Strain Fitness in Echinicola vietnamensis KMM 6221, DSM 17526 around Echvi_3321

Experiment: L-Rhamnose (C)

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	L-Rhamnose (C)
3,923,225	-				+0.6
3,923,277	-				-0.1
3,923,279	+				+1.2
3,923,279	+				-4.0
3,923,280	-				+0.9
3,923,280	-				+0.5
3,923,280	-				+0.6
3,923,280	-				+0.1
3,923,301	+				+0.2
3,923,302	-				-2.7
3,923,302	-				+1.9
3,923,322	-				+0.2
3,923,353	-				-0.1
3,923,365	+				-0.9
3,923,366	-				-0.3
3,923,368	+				+0.3
3,923,399	-		Echvi_3320	0.12	-0.6
3,923,595	+		Echvi_3320	0.36	+2.1
3,923,595	+		Echvi_3320	0.36	-0.3
3,923,596	-		Echvi_3320	0.36	+1.2
3,923,684	+		Echvi_3320	0.47	-1.3
3,923,685	-		Echvi_3320	0.47	-0.5
3,923,876	-		Echvi_3320	0.70	-0.5
3,923,876	-		Echvi_3320	0.70	+0.4
3,923,878	-		Echvi_3320	0.71	-0.4
3,923,878	-		Echvi_3320	0.71	-0.8
3,923,878	-		Echvi_3320	0.71	-0.3
3,923,878	-		Echvi_3320	0.71	-0.9
3,923,878	-		Echvi_3320	0.71	+0.1
3,923,886	+		Echvi_3320	0.72	-0.0
3,923,887	-		Echvi_3320	0.72	+1.5
3,924,033	-		Echvi_3320	0.90	+0.1
3,924,160	+				+0.4
3,924,182	+				-0.8
3,924,214	+				+0.4
3,924,397	-				-0.4
3,924,397	-				+0.7
3,924,417	-				+1.3
3,924,417	-				-0.1
3,924,498	+		Echvi_3321	0.12	-0.7
3,924,499	-		Echvi_3321	0.12	+0.7
3,924,500	+		Echvi_3321	0.12	+0.2
3,924,573	-		Echvi_3321	0.15	-1.8
3,924,605	-		Echvi_3321	0.17	+1.3
3,924,606	+		Echvi_3321	0.17	+0.4
3,924,607	-		Echvi_3321	0.17	-1.1
3,924,607	-		Echvi_3321	0.17	+0.7
3,924,640	-		Echvi_3321	0.18	-1.8
3,924,646	-		Echvi_3321	0.18	+1.2
3,924,648	-		Echvi_3321	0.18	-0.0
3,924,781	+		Echvi_3321	0.24	+0.3
3,924,781	+		Echvi_3321	0.24	-0.5
3,924,782	-		Echvi_3321	0.24	+0.4
3,924,782	-		Echvi_3321	0.24	-0.9
3,924,782	-		Echvi_3321	0.24	+1.0
3,924,782	-		Echvi_3321	0.24	+1.0
3,924,788	-		Echvi_3321	0.24	+1.5
3,924,837	+		Echvi_3321	0.26	-1.1
3,924,838	-		Echvi_3321	0.26	-1.9
3,924,852	+		Echvi_3321	0.27	+1.7
3,924,852	+		Echvi_3321	0.27	+0.5
3,924,853	-		Echvi_3321	0.27	-1.3
3,924,853	-		Echvi_3321	0.27	-0.5
3,924,908	-		Echvi_3321	0.29	+0.6
3,924,908	-		Echvi_3321	0.29	+1.1
3,924,923	+		Echvi_3321	0.29	+0.4
3,924,924	-		Echvi_3321	0.29	+0.8
3,924,924	-		Echvi_3321	0.29	+1.0
3,924,995	-		Echvi_3321	0.32	+1.5
3,924,995	-		Echvi_3321	0.32	-0.1
3,925,093	+		Echvi_3321	0.36	-0.2
3,925,093	+		Echvi_3321	0.36	+0.3
3,925,103	+		Echvi_3321	0.37	+1.0
3,925,125	-		Echvi_3321	0.38	+0.2
3,925,136	+		Echvi_3321	0.38	+0.9
3,925,137	-		Echvi_3321	0.38	+2.3
3,925,289	+		Echvi_3321	0.44	+0.3
3,925,290	-		Echvi_3321	0.44	+0.9
3,925,301	+		Echvi_3321	0.45	-0.6
3,925,302	-		Echvi_3321	0.45	-3.8
3,925,302	-		Echvi_3321	0.45	+2.5
3,925,302	-		Echvi_3321	0.45	+1.0
3,925,304	+		Echvi_3321	0.45	-0.7
3,925,304	+		Echvi_3321	0.45	-0.2
3,925,305	-		Echvi_3321	0.45	-1.6
3,925,305	-		Echvi_3321	0.45	+0.6
3,925,305	-		Echvi_3321	0.45	+0.5
3,925,305	-		Echvi_3321	0.45	+0.4
3,925,305	-		Echvi_3321	0.45	-1.1
3,925,360	+		Echvi_3321	0.47	+1.1
3,925,454	-		Echvi_3321	0.51	+0.0
3,925,520	+		Echvi_3321	0.54	+0.4
3,925,521	-		Echvi_3321	0.54	+1.7
3,925,521	-		Echvi_3321	0.54	+0.7
3,925,669	-		Echvi_3321	0.60	+0.7
3,925,683	+		Echvi_3321	0.60	-0.3
3,925,683	+		Echvi_3321	0.60	+0.1
3,925,696	-		Echvi_3321	0.61	+2.2
