Strain Fitness in Echinicola vietnamensis KMM 6221, DSM 17526 around Echvi_3763

Experiment: L-Rhamnose (C)

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	L-Rhamnose (C)
4,486,915	-				+0.1
4,486,942	+				-0.7
4,486,942	+				+0.8
4,486,942	+				-1.4
4,486,955	+				+0.8
4,486,956	-				+0.2
4,486,979	+				+0.3
4,486,980	-				-0.8
4,486,998	+				+0.1
4,486,999	-				-0.1
4,486,999	-				+1.7
4,487,210	+		Echvi_3762	0.17	+0.1
4,487,229	+		Echvi_3762	0.19	+0.7
4,487,230	-		Echvi_3762	0.19	-0.0
4,487,255	+		Echvi_3762	0.22	-0.9
4,487,350	+		Echvi_3762	0.34	-0.6
4,487,354	+		Echvi_3762	0.34	+1.0
4,487,354	+		Echvi_3762	0.34	+0.0
4,487,355	-		Echvi_3762	0.34	-0.1
4,487,355	-		Echvi_3762	0.34	+1.1
4,487,363	+		Echvi_3762	0.35	-0.9
4,487,431	+		Echvi_3762	0.43	+0.7
4,487,576	+		Echvi_3762	0.61	+2.4
4,487,577	-		Echvi_3762	0.61	+1.1
4,487,577	-		Echvi_3762	0.61	+1.0
4,487,577	-		Echvi_3762	0.61	+0.4
4,487,577	-		Echvi_3762	0.61	+1.4
4,487,581	-				-0.3
4,487,581	-		Echvi_3762	0.61	+0.7
4,487,710	-		Echvi_3762	0.77	-0.6
4,487,765	-		Echvi_3762	0.83	-0.8
4,487,765	-		Echvi_3762	0.83	+2.0
4,487,794	+		Echvi_3762	0.87	+0.1
4,487,807	+		Echvi_3762	0.88	-0.4
4,487,807	+		Echvi_3762	0.88	+0.4
4,487,883	+				-1.4
4,487,884	-				+0.2
4,487,886	+				+0.9
4,487,887	-				+0.1
4,487,895	-				-0.8
4,487,949	+				+0.1
4,487,949	+				-0.1
4,487,959	+				+0.2
4,487,959	+				+1.5
4,487,960	-				-1.9
4,487,988	-				-0.7
4,487,990	+				+0.5
4,487,990	+				-0.5
4,487,991	-				+0.4
4,487,991	-				+0.2
4,488,018	+		Echvi_3763	0.13	+0.3
4,488,018	+		Echvi_3763	0.13	+1.7
4,488,111	-		Echvi_3763	0.23	+0.5
4,488,112	+		Echvi_3763	0.23	-0.6
4,488,136	+		Echvi_3763	0.26	+0.9
4,488,136	+		Echvi_3763	0.26	+2.4
4,488,136	+		Echvi_3763	0.26	-0.6
4,488,137	-		Echvi_3763	0.26	-0.7
4,488,137	-		Echvi_3763	0.26	-1.1
4,488,150	+		Echvi_3763	0.28	-0.1
4,488,154	+		Echvi_3763	0.28	-1.8
4,488,154	+		Echvi_3763	0.28	-2.2
4,488,154	+		Echvi_3763	0.28	-0.3
4,488,187	+		Echvi_3763	0.32	+0.1
4,488,187	+		Echvi_3763	0.32	-0.8
4,488,187	+		Echvi_3763	0.32	+0.2
4,488,206	+		Echvi_3763	0.34	-0.5
4,488,206	+		Echvi_3763	0.34	+1.1
4,488,207	-		Echvi_3763	0.34	-0.3
4,488,207	-		Echvi_3763	0.34	+0.7
4,488,239	+		Echvi_3763	0.38	-0.1
4,488,240	-		Echvi_3763	0.38	+1.7
4,488,240	-		Echvi_3763	0.38	+0.9
4,488,240	-		Echvi_3763	0.38	+1.0
4,488,240	-		Echvi_3763	0.38	+0.5
4,488,240	-		Echvi_3763	0.38	+1.2
4,488,241	+		Echvi_3763	0.38	+1.4
4,488,242	-		Echvi_3763	0.39	-1.1
4,488,242	-		Echvi_3763	0.39	-0.5
4,488,277	-		Echvi_3763	0.43	-2.0
4,488,284	+		Echvi_3763	0.43	-1.4
4,488,317	-		Echvi_3763	0.47	-2.6
4,488,317	-		Echvi_3763	0.47	+0.5
4,488,325	+		Echvi_3763	0.48	-1.1
4,488,325	+		Echvi_3763	0.48	-0.2
4,488,327	+		Echvi_3763	0.48	+1.0
4,488,327	+		Echvi_3763	0.48	+1.0
