Strain Fitness in Echinicola vietnamensis KMM 6221, DSM 17526 around Echvi_3501

Experiment: L-Rhamnose (C)

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	L-Rhamnose (C)
4,149,023	-		Echvi_3500	0.71	-1.3
4,149,023	-		Echvi_3500	0.71	-2.0
4,149,023	-		Echvi_3500	0.71	-0.9
4,149,023	-		Echvi_3500	0.71	+0.1
4,149,023	-		Echvi_3500	0.71	+0.6
4,149,205	-		Echvi_3500	0.77	-1.2
4,149,207	+		Echvi_3500	0.77	+0.7
4,149,207	+		Echvi_3500	0.77	+0.3
4,149,208	-		Echvi_3500	0.77	+0.1
4,149,268	+		Echvi_3500	0.79	-1.0
4,149,268	+		Echvi_3500	0.79	-1.0
4,149,269	-		Echvi_3500	0.79	-0.9
4,149,305	-		Echvi_3500	0.80	+0.5
4,149,305	-		Echvi_3500	0.80	+0.3
4,149,305	-		Echvi_3500	0.80	-0.1
4,149,305	-		Echvi_3500	0.80	-0.6
4,149,305	-		Echvi_3500	0.80	-0.2
4,149,305	-		Echvi_3500	0.80	-0.5
4,149,305	-		Echvi_3500	0.80	-0.1
4,149,310	+		Echvi_3500	0.80	-0.5
4,149,324	+		Echvi_3500	0.81	+0.7
4,149,325	-		Echvi_3500	0.81	-1.1
4,149,438	-		Echvi_3500	0.84	+0.3
4,149,438	-		Echvi_3500	0.84	-1.4
4,149,450	+		Echvi_3500	0.85	+0.7
4,149,558	+		Echvi_3500	0.88	-1.9
4,149,559	-		Echvi_3500	0.88	+1.0
4,149,560	+		Echvi_3500	0.88	-0.5
4,149,560	+		Echvi_3500	0.88	+0.0
4,149,561	-		Echvi_3500	0.88	-0.5
4,149,561	-		Echvi_3500	0.88	-1.4
4,149,604	-		Echvi_3500	0.90	+0.0
4,149,620	-				+0.1
4,149,634	-				+0.1
4,149,666	+				-1.8
4,149,690	+				+0.3
4,149,691	-				+0.2
4,149,691	-				-0.9
4,149,695	-				+0.5
4,149,704	+				+1.2
4,149,705	-				+1.5
4,149,705	-				+0.5
4,149,817	-				-0.6
4,149,829	+				-1.6
4,149,880	+				-0.6
4,149,881	-				-1.6
4,149,882	+				+0.6
4,149,882	+				+0.5
4,149,882	+				+0.7
4,149,883	-				-1.1
4,149,883	-				-0.3
4,149,897	+				-0.2
4,149,948	+				+0.1
4,149,949	-				-0.9
4,149,953	+				+0.1
4,149,953	+				-0.5
4,149,953	+				-1.3
4,149,954	-				+1.3
4,149,954	-				-0.4
4,149,956	+				-0.0
4,149,962	+				+0.4
4,149,962	+				+1.4
4,149,962	+				-0.4
4,149,962	+				-1.1
4,149,962	+				-0.2
4,149,962	+				-0.6
4,149,962	+				+0.1
4,149,962	+				-0.2
4,149,963	-				-0.3
4,149,963	-				+1.4
4,149,963	-				-2.1
4,150,027	+				+0.4
4,150,028	-				-3.4
4,150,046	+				+0.3
4,150,047	-				+1.0
4,150,060	-				+0.5
4,150,096	-				+0.5
4,150,096	-				+0.1
4,150,127	+		Echvi_3501	0.12	-0.5
4,150,128	-		Echvi_3501	0.12	+1.0
4,150,169	+		Echvi_3501	0.15	+0.0
4,150,195	+		Echvi_3501	0.16	-0.5
4,150,196	-		Echvi_3501	0.16	-0.3
4,150,235	-		Echvi_3501	0.19	+0.7
4,150,235	-		Echvi_3501	0.19	+0.7
4,150,247	-		Echvi_3501	0.19	+0.7
4,150,250	-		Echvi_3501	0.20	+1.0
4,150,250	-		Echvi_3501	0.20	-0.3
4,150,308	-		Echvi_3501	0.23	-0.2
4,150,328	+		Echvi_3501	0.24	+0.5
4,150,418	+		Echvi_3501	0.30	+1.9
4,150,419	-		Echvi_3501	0.30	-0.1
4,150,419	-		Echvi_3501	0.30	+1.6
4,150,419	-		Echvi_3501	0.30	+0.9
4,150,440	+		Echvi_3501	0.31	-0.6
4,150,594	-		Echvi_3501	0.41	+0.7
4,150,594	-		Echvi_3501	0.41	+0.8
4,150,594	-		Echvi_3501	0.41	-2.0
4,150,723	-		Echvi_3501	0.49	+0.1
4,150,738	+		Echvi_3501	0.50	+0.1
4,150,808	+		Echvi_3501	0.54	+1.6
4,150,808	+		Echvi_3501	0.54	-0.1
4,150,808	+		Echvi_3501	0.54	+0.0
4,150,808	+		Echvi_3501	0.54	-0.0