3,925,799	-		Echvi_3321	0.65	-0.5
3,925,836	+		Echvi_3321	0.67	-1.5
3,925,836	+		Echvi_3321	0.67	-0.9
3,925,836	+		Echvi_3321	0.67	-0.6
3,925,837	-		Echvi_3321	0.67	+1.4
3,925,837	-		Echvi_3321	0.67	+1.1
3,925,837	-		Echvi_3321	0.67	+0.0
3,925,841	+		Echvi_3321	0.67	-0.9
3,925,842	-		Echvi_3321	0.67	+1.1
3,925,951	-		Echvi_3321	0.71	+1.1
3,925,956	-		Echvi_3321	0.71	+0.3
3,926,029	-		Echvi_3321	0.74	-0.1
3,926,034	+		Echvi_3321	0.75	+0.3
3,926,034	+		Echvi_3321	0.75	-0.4
3,926,036	+		Echvi_3321	0.75	+1.3
3,926,036	+		Echvi_3321	0.75	-0.9
3,926,037	-		Echvi_3321	0.75	+1.5
3,926,037	-		Echvi_3321	0.75	+0.7
3,926,044	+		Echvi_3321	0.75	-0.2
3,926,072	+		Echvi_3321	0.76	-2.1
3,926,072	+		Echvi_3321	0.76	+0.9
3,926,072	+		Echvi_3321	0.76	+0.9
3,926,072	+		Echvi_3321	0.76	+0.6
3,926,073	-		Echvi_3321	0.76	-0.4
3,926,073	-		Echvi_3321	0.76	-1.1
3,926,077	+		Echvi_3321	0.76	-1.1
3,926,078	-		Echvi_3321	0.76	-0.4
3,926,220	+		Echvi_3321	0.82	-0.6
3,926,221	-		Echvi_3321	0.82	-0.1
3,926,248	-		Echvi_3321	0.83	-0.6
3,926,248	-		Echvi_3321	0.83	-0.3
3,926,248	-		Echvi_3321	0.83	-0.9
3,926,282	+				+0.1
3,926,283	-		Echvi_3321	0.85	+0.2
3,926,397	-		Echvi_3321	0.89	+1.1
3,926,432	-				+0.2
3,926,486	+				+1.4
3,926,605	+				+0.9
3,926,606	-				+0.2
3,926,606	-				+0.9
3,926,671	+				-1.5
3,926,671	+				-0.3
3,926,672	-				-0.2
3,926,672	-				-0.7
3,926,714	+		Echvi_3322	0.12	-0.8
3,926,714	+		Echvi_3322	0.12	-1.6
3,926,721	+		Echvi_3322	0.14	-1.1
3,926,725	+		Echvi_3322	0.15	+0.4
3,926,735	+		Echvi_3322	0.17	+1.7
3,926,735	+		Echvi_3322	0.17	+0.2
3,926,736	-		Echvi_3322	0.17	-1.4
3,926,736	-		Echvi_3322	0.17	+0.6
3,926,747	+		Echvi_3322	0.19	+1.3
3,926,750	+		Echvi_3322	0.20	+0.1
3,926,750	+		Echvi_3322	0.20	-0.7
3,926,768	+		Echvi_3322	0.24	-2.7
3,926,768	+		Echvi_3322	0.24	+0.3
3,926,768	+		Echvi_3322	0.24	+0.4
3,926,769	-		Echvi_3322	0.24	-0.8
3,926,769	-		Echvi_3322	0.24	+1.2
3,926,769	-		Echvi_3322	0.24	+1.5
3,926,769	-		Echvi_3322	0.24	-0.1
3,926,830	-		Echvi_3322	0.37	+2.9
3,926,830	-		Echvi_3322	0.37	-0.7
3,926,861	+		Echvi_3322	0.44	+0.7
3,926,862	-		Echvi_3322	0.44	+0.4
3,926,903	+		Echvi_3322	0.53	-0.7
3,926,904	-		Echvi_3322	0.53	+0.9
3,926,973	-		Echvi_3322	0.68	+2.1
3,927,012	+		Echvi_3322	0.76	+0.4
3,927,012	+		Echvi_3322	0.76	+1.7
3,927,021	+		Echvi_3322	0.78	+0.0
3,927,099	-				+0.4
3,927,101	-				+2.5
3,927,101	-				-1.3
3,927,111	-				-0.4
3,927,113	+				-1.5
3,927,114	-				+1.6
3,927,114	-				-0.3
3,927,145	-				+0.1
3,927,148	+				+0.3
3,927,148	+				-1.1
3,927,149	-				-0.1
3,927,150	+				+0.9
3,927,151	-				+1.5
3,927,152	+				+0.0
3,927,152	+				+1.2
3,927,200	+				+0.5
3,927,211	+				+0.6
3,927,211	+				+1.0
3,927,211	+				+1.1
3,927,212	-				-2.1
3,927,252	+				+0.7
3,927,322	-				-0.1
3,927,325	+				+0.5
3,927,350	+				-1.6
3,927,392	-				-0.1
3,927,396	-				+0.1
3,927,396	-				+1.3
3,927,444	+				+0.9
3,927,451	+				+0.1
3,927,472	+				+0.6
3,927,485	+				-1.4
3,927,485	+				+0.7
3,927,485	+				+2.0
3,927,539	+				-0.9
3,927,539	+				-0.6
3,927,568	-				-0.3
3,927,568	-				+1.2
3,927,637	+		Echvi_3323	0.14	-1.5
3,927,638	-		Echvi_3323	0.14	+1.4
3,927,638	-		Echvi_3323	0.14	+0.1
3,927,638	-		Echvi_3323	0.14	+0.8