4,488,327	+		Echvi_3763	0.48	-2.7
4,488,328	-		Echvi_3763	0.48	+0.5
4,488,328	-		Echvi_3763	0.48	-0.2
4,488,328	-		Echvi_3763	0.48	+0.7
4,488,328	-		Echvi_3763	0.48	-0.7
4,488,329	+		Echvi_3763	0.49	-0.3
4,488,329	+		Echvi_3763	0.49	+0.4
4,488,330	-		Echvi_3763	0.49	-0.1
4,488,333	+		Echvi_3763	0.49	-0.2
4,488,334	-		Echvi_3763	0.49	-1.3
4,488,341	+		Echvi_3763	0.50	+1.9
4,488,364	+		Echvi_3763	0.53	-0.8
4,488,369	+		Echvi_3763	0.53	-0.4
4,488,427	+		Echvi_3763	0.60	-0.1
4,488,489	+		Echvi_3763	0.67	+1.2
4,488,490	-		Echvi_3763	0.67	+1.1
4,488,509	-		Echvi_3763	0.69	+1.4
4,488,550	-		Echvi_3763	0.74	-0.4
4,488,571	-		Echvi_3763	0.77	+1.2
4,488,586	+		Echvi_3763	0.78	-0.7
4,488,606	+		Echvi_3763	0.81	+0.8
4,488,618	+		Echvi_3763	0.82	+1.5
4,488,632	-		Echvi_3763	0.84	+1.5
4,488,702	+				-0.1
4,488,736	+				+0.2
4,488,768	+				-0.8
4,488,768	+				-2.1
4,488,769	-				-0.1
4,488,769	-				-2.4
4,488,769	-				+0.5
4,488,770	+				+0.2
4,488,770	+				-1.0
4,488,771	-				+0.5
4,488,798	+				-1.6
4,488,931	+		Echvi_3764	0.39	+1.6
4,488,932	-		Echvi_3764	0.39	+1.5
4,489,125	-		Echvi_3764	0.86	+1.0
4,489,235	+		Echvi_3765	0.63	+0.1
4,489,236	-		Echvi_3765	0.65	-1.8
4,489,246	+		Echvi_3765	0.75	-0.4
4,489,247	-		Echvi_3765	0.76	+0.9
4,489,247	-		Echvi_3765	0.76	-0.4
4,489,248	+		Echvi_3765	0.77	-3.0
4,489,248	+		Echvi_3765	0.77	-0.1
4,489,248	+		Echvi_3765	0.77	+2.0
4,489,249	-		Echvi_3765	0.78	+0.1
4,489,249	-		Echvi_3765	0.78	+1.7
4,489,249	-		Echvi_3765	0.78	-0.2
4,489,249	-		Echvi_3765	0.78	-0.7
4,489,267	-				-0.3
4,489,356	+		Echvi_3766	0.15	+1.9
4,489,386	-		Echvi_3766	0.19	-0.2
4,489,391	+		Echvi_3766	0.20	+0.2
4,489,392	-		Echvi_3766	0.20	+0.2
4,489,392	-		Echvi_3766	0.20	-0.3
4,489,443	-		Echvi_3766	0.28	-0.8
4,489,446	+				+0.7
4,489,446	+		Echvi_3766	0.28	-0.5
4,489,446	+		Echvi_3766	0.28	+1.7
4,489,447	-		Echvi_3766	0.28	+0.3
4,489,466	+		Echvi_3766	0.31	+0.8
4,489,488	+		Echvi_3766	0.35	+0.9
4,489,489	-		Echvi_3766	0.35	+1.7
4,489,495	-		Echvi_3766	0.36	+1.2
4,489,534	+		Echvi_3766	0.41	-0.0
4,489,535	-		Echvi_3766	0.41	+0.7
4,489,535	-		Echvi_3766	0.41	+0.4
4,489,535	-		Echvi_3766	0.41	+0.9
4,489,536	+		Echvi_3766	0.42	-0.3
4,489,537	-		Echvi_3766	0.42	+0.9
4,489,570	-		Echvi_3766	0.47	-1.1
4,489,570	-		Echvi_3766	0.47	+0.7
4,489,611	+		Echvi_3766	0.53	-1.9
4,489,614	-		Echvi_3766	0.53	+2.2
4,489,614	-		Echvi_3766	0.53	+1.7
4,489,649	-		Echvi_3766	0.58	+0.2
4,489,658	+		Echvi_3766	0.60	+0.5
4,489,658	+		Echvi_3766	0.60	+1.0
4,489,659	-		Echvi_3766	0.60	+2.3
4,489,669	-		Echvi_3766	0.61	+0.1
4,489,682	-		Echvi_3766	0.63	-1.3
4,489,682	-		Echvi_3766	0.63	+2.1
4,489,691	+		Echvi_3766	0.65	+0.7
4,489,691	+		Echvi_3766	0.65	-0.3
4,489,696	+		Echvi_3766	0.65	-1.8
4,489,717	+		Echvi_3766	0.68	-1.6
4,489,764	+		Echvi_3766	0.75	+1.4