4,150,809	-		Echvi_3501	0.55	-1.3
4,150,809	-		Echvi_3501	0.55	+2.1
4,150,809	-		Echvi_3501	0.55	-0.5
4,150,809	-		Echvi_3501	0.55	-1.0
4,150,809	-		Echvi_3501	0.55	+0.2
4,150,809	-		Echvi_3501	0.55	+0.2
4,150,863	+		Echvi_3501	0.58	-2.4
4,150,863	+		Echvi_3501	0.58	+0.5
4,150,863	+		Echvi_3501	0.58	-0.9
4,150,864	-		Echvi_3501	0.58	-1.3
4,150,864	-		Echvi_3501	0.58	-2.2
4,150,864	-		Echvi_3501	0.58	+0.3
4,150,959	+		Echvi_3501	0.64	-1.4
4,150,960	-		Echvi_3501	0.64	+0.3
4,150,983	+		Echvi_3501	0.65	+0.0
4,150,984	-		Echvi_3501	0.65	-0.0
4,150,988	-		Echvi_3501	0.66	-0.6
4,150,988	-		Echvi_3501	0.66	+0.2
4,151,035	+		Echvi_3501	0.69	+2.7
4,151,035	+		Echvi_3501	0.69	+2.0
4,151,036	-		Echvi_3501	0.69	-3.4
4,151,131	+		Echvi_3501	0.75	+0.4
4,151,131	+		Echvi_3501	0.75	-0.2
4,151,131	+		Echvi_3501	0.75	-0.1
4,151,132	-		Echvi_3501	0.75	-0.5
4,151,133	+		Echvi_3501	0.75	+0.7
4,151,133	+		Echvi_3501	0.75	-0.7
4,151,133	+		Echvi_3501	0.75	-1.3
4,151,133	+		Echvi_3501	0.75	+0.4
4,151,134	-		Echvi_3501	0.75	-1.3
4,151,381	+				+1.5
4,151,394	+				-0.5
4,151,422	-				+0.8
4,151,451	+				-0.4
4,151,452	-				+0.2
4,151,452	-				+0.7
4,151,512	-				-2.1
4,151,514	+				-2.6
4,151,514	+				+0.9
4,151,533	+				-2.6
4,151,534	-				-0.4
4,151,549	-				-1.2
4,151,555	-				-1.7
4,151,555	-				+0.8
4,151,682	+				+0.0
4,151,740	-				+0.1
4,151,815	-				-0.4
4,151,815	-				-0.0
4,151,817	-				-0.2
4,151,826	+				+2.0
4,151,902	+				-0.8
4,151,902	+				+0.3
4,151,902	+				+0.8
4,151,903	-				+0.1
4,151,903	-				-1.2
4,151,903	-				+0.4
4,151,908	-				+0.8
4,152,000	+		Echvi_3502	0.15	+0.7
4,152,001	-		Echvi_3502	0.15	-0.1
4,152,011	+		Echvi_3502	0.15	+0.4
4,152,033	+		Echvi_3502	0.16	-0.9
4,152,034	-		Echvi_3502	0.17	-0.3
4,152,036	+		Echvi_3502	0.17	-0.2
4,152,036	+		Echvi_3502	0.17	-1.2
4,152,037	-		Echvi_3502	0.17	-0.2
4,152,037	-		Echvi_3502	0.17	-0.6
4,152,051	+		Echvi_3502	0.17	+1.6
4,152,088	+		Echvi_3502	0.19	-0.4
4,152,089	-		Echvi_3502	0.19	+0.0
4,152,089	-		Echvi_3502	0.19	+0.2
4,152,106	-		Echvi_3502	0.20	+1.1
4,152,112	+		Echvi_3502	0.21	-0.1
4,152,137	+		Echvi_3502	0.22	-0.6
4,152,145	+		Echvi_3502	0.22	+1.7
4,152,147	+		Echvi_3502	0.22	+0.9
4,152,187	-		Echvi_3502	0.25	-0.6
4,152,245	+		Echvi_3502	0.28	-0.8
4,152,246	-		Echvi_3502	0.28	+1.4
4,152,246	-		Echvi_3502	0.28	-2.0
4,152,246	-		Echvi_3502	0.28	-0.3
4,152,267	-		Echvi_3502	0.29	-0.3
4,152,285	+		Echvi_3502	0.30	-2.1
4,152,300	-		Echvi_3502	0.30	+1.6
4,152,363	+		Echvi_3502	0.34	-0.6
4,152,363	+		Echvi_3502	0.34	-0.6
4,152,364	-		Echvi_3502	0.34	-0.4
4,152,433	+		Echvi_3502	0.37	+1.0
4,152,433	+		Echvi_3502	0.37	+0.0
4,152,433	+		Echvi_3502	0.37	-0.6
4,152,434	-		Echvi_3502	0.38	-2.4
4,152,447	-		Echvi_3502	0.38	+0.1
4,152,447	-		Echvi_3502	0.38	-1.8
4,152,472	+		Echvi_3502	0.40	-0.5
4,152,472	+		Echvi_3502	0.40	+0.0
4,152,472	+		Echvi_3502	0.40	-0.6
4,152,472	+		Echvi_3502	0.40	-0.7
4,152,472	+		Echvi_3502	0.40	-0.4
4,152,473	-		Echvi_3502	0.40	-0.7
4,152,473	-		Echvi_3502	0.40	+0.5
4,152,473	-		Echvi_3502	0.40	+1.2
4,152,473	-		Echvi_3502	0.40	+0.3
4,152,474	+		Echvi_3502	0.40	+0.8