-0.9
4,499,531	+				-2.4
4,499,581	-		Echvi_3775	0.12	-1.0
4,499,581	-		Echvi_3775	0.12	+1.0
4,499,748	+		Echvi_3775	0.23	-0.9
4,499,839	-		Echvi_3775	0.28	-0.1
4,499,839	-		Echvi_3775	0.28	+1.5
4,499,879	+		Echvi_3775	0.31	+1.7
4,499,879	+		Echvi_3775	0.31	-0.4
4,499,880	-		Echvi_3775	0.31	+0.2
4,499,880	-		Echvi_3775	0.31	-1.2
4,499,895	+		Echvi_3775	0.32	-0.1
4,499,924	+		Echvi_3775	0.33	+0.4
4,499,925	-		Echvi_3775	0.34	+2.3
4,499,929	-		Echvi_3775	0.34	-1.0
4,500,030	+		Echvi_3775	0.40	+0.8
4,500,030	+		Echvi_3775	0.40	-0.8
4,500,030	+		Echvi_3775	0.40	-0.0
4,500,030	+		Echvi_3775	0.40	-0.1
4,500,031	-		Echvi_3775	0.40	+0.2
4,500,031	-		Echvi_3775	0.40	-1.0
4,500,033	+		Echvi_3775	0.40	-0.4
4,500,065	-		Echvi_3775	0.42	-0.6
4,500,110	+		Echvi_3775	0.45	+0.9
4,500,289	+		Echvi_3775	0.56	-0.9
4,500,289	+		Echvi_3775	0.56	+0.6
4,500,289	+		Echvi_3775	0.56	-0.6
4,500,289	+		Echvi_3775	0.56	-1.0
4,500,289	+				+1.1
4,500,290	-		Echvi_3775	0.56	+1.1
4,500,290	-		Echvi_3775	0.56	+0.1
4,500,290	-		Echvi_3775	0.56	-1.3
4,500,290	-		Echvi_3775	0.56	-0.4
4,500,290	-		Echvi_3775	0.56	-0.0
4,500,290	-		Echvi_3775	0.56	-0.3
4,500,290	-		Echvi_3775	0.56	-1.7
4,500,290	-		Echvi_3775	0.56	-0.4
4,500,300	+		Echvi_3775	0.56	-0.6
4,500,331	-		Echvi_3775	0.58	+1.5
4,500,331	-		Echvi_3775	0.58	-2.0
4,500,331	-		Echvi_3775	0.58	-2.0
4,500,333	-		Echvi_3775	0.58	-0.5
4,500,405	+		Echvi_3775	0.63	-0.7
4,500,420	+		Echvi_3775	0.64	-1.3
4,500,421	-		Echvi_3775	0.64	-0.2
4,500,422	+		Echvi_3775	0.64	+0.4
4,500,423	-		Echvi_3775	0.64	-1.2
4,500,423	-		Echvi_3775	0.64	+0.2
4,500,423	-		Echvi_3775	0.64	-0.9
4,500,438	+		Echvi_3775	0.65	-0.9
4,500,451	-		Echvi_3775	0.66	-1.0
4,500,453	+		Echvi_3775	0.66	-1.9
4,500,453	+		Echvi_3775	0.66	-3.0
4,500,453	+		Echvi_3775	0.66	+0.1
4,500,483	+		Echvi_3775	0.68	+1.6
4,500,574	+		Echvi_3775	0.73	+1.7
4,500,575	-		Echvi_3775	0.73	+1.1
4,500,575	-		Echvi_3775	0.73	-1.2
4,500,575	-		Echvi_3775	0.73	-3.3
4,500,632	-		Echvi_3775	0.77	-0.4
4,500,675	+		Echvi_3775	0.79	+0.4
4,500,676	-		Echvi_3775	0.79	-0.3
4,500,680	+		Echvi_3775	0.80	+0.7
4,500,680	+		Echvi_3775	0.80	-0.6
4,500,681	-		Echvi_3775	0.80	-1.0
4,500,681	-		Echvi_3775	0.80	-2.1
4,500,741	-		Echvi_3775	0.83	-0.3
4,500,787	-		Echvi_3775	0.86	-0.4
4,500,790	-		Echvi_3775	0.86	-1.1
4,500,828	+		Echvi_3775	0.89	-0.6
4,500,844	-		Echvi_3775	0.90	+0.9
4,500,844	-		Echvi_3775	0.90	-0.7
4,500,861	-				-0.3
4,500,878	+				+0.7
4,500,888	-				-1.1
4,500,909	+				+2.3
4,500,909	+				+0.1
4,500,910	-				-0.4
4,500,912	+				-1.0
4,500,913	-				+1.0
4,500,965	+				+0.1
4,500,965	+				-0.1
4,500,966	-				+0.2
4,500,966	-				+0.3
4,500,966	-				+1.7
4,500,966	-				-0.2
4,500,970	+				-0.4
4,501,017	+				-0.5
4,501,069	+				+0.7
4,501,089	-				-0.8
4,501,147	-				+0.3
4,501,147	-				-1.4
4,501,147	-				+1.6
4,501,147	-				-0.5
4,501,147	-				-1.1
4,501,147	-				+0.4
4,501,251	+		Echvi_3776	0.15	+0.0
4,501,251	+		Echvi_3776	0.15	+0.4
4,501,252	-		Echvi_3776	0.15	+1.0
4,501,252	-		Echvi_3776	0.15	+2.2
4,501,261	-		Echvi_3776	0.15	+0.1
4,501,261	-		Echvi_3776	0.15	+0.2
4,501,300	+		Echvi_3776	0.18	-0.4
4,501,300	+		Echvi_3776	0.18	+0.2
4,501,306	+		Echvi_3776	0.18	-0.3
4,501,307	-		Echvi_3776	0.18	-1.1
4,501,307	-		Echvi_3776	0.18	-0.3
4,501,307	-		Echvi_3776	0.18	+0.6
4,501,307	-		Echvi_3776	0.18	-0.9
4,501,324	+		Echvi_3776	0.19	+2.1
4,501,325	-		Echvi_3776	0.19	-3.4
4,501,325	-		Echvi_3776	0.19	+0.4
4,501,473	+		Echvi_3776	0.29	-0.3
4,501,542	-		Echvi_3776	0.34	+0.2
4,501,547	-		Echvi_3776	0.34	-1.1
4,501,608	+		Echvi_3776	0.38	+1.2
4,501,608	+		Echvi_3776	0.38	-0.1
4,501,608	+		Echvi_3776	0.38	+0.1
4,501,609	-		Echvi_3776	0.38	+1.1
4,501,624	-		Echvi_3776	0.39	-0.3
4,501,626	+		Echvi_3776	0.39	-1.4
4,501,663	-		Echvi_3776	0.42	-1.4
4,501,785	+		Echvi_3776	0.50	-0.4
4,501,785	+		Echvi_3776	0.50	+1.1
4,501,785	+		Echvi_3776	0.50	-0.1
4,501,785	+		Echvi_3776	0.50	-1.6
4,501,786	-				-0.6
4,501,786	-		Echvi_3776	0.50	-1.8
4,501,797	+		Echvi_3776	0.51	-2.0
4,501,850	-		Echvi_3776	0.54	-0.1
4,502,004	+		Echvi_3776	0.64	+0.9
4,502,005	-		Echvi_3776	0.64	-0